AT4G03670 : -
Query Information
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AGICode AT4G03670
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G03670 transposable element gene 1 0.31 -0.3
2 AT2G35100 Exostosin family protein ARABINAN DEFICIENT 1 -0.71 0.32 -0.31
3 AT1G35790 transposable element gene -0.71 0.28 -0.31
4 AT1G15190 Fasciclin-like arabinogalactan family protein 0.71 0.33 -0.33
5 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein 0.71 0.31 -0.29
6 AT1G62950 leucine-rich repeat transmembrane protein kinase family
protein		 0.7 0.33 -0.32
7 AT3G30150 transposable element gene 0.69 0.33 -0.31
8 AT3G09620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.32 -0.31
9 AT5G41730 Protein kinase family protein -0.68 0.31 -0.34
10 AT1G32600 F-box associated ubiquitination effector family protein 0.68 0.32 -0.31
11 AT5G46660 protein kinase C-like zinc finger protein -0.68 0.34 -0.32
12 AT2G03390 uvrB/uvrC motif-containing protein 0.68 0.33 -0.3
13 AT2G31590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G04730.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.68 0.31 -0.32
14 AT4G24460 CRT (chloroquine-resistance transporter)-like transporter 2 CRT (chloroquine-resistance
transporter)-like transporter 2		 0.67 0.33 -0.31
15 AT5G08480 VQ motif-containing protein 0.65 0.33 -0.28
16 AT1G71760 unknown protein; Has 92 Blast hits to 92 proteins in 41
species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).		 0.64 0.3 -0.31
17 AT5G65170 VQ motif-containing protein -0.64 0.31 -0.31
18 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.64 0.34 -0.31
19 AT3G17440 novel plant snare 13 ATNPSN13, novel plant snare 13 0.63 0.3 -0.31
20 AT5G34895 transposable element gene 0.63 0.32 -0.32
21 AT4G09760 Protein kinase superfamily protein 0.63 0.33 -0.31
22 AT1G54840 HSP20-like chaperones superfamily protein 0.62 0.31 -0.29
23 AT1G43160 related to AP2 6 related to AP2 6 -0.62 0.33 -0.31
24 AT3G46900 copper transporter 2 copper transporter 2 0.62 0.31 -0.31
25 AT5G38870 transposable element gene 0.62 0.31 -0.31
26 AT5G01210 HXXXD-type acyl-transferase family protein -0.62 0.32 -0.34
27 AT3G15250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits
to 218 proteins in 63 species: Archae - 0; Bacteria - 22;
Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other
Eukaryotes - 93 (source: NCBI BLink).		 0.62 0.29 -0.31
28 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.3 -0.32
29 AT1G49570 Peroxidase superfamily protein -0.62 0.32 -0.33
30 AT2G44200 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA
splicing factor		 -0.62 0.33 -0.31
31 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.33 -0.32
32 AT1G71470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22090.1); Has 11 Blast hits
to 11 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.61 0.31 -0.32
33 AT1G26600 CLAVATA3/ESR-RELATED 9 CLAVATA3/ESR-RELATED 9 0.61 0.3 -0.3
34 AT5G56620 NAC domain containing protein 99 NAC domain containing protein 99,
NAC domain containing protein 99		 0.61 0.34 -0.3
35 AT1G07485 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex,
embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis,
D bilateral stage; Has 5 Blast hits to 5 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.31 -0.34
36 AT1G07160 Protein phosphatase 2C family protein -0.61 0.33 -0.33
