AT4G03205 : hemf2
Query Information
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AGICode AT4G03205
Description Coproporphyrinogen III oxidase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G03205 Coproporphyrinogen III oxidase hemf2 1 0.31 -0.29
2 AT3G12030 Protein of unknown function DUF106, transmembrane -0.79 0.32 -0.29
3 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 0.78 0.32 -0.32
4 AT1G70620 cyclin-related 0.77 0.3 -0.29
5 AT3G57470 Insulinase (Peptidase family M16) family protein 0.76 0.31 -0.31
6 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 0.75 0.32 -0.32
7 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 0.74 0.3 -0.3
8 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.74 0.3 -0.28
9 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.74 0.3 -0.3
10 AT1G54350 ABC transporter family protein ATP-binding cassette D2 0.73 0.33 -0.31
11 AT3G43220 Phosphoinositide phosphatase family protein 0.73 0.32 -0.33
12 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 0.72 0.32 -0.32
13 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.72 0.3 -0.31
14 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 0.71 0.3 -0.32
15 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.71 0.3 -0.31
16 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 0.71 0.32 -0.3
17 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 0.71 0.32 -0.29
18 AT5G35170 adenylate kinase family protein 0.71 0.32 -0.31
19 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.31 -0.33
20 AT5G63400 adenylate kinase 1 adenylate kinase 1 -0.71 0.35 -0.31
21 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 0.71 0.3 -0.29
22 ATCG00760 ribosomal protein L36 ribosomal protein L36 0.7 0.34 -0.3
23 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.69 0.3 -0.35
24 AT4G08460 Protein of unknown function (DUF1644) -0.69 0.32 -0.32
25 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.33 -0.32
26 AT5G22720 F-box/RNI-like superfamily protein 0.69 0.31 -0.33
27 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 -0.69 0.34 -0.33
28 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 0.69 0.29 -0.32
29 AT5G65930 kinesin-like calmodulin-binding protein (ZWICHEL) KINESIN-LIKE CALMODULIN-BINDING
PROTEIN, POTATO KINESIN-LIKE
CALMODULIN-BINDING PROTEIN,
ZWICHEL		 0.69 0.32 -0.32
30 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 -0.69 0.32 -0.31
31 AT2G02780 Leucine-rich repeat protein kinase family protein 0.68 0.32 -0.3
32 AT5G16180 ortholog of maize chloroplast splicing factor CRS1 ARABIDOPSIS ORTHOLOG OF MAIZE
CHLOROPLAST SPLICING FACTOR CRS1,
ortholog of maize chloroplast
splicing factor CRS1		 0.68 0.32 -0.32
33 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.68 0.3 -0.32
34 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.33 -0.3
35 AT3G50240 ATP binding microtubule motor family protein KICP-02 0.68 0.31 -0.31
36 AT4G18130 phytochrome E phytochrome E 0.68 0.33 -0.32
37 AT5G20220 zinc knuckle (CCHC-type) family protein 0.68 0.32 -0.33
38 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 0.68 0.28 -0.32
39 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.67 0.29 -0.33
40 AT5G13980 Glycosyl hydrolase family 38 protein 0.67 0.32 -0.31
41 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 0.67 0.31 -0.33
42 AT2G41810 Protein of unknown function, DUF642 -0.67 0.32 -0.3
43 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 0.67 0.32 -0.3
44 AT1G18480 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP2, Shewenella-like protein
phosphatase 2		 -0.66 0.28 -0.32
45 AT5G40200 DegP protease 9 DegP protease 9 -0.66 0.3 -0.31
46 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.3 -0.31
47 AT1G67140 HEAT repeat-containing protein SWEETIE 0.66 0.31 -0.32
48 AT4G14510 CRM family member 3B ATCFM3B, CRM family member 3B 0.66 0.32 -0.31
49 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 0.66 0.33 -0.3
50 AT5G19680 Leucine-rich repeat (LRR) family protein -0.66 0.35 -0.32
51 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.32 -0.31
52 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.65 0.29 -0.31
53 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein 0.65 0.32 -0.33
54 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 0.65 0.31 -0.31
55 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.65 0.31 -0.32
56 AT5G02670 BEST Arabidopsis thaliana protein match is: poly(A)
polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.65 0.33 -0.29
57 AT1G03550 Secretory carrier membrane protein (SCAMP) family protein 0.65 0.31 -0.32
58 AT3G33530 Transducin family protein / WD-40 repeat family protein 0.65 0.32 -0.34
59 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 -0.65 0.32 -0.32
60 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.64 0.36 -0.31
61 AT1G76260 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 DWD (DDB1-binding WD40 protein)
hypersensitive to ABA 2		 -0.64 0.32 -0.31
62 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.64 0.31 -0.3
63 AT2G42330 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.64 0.31 -0.34
64 AT1G01010 NAC domain containing protein 1 NAC domain containing protein 1,
NAC domain containing protein 1		 -0.64 0.31 -0.33
65 AT2G42270 U5 small nuclear ribonucleoprotein helicase 0.64 0.32 -0.33
66 AT2G30000 PHF5-like protein -0.64 0.32 -0.33
67 AT5G67220 FMN-linked oxidoreductases superfamily protein -0.64 0.33 -0.32
