AT4G02960 : retro element 2
Query Information
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AGICode AT4G02960
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G02960 transposable element gene retro element 2, retro element 2 1 0.34 -0.32
2 AT2G10620 transposable element gene 0.73 0.32 -0.32
3 AT2G16040 hAT dimerisation domain-containing protein /
transposase-related		 0.71 0.33 -0.32
4 AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.34 -0.3
5 AT4G03040 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G33330.1); Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.32 -0.3
6 AT5G29100 transposable element gene -0.68 0.31 -0.3
7 AT2G33030 receptor like protein 25 receptor like protein 25, receptor
like protein 25		 0.68 0.31 -0.33
8 AT1G23540 Protein kinase superfamily protein proline-rich extensin like
receptor kinase, INFLORESCENCE
GROWTH INHIBITOR 1, proline-rich
extensin-like receptor kinase 12		 0.67 0.33 -0.31
9 AT1G50160 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT2G04420.1); Has 34 Blast hits to 34 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.3 -0.3
10 AT2G38520 transposable element gene -0.67 0.33 -0.31
11 AT2G30430 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.31 -0.33
12 AT3G21840 SKP1-like 7 SKP1-like 7, SKP1-like 7 0.66 0.32 -0.31
13 AT1G52840 transposable element gene 0.65 0.32 -0.33
14 AT5G11370 FBD / Leucine Rich Repeat domains containing protein 0.65 0.31 -0.31
15 AT3G30843 transposable element gene 0.65 0.3 -0.32
16 AT5G25430 HCO3- transporter family 0.65 0.3 -0.32
17 AT2G17430 Seven transmembrane MLO family protein ATMLO7, MILDEW RESISTANCE LOCUS O
7, NORTIA		 -0.65 0.34 -0.31
18 AT1G32040 transposable element gene 0.64 0.3 -0.32
19 AT5G49945 Protein of unknown function (DUF1682) 0.64 0.32 -0.31
20 AT1G61430 S-locus lectin protein kinase family protein 0.64 0.33 -0.31
21 AT3G57970 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 0.64 0.32 -0.31
22 AT2G37140 Terpenoid synthases superfamily protein 0.64 0.29 -0.32
23 AT3G10890 Glycosyl hydrolase superfamily protein 0.63 0.31 -0.33
24 AT1G51300 alpha/beta-Hydrolases superfamily protein -0.63 0.32 -0.33
25 AT2G15660 AGAMOUS-like 95 AGAMOUS-like 95 -0.62 0.3 -0.33
26 AT1G29110 Cysteine proteinases superfamily protein 0.62 0.3 -0.31
27 AT4G18920 Protein of unknown function (DUF1264) 0.62 0.31 -0.34
28 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.32 -0.3
29 AT1G72660 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.62 0.31 -0.31
30 AT1G62410 MIF4G domain-containing protein 0.62 0.31 -0.3
31 AT2G34330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29540.1); Has 10 Blast hits
to 10 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.33 -0.33
32 AT2G39240 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.61 0.29 -0.31
33 AT3G22040 Domain of unknown function (DUF26) 0.61 0.32 -0.3
34 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.61 0.31 -0.32
35 AT2G42140 VQ motif-containing protein 0.6 0.3 -0.29
36 AT4G35170 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.6 0.32 -0.33
37 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 0.6 0.3 -0.32
38 AT4G37340 cytochrome P450, family 81, subfamily D, polypeptide 3 cytochrome P450, family 81,
subfamily D, polypeptide 3		 -0.6 0.31 -0.29
39 AT2G10630 transposable element gene 0.6 0.31 -0.3