37 AT2G20805 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT1G11510.1); Has 47 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.3 -0.31
38 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 0.6 0.3 -0.31
39 AT2G40640 RING/U-box superfamily protein 0.6 0.33 -0.32
40 AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein required for efficiency of
mitochondrial editing 1		 -0.6 0.32 -0.3
41 AT5G61470 C2H2-like zinc finger protein -0.6 0.3 -0.31
42 AT1G77310 BEST Arabidopsis thaliana protein match is:
wound-responsive family protein (TAIR:AT1G21610.1); Has 493
Blast hits to 482 proteins in 163 species: Archae - 0;
Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65;
Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink).		 0.6 0.31 -0.31
43 AT1G73177 bonsai anaphase-promoting complex 13,
BONSAI		 -0.59 0.33 -0.33
44 AT2G47230 DOMAIN OF UNKNOWN FUNCTION 724 6 DOMAIN OF UNKNOWN FUNCTION 724 6,
DOMAIN OF UNKNOWN FUNCTION 724 6		 0.59 0.31 -0.31
45 AT1G21630 Calcium-binding EF hand family protein -0.59 0.32 -0.32
46 AT2G28590 Protein kinase superfamily protein -0.59 0.33 -0.33
47 AT3G60410 Protein of unknown function (DUF1639) 0.59 0.32 -0.33
48 AT5G42910 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.59 0.3 -0.33
49 AT4G28380 Leucine-rich repeat (LRR) family protein 0.59 0.32 -0.3
50 AT5G25550 Leucine-rich repeat (LRR) family protein 0.59 0.34 -0.33
51 AT2G43840 UDP-glycosyltransferase 74 F1 UDP-glycosyltransferase 74 F1 -0.59 0.3 -0.3
52 AT4G35740 DEAD/DEAH box RNA helicase family protein A. THALIANA RECQ HELICASE 3,
RecQl3		 0.59 0.3 -0.29
53 AT2G42980 Eukaryotic aspartyl protease family protein 0.58 0.31 -0.34
54 AT5G19890 Peroxidase superfamily protein -0.58 0.31 -0.34
55 AT3G15430 Regulator of chromosome condensation (RCC1) family protein -0.58 0.3 -0.31
56 AT4G03770 transposable element gene 0.58 0.32 -0.3
57 AT1G75890 GDSL-like Lipase/Acylhydrolase superfamily protein 0.58 0.33 -0.33
58 AT4G29090 Ribonuclease H-like superfamily protein -0.58 0.32 -0.32
59 AT5G53480 ARM repeat superfamily protein -0.58 0.32 -0.29
60 AT2G31500 calcium-dependent protein kinase 24 calcium-dependent protein kinase
24		 0.57 0.3 -0.3
61 AT5G66030 Golgi-localized GRIP domain-containing protein ATGRIP, GRIP -0.57 0.33 -0.3
62 AT1G73430 sec34-like family protein -0.57 0.33 -0.33
63 AT5G58410 HEAT/U-box domain-containing protein -0.57 0.31 -0.31
64 AT1G77410 beta-galactosidase 16 beta-galactosidase 16 0.57 0.32 -0.32
65 AT2G37090 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 0.57 0.34 -0.33
66 AT1G50700 calcium-dependent protein kinase 33 calcium-dependent protein kinase
33		 -0.57 0.31 -0.31
67 AT5G47090 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2052, coiled-coil (InterPro:IPR018613);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.57 0.3 -0.32
68 AT4G25970 phosphatidylserine decarboxylase 3 phosphatidylserine decarboxylase 3 -0.57 0.31 -0.32
69 AT1G17630 Pentatricopeptide repeat (PPR-like) superfamily protein -0.57 0.31 -0.3
70 AT1G78950 Terpenoid cyclases family protein 0.57 0.34 -0.3
71 AT1G05550 Protein of unknown function (DUF295) -0.56 0.3 -0.31
72 AT1G54923 transposable element gene -0.56 0.31 -0.33
73 AT1G56620 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.56 0.31 -0.32
74 AT4G30380 Barwin-related endoglucanase -0.56 0.34 -0.31
75 AT3G25750 F-box family protein with a domain of unknown function
