AT4G03120 : -
Query Information
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AGICode AT4G03120
Description C2H2 and C2HC zinc fingers superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein 1 0.31 -0.32
2 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 0.86 0.34 -0.29
3 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.82 0.31 -0.29
4 AT5G58290 regulatory particle triple-A ATPase 3 regulatory particle triple-A
ATPase 3		 0.81 0.32 -0.32
5 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 -0.8 0.33 -0.33
6 AT3G05530 regulatory particle triple-A ATPase 5A ATS6A.2, regulatory particle
triple-A ATPase 5A		 0.8 0.34 -0.32
7 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.78 0.33 -0.31
8 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.78 0.31 -0.32
9 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.78 0.33 -0.32
10 AT4G15900 pleiotropic regulatory locus 1 pleiotropic regulatory locus 1 0.78 0.3 -0.29
11 AT3G03950 evolutionarily conserved C-terminal region 1 evolutionarily conserved
C-terminal region 1		 0.78 0.31 -0.33
12 AT3G20800 Cell differentiation, Rcd1-like protein 0.77 0.31 -0.33
13 AT4G37550 Acetamidase/Formamidase family protein -0.76 0.32 -0.31
14 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 0.76 0.3 -0.32
15 AT3G09840 cell division cycle 48 ATCDC48, cell division cycle 48,
CDC48A		 0.76 0.33 -0.32
16 AT5G15640 Mitochondrial substrate carrier family protein 0.76 0.33 -0.31
17 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.76 0.3 -0.31
18 AT4G31340 myosin heavy chain-related 0.76 0.32 -0.34
19 AT3G12570 FYD FYD 0.76 0.31 -0.32
20 AT2G24280 alpha/beta-Hydrolases superfamily protein -0.76 0.31 -0.32
21 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.76 0.31 -0.32
22 AT1G10390 Nucleoporin autopeptidase 0.75 0.31 -0.33
23 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.75 0.31 -0.3
24 AT3G19630 Radical SAM superfamily protein 0.75 0.3 -0.3
25 AT2G36300 Integral membrane Yip1 family protein 0.75 0.34 -0.31
26 AT5G43460 HR-like lesion-inducing protein-related 0.74 0.33 -0.32
27 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.33 -0.33
28 AT3G56850 ABA-responsive element binding protein 3 ABA-responsive element binding
protein 3, DPBF3		 0.74 0.32 -0.29
29 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 0.74 0.32 -0.31
30 AT1G02000 UDP-D-glucuronate 4-epimerase 2 UDP-D-glucuronate 4-epimerase 2 0.74 0.31 -0.34
31 AT1G04750 vesicle-associated membrane protein 721 AT VAMP7B, ATVAMP721,
vesicle-associated membrane
protein 721, VESICLE-ASSOCIATED
MEMBRANE PROTEIN 7B		 0.74 0.31 -0.32
32 AT4G39880 Ribosomal protein L23/L15e family protein 0.74 0.3 -0.33
33 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS32, PHOS32 0.74 0.3 -0.31
34 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.73 0.32 -0.31
35 AT4G01390 TRAF-like family protein -0.73 0.33 -0.32
36 AT1G03070 Bax inhibitor-1 family protein -0.73 0.31 -0.32
37 AT4G23040 Ubiquitin-like superfamily protein 0.73 0.33 -0.3
38 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 0.73 0.33 -0.29
39 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.34 -0.32
40 AT2G15050 lipid transfer protein lipid transfer protein, lipid
transfer protein 7		 -0.73 0.32 -0.31
41 AT5G62640 proline-rich family protein AtELF5, EARLY FLOWERING 5 0.73 0.32 -0.29
42 AT3G28080 nodulin MtN21 /EamA-like transporter family protein -0.73 0.32 -0.32
43 AT3G04780 Protein of unknown function (DUF1000) 0.72 0.31 -0.33
44 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 0.72 0.32 -0.33
45 AT3G24530 AAA-type ATPase family protein / ankyrin repeat family
protein		 0.72 0.29 -0.3
46 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein 0.72 0.3 -0.31
47 AT4G39220 Rer1 family protein ATRER1A 0.72 0.3 -0.35
48 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.72 0.33 -0.35
49 AT4G02570 cullin 1 cullin 1, AUXIN RESISTANT 6,
cullin 1		 0.72 0.31 -0.31
50 AT4G11900 S-locus lectin protein kinase family protein -0.72 0.32 -0.31
51 AT1G51160 SNARE-like superfamily protein 0.71 0.32 -0.3
52 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.71 0.3 -0.33