68 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.64 0.32 -0.3
69 AT2G25660 embryo defective 2410 embryo defective 2410 0.64 0.29 -0.31
70 AT1G74840 Homeodomain-like superfamily protein -0.64 0.3 -0.3
71 AT5G49555 FAD/NAD(P)-binding oxidoreductase family protein 0.64 0.32 -0.32
72 AT3G12370 Ribosomal protein L10 family protein -0.64 0.33 -0.34
73 AT5G39580 Peroxidase superfamily protein -0.63 0.32 -0.3
74 AT1G19360 Nucleotide-diphospho-sugar transferase family protein reduced residual arabinose 3 -0.63 0.32 -0.3
75 ATCG00800 structural constituent of ribosome 0.63 0.28 -0.3
76 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.63 0.34 -0.31
77 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.31 -0.32
78 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.63 0.31 -0.32
79 AT2G20330 Transducin/WD40 repeat-like superfamily protein -0.63 0.3 -0.32
80 AT5G01510 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 5 0.63 0.31 -0.3
81 AT4G24040 trehalase 1 ATTRE1, trehalase 1 -0.63 0.32 -0.34
82 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.63 0.32 -0.3
83 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 -0.63 0.31 -0.31
84 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 -0.63 0.31 -0.32
85 AT1G68200 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.63 0.31 -0.32
86 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.63 0.32 -0.33
87 AT1G61500 S-locus lectin protein kinase family protein 0.62 0.33 -0.31
88 AT2G20460 transposable element gene 0.62 0.3 -0.34
89 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.62 0.3 -0.31
90 AT2G17975 zinc finger (Ran-binding) family protein 0.62 0.33 -0.32
91 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.62 0.33 -0.3
92 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 0.62 0.31 -0.35
93 AT1G22860 Vacuolar sorting protein 39 0.62 0.32 -0.31
94 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.62 0.3 -0.32
95 AT1G61620 phosphoinositide binding -0.62 0.33 -0.32
96 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.62 0.31 -0.31
97 AT1G19485 Transducin/WD40 repeat-like superfamily protein 0.62 0.31 -0.3
98 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.34 -0.31
99 AT5G18420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2363
(InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.61 0.32 -0.3
100 AT5G64120 Peroxidase superfamily protein -0.61 0.32 -0.33
101 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.61 0.31 -0.3
102 AT3G28200 Peroxidase superfamily protein -0.61 0.32 -0.31
103 AT2G42910 Phosphoribosyltransferase family protein -0.61 0.32 -0.31
104 AT2G36810 ARM repeat superfamily protein 0.61 0.3 -0.31
105 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.61 0.33 -0.33
106 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.61 0.31 -0.31
107 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 0.61 0.34 -0.3
108 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.33 -0.3
109 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.61 0.33 -0.33
110 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.61 0.32 -0.3
111 AT1G52200 PLAC8 family protein -0.61 0.31 -0.31
112 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 -0.6 0.32 -0.32
113 AT1G53460 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF
zinc finger-like superfamily protein (TAIR:AT1G70650.2);
Has 485 Blast hits to 413 proteins in 88 species: Archae -
11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101;
Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).		 -0.6 0.32 -0.33
114 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 -0.6 0.31 -0.31
115 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein -0.6 0.29 -0.32
116 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 -0.6 0.32 -0.31
117 AT2G36320 A20/AN1-like zinc finger family protein -0.59 0.32 -0.32
118 AT5G45280 Pectinacetylesterase family protein -0.59 0.34 -0.35
119 AT1G29160 Dof-type zinc finger DNA-binding family protein -0.59 0.33 -0.29
120 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.59 0.33 -0.31
121 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.59 0.31 -0.33
122 AT3G59920 RAB GDP dissociation inhibitor 2 RAB GDP dissociation inhibitor 2,
RAB GDP dissociation inhibitor 2		 -0.59 0.31 -0.29
123 AT5G13450 delta subunit of Mt ATP synthase delta subunit of Mt ATP synthase -0.58 0.29 -0.3
124 AT2G35910 RING/U-box superfamily protein -0.58 0.31 -0.32
125 AT5G08335 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE B,
ATSTE14B, ISOPRENYL CYSTEINE
METHYLTRANSFERASE B		 -0.58 0.31 -0.33
126 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 -0.58 0.3 -0.33
127 AT4G17640 casein kinase II beta chain 2 casein kinase II beta chain 2 -0.58 0.33 -0.32
128 AT5G62740 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 ATHIR1, AtHIR4,
HYPERSENSITIVE-INDUCED RESPONSE
PROTEIN 1, hypersensitive induced
reaction 4		 -0.57 0.35 -0.33
129 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.57 0.33 -0.3
130 AT4G02810 Protein of unknown function (DUF3049) FANTASTIC FOUR 1 -0.57 0.32 -0.32
131 AT4G14410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 104 -0.57 0.31 -0.34
132 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 -0.57 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
133 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.8 0.44 -0.46 C0010
134 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.71 0.46 -0.41 C0003