(DUF295)		 -0.56 0.31 -0.32
76 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 0.56 0.31 -0.31
77 AT5G07780 Actin-binding FH2 (formin homology 2) family protein 0.56 0.33 -0.32
78 AT4G00890 proline-rich family protein 0.56 0.3 -0.3
79 AT4G17980 NAC domain containing protein 71 NAC domain containing protein 71,
NAC domain containing protein 71		 0.56 0.34 -0.32
80 AT1G34510 Peroxidase superfamily protein -0.56 0.33 -0.31
81 AT4G35130 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.35 -0.31
82 AT1G13890 soluble N-ethylmaleimide-sensitive factor adaptor protein
30		 ATSNAP30, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 30		 -0.55 0.35 -0.31
83 AT4G19600 Cyclin family protein CYCT1;4 -0.55 0.3 -0.31
84 AT5G47580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 ALTERED SEED GERMINATION 7 -0.55 0.31 -0.32
85 AT5G59660 Leucine-rich repeat protein kinase family protein 0.55 0.32 -0.31
86 AT3G06160 AP2/B3-like transcriptional factor family protein 0.55 0.34 -0.33
87 AT3G56930 DHHC-type zinc finger family protein -0.55 0.33 -0.32
88 AT1G12730 GPI transamidase subunit PIG-U 0.55 0.31 -0.33
89 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3		 -0.55 0.29 -0.3
90 AT2G40130 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 0.55 0.35 -0.3
91 AT2G07320 transposable element gene -0.55 0.31 -0.31
92 AT1G64250 transposable element gene 0.55 0.32 -0.32
93 AT2G31970 DNA repair-recombination protein (RAD50) ATRAD50, RAD50 -0.55 0.33 -0.3
94 AT5G35250 transposable element gene 0.55 0.3 -0.32
95 AT1G31760 SWIB/MDM2 domain superfamily protein 0.55 0.33 -0.33
96 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.55 0.33 -0.32
97 AT1G22240 pumilio 8 pumilio 8, pumilio 8 -0.55 0.32 -0.32
98 AT1G48760 delta-adaptin delta-adaptin, PROTEIN-AFFECTED
TRAFFICKING 4		 -0.54 0.33 -0.31
99 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.54 0.32 -0.31
100 AT4G34940 armadillo repeat only 1 armadillo repeat only 1 -0.54 0.33 -0.34
101 AT3G58780 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 1, SHATTERPROOF 1 -0.54 0.35 -0.31
102 AT5G22410 root hair specific 18 root hair specific 18 -0.53 0.3 -0.29
103 AT1G68700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits
to 14 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.31 -0.31
104 ATMG01020 hypothetical protein ORF153B -0.53 0.34 -0.32
105 AT5G63320 nuclear protein X1 nuclear protein X1 -0.53 0.31 -0.32
106 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 -0.53 0.3 -0.32
107 AT1G06270 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.32 -0.36
108 AT2G27460 sec23/sec24 transport family protein -0.53 0.33 -0.32
109 AT4G26290 unknown protein; Has 9 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 4 (source: NCBI
BLink).		 -0.53 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0242 Suberic acid - - - 0.65 0.44 -0.47
111 C0175 MST_2379.9 - - - -0.63 0.42 -0.48
112 C0224 Quercetin-3-O-[6''-O-(α-rhamnosyl)β-glucoside]-7-O-α-rhamnoside Quercetin-3-O-[6''-O-(α-L-rhamnosyl)β-D-glucoside]-7-O-α-L-rhamnoside Quercetin 3-O-[6''-O-rhamnosyl)glucoside] 7-O-rhamnoside quercetin glucoside biosynthesis (Arabidopsis) -0.55 0.29 -0.31
113 C0020 1-Aminocyclopropane-1-carboxylic acid - 1-Aminocyclopropane-1-carboxylate jasmonoyl-amino acid conjugates biosynthesis I,
ethylene biosynthesis I (plants),
methionine salvage pathway 		-0.54 0.41 -0.47 C0020