53 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.71 0.33 -0.3
54 AT2G20580 26S proteasome regulatory subunit S2 1A 26S PROTEASOME REGULATORY SUBUNIT
S2 1A, 26S proteasome regulatory
subunit S2 1A		 0.71 0.34 -0.3
55 AT5G20880 transposable element gene 0.71 0.31 -0.33
56 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.71 0.32 -0.33
57 AT5G08560 transducin family protein / WD-40 repeat family protein 0.71 0.3 -0.3
58 AT2G23200 Protein kinase superfamily protein -0.71 0.28 -0.3
59 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 0.71 0.31 -0.33
60 AT4G17060 FRIGIDA interacting protein 2 FRIGIDA interacting protein 2 0.7 0.33 -0.3
61 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 0.7 0.32 -0.32
62 AT2G46220 Uncharacterized conserved protein (DUF2358) -0.7 0.32 -0.32
63 AT1G52730 Transducin/WD40 repeat-like superfamily protein 0.7 0.31 -0.31
64 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 -0.7 0.33 -0.32
65 AT5G20700 Protein of unknown function (DUF581) -0.7 0.32 -0.33
66 AT2G37300 unknown protein; Has 93 Blast hits to 62 proteins in 29
species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi -
19; Plants - 25; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).		 ATP-binding cassette I16 -0.7 0.32 -0.31
67 AT3G46540 ENTH/VHS family protein -0.7 0.34 -0.32
68 AT5G49400 zinc knuckle (CCHC-type) family protein 0.7 0.34 -0.31
69 AT3G63460 transducin family protein / WD-40 repeat family protein 0.7 0.31 -0.31
70 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 0.7 0.3 -0.3
71 AT1G73680 alpha dioxygenase alpha dioxygenase -0.7 0.32 -0.33
72 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75		 0.69 0.31 -0.33
73 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 0.69 0.31 -0.31
74 AT2G43790 MAP kinase 6 MAP kinase 6, MAP kinase 6, MAP
kinase 6, MAP kinase 6		 0.69 0.3 -0.31
75 AT5G18110 novel cap-binding protein novel cap-binding protein 0.69 0.32 -0.32
76 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.69 0.29 -0.31
77 AT5G58240 FRAGILE HISTIDINE TRIAD FRAGILE HISTIDINE TRIAD 0.69 0.33 -0.29
78 AT1G22540 Major facilitator superfamily protein -0.69 0.31 -0.29
79 AT3G03050 cellulose synthase-like D3 CELLULOSE SYNTHASE LIKE D3,
cellulose synthase-like D3, KOJAK,
ROOT HAIR DEFECTIVE 7		 0.69 0.32 -0.34
80 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 -0.69 0.34 -0.32
81 AT1G45000 AAA-type ATPase family protein 0.69 0.28 -0.29
82 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 0.68 0.33 -0.3
83 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5		 0.68 0.31 -0.3
84 AT2G03310 unknown protein; Has 17 Blast hits to 17 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.34 -0.32
85 AT3G22810 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.68 0.31 -0.32
86 AT1G49180 protein kinase family protein -0.68 0.32 -0.3
87 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.32 -0.31
88 AT3G07640 unknown protein; Has 27 Blast hits to 27 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.29 -0.34
89 AT1G68740 EXS (ERD1/XPR1/SYG1) family protein PHO1;H1 -0.68 0.3 -0.31
90 AT1G13080 cytochrome P450, family 71, subfamily B, polypeptide 2 cytochrome P450, family 71,
subfamily B, polypeptide 2		 -0.68 0.3 -0.31
91 AT1G69100 Eukaryotic aspartyl protease family protein -0.68 0.32 -0.3
92 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.68 0.32 -0.31
93 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.67 0.32 -0.31
94 AT1G13650 BEST Arabidopsis thaliana protein match is: 18S
pre-ribosomal assembly protein gar2-related
(TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in
255 species: Archae - 22; Bacteria - 222; Metazoa - 684;
Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes -
2392 (source: NCBI BLink).		 -0.67 0.3 -0.31
95 AT1G11480 eukaryotic translation initiation factor-related 0.67 0.32 -0.31
96 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.67 0.31 -0.32
97 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.67 0.3 -0.31
98 AT5G66040 sulfurtransferase protein 16 sulfurtransferase protein 16 -0.67 0.32 -0.32
99 AT5G03230 Protein of unknown function, DUF584 -0.67 0.32 -0.3
100 AT3G56080 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.3 -0.33
101 AT1G08510 fatty acyl-ACP thioesterases B fatty acyl-ACP thioesterases B 0.67 0.32 -0.3
102 AT2G19080 metaxin-related 0.67 0.31 -0.31
103 AT4G02930 GTP binding Elongation factor Tu family protein 0.67 0.31 -0.33
104 AT4G34480 O-Glycosyl hydrolases family 17 protein -0.66 0.3 -0.34
105 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.66 0.33 -0.33
106 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 -0.66 0.33 -0.32
107 AT3G15380 Plasma-membrane choline transporter family protein -0.66 0.3 -0.34
108 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.34 -0.31
109 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 -0.66 0.33 -0.33
110 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.66 0.32 -0.32
111 AT5G54660 HSP20-like chaperones superfamily protein -0.66 0.31 -0.31
112 AT5G63800 Glycosyl hydrolase family 35 protein beta-galactosidase 6,
MUCILAGE-MODIFIED 2		 -0.65 0.32 -0.32
113 AT4G03700 transposable element gene -0.65 0.32 -0.33
114 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 -0.65 0.32 -0.3
115 AT3G01210 RNA-binding (RRM/RBD/RNP motifs) family protein -0.65 0.31 -0.32
116 AT3G60790 F-box family protein -0.65 0.32 -0.3
117 AT2G07510 transposable element gene -0.65 0.32 -0.33
118 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.65 0.31 -0.32
119 AT4G08490 transposable element gene -0.65 0.3 -0.31
120 AT3G27660 oleosin 4 OLEOSIN 3, oleosin 4 -0.65 0.33 -0.33
121 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 -0.65 0.32 -0.34
122 AT4G23870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.33
123 AT1G20620 catalase 3 ATCAT3, catalase 3, SENESCENCE 2 -0.65 0.29 -0.32
124 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 -0.64 0.33 -0.3
125 AT1G67050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits
to 318 proteins in 80 species: Archae - 0; Bacteria - 16;
Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other
Eukaryotes - 268 (source: NCBI BLink).		 -0.64 0.33 -0.31
126 AT3G10100 transposable element gene -0.64 0.33 -0.34
127 AT1G74300 alpha/beta-Hydrolases superfamily protein -0.64 0.32 -0.33
128 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 -0.64 0.33 -0.3
129 AT1G53160 squamosa promoter binding protein-like 4 squamosa promoter binding
protein-like 4		 -0.64 0.31 -0.33
130 AT1G19060 Protein of unknown function (DUF626) -0.64 0.32 -0.33
131 AT3G16060 ATP binding microtubule motor family protein -0.64 0.32 -0.32
132 AT3G04890 Uncharacterized conserved protein (DUF2358) -0.64 0.32 -0.34
133 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.63 0.29 -0.29
134 AT4G16745 Exostosin family protein -0.63 0.31 -0.32
135 AT2G32290 beta-amylase 6 beta-amylase 6, BETA-AMYLASE 5 -0.63 0.31 -0.3
136 AT4G13150 unknown protein; Has 83 Blast hits to 82 proteins in 37
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.31 -0.3
137 AT1G01070 nodulin MtN21 /EamA-like transporter family protein -0.63 0.32 -0.31
138 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.63 0.31 -0.31
139 AT1G12280 LRR and NB-ARC domains-containing disease resistance
protein		 -0.63 0.34 -0.3
140 AT2G05520 glycine-rich protein 3 GLYCINE-RICH PROTEIN 3,
ARABIDOPSIS GLYCINE RICH PROTEIN
3, glycine-rich protein 3,
GLYCINE-RICH PROTEIN 3		 -0.63 0.33 -0.31
141 AT5G41850 alpha/beta-Hydrolases superfamily protein -0.62 0.3 -0.3
142 AT1G02450 NIM1-interacting 1 NIMIN-1, NIM1-interacting 1 -0.62 0.34 -0.3
143 AT2G12300 transposable element gene -0.62 0.3 -0.32
144 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.32 -0.34
145 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.62 0.33 -0.32
146 AT2G10780 transposable element gene -0.62 0.28 -0.31
147 AT2G27375 transposable element gene -0.62 0.3 -0.32
148 AT1G21250 cell wall-associated kinase PRO25, cell wall-associated kinase -0.62 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
149 C0215 PR_MST_2527.1 - - - 0.78 0.45 -0.45
150 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.74 0.45 -0.46 C0136