40 AT1G69190 Dihydropterin pyrophosphokinase / Dihydropteroate synthase -0.6 0.33 -0.32
41 AT1G33580 transposable element gene -0.6 0.31 -0.3
42 AT3G18310 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.31
43 AT4G25010 Nodulin MtN3 family protein AtSWEET14, SWEET14 -0.59 0.35 -0.32
44 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 0.59 0.3 -0.32
45 AT1G56410 heat shock protein 70 (Hsp 70) family protein EARLY-RESPONSIVE TO DEHYDRATION 2,
HEAT SHOCK PROTEIN 70T-1		 -0.59 0.33 -0.31
46 AT2G07430 transposable element gene 0.59 0.31 -0.31
47 AT2G35530 basic region/leucine zipper transcription factor 16 AtbZIP16, basic region/leucine
zipper transcription factor 16		 0.59 0.31 -0.3
48 AT5G57570 GCK domain-containing protein 0.59 0.32 -0.31
49 AT4G36940 nicotinate phosphoribosyltransferase 1 nicotinate
phosphoribosyltransferase 1		 -0.59 0.31 -0.33
50 AT2G34360 MATE efflux family protein -0.59 0.29 -0.3
51 AT4G09360 NB-ARC domain-containing disease resistance protein -0.59 0.29 -0.3
52 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.33 -0.31
53 AT1G09155 phloem protein 2-B15 phloem protein 2-B15, phloem
protein 2-B15		 0.58 0.31 -0.3
54 AT5G27160 transposable element gene 0.58 0.32 -0.31
55 AT1G72870 Disease resistance protein (TIR-NBS class) -0.58 0.33 -0.32
56 AT3G16120 Dynein light chain type 1 family protein 0.58 0.32 -0.33
57 AT2G11120 transposable element gene -0.58 0.31 -0.3
58 AT4G35880 Eukaryotic aspartyl protease family protein 0.58 0.31 -0.32
59 AT3G12203 serine carboxypeptidase-like 17 serine carboxypeptidase-like 17 0.57 0.3 -0.32
60 AT1G54923 transposable element gene 0.57 0.32 -0.32
61 AT4G07586 transposable element gene -0.57 0.3 -0.31
62 AT5G66890 Leucine-rich repeat (LRR) family protein -0.57 0.32 -0.31
63 AT2G31770 RING/U-box superfamily protein ARIADNE 9, ARABIDOPSIS ARIADNE 9 -0.57 0.32 -0.31
64 AT5G19640 Major facilitator superfamily protein 0.56 0.33 -0.3
65 AT1G35500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35614.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.33 -0.34
66 AT2G25630 beta glucosidase 14 beta glucosidase 14 0.56 0.31 -0.32
67 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.3 -0.31
68 AT3G24330 O-Glycosyl hydrolases family 17 protein -0.56 0.33 -0.34
69 AT3G28560 BCS1 AAA-type ATPase 0.56 0.3 -0.31
70 AT4G03810 transposable element gene 0.56 0.29 -0.32
71 AT2G01390 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3111 -0.56 0.31 -0.31
72 AT1G78160 pumilio 7 pumilio 7, pumilio 7 0.55 0.32 -0.31
73 AT1G72000 Plant neutral invertase family protein alkaline/neutral invertase F -0.55 0.33 -0.31
74 AT5G45000 Disease resistance protein (TIR-NBS-LRR class) family 0.55 0.33 -0.31
75 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.55 0.31 -0.32
76 AT1G68560 alpha-xylosidase 1 ALPHA-XYLOSIDASE 1, altered
xyloglucan 3, thermoinhibition
resistant germination 1,
alpha-xylosidase 1		 0.55 0.31 -0.32
77 AT5G02920 F-box/RNI-like superfamily protein -0.55 0.32 -0.3
78 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.31 -0.31
79 AT3G09370 myb domain protein 3r-3 myb domain protein 3R3, myb domain
protein 3r-3		 0.55 0.33 -0.34
80 AT1G37537 transposable element gene -0.55 0.31 -0.3
81 AT3G50170 Plant protein of unknown function (DUF247) 0.55 0.31 -0.32
82 AT3G03080 Zinc-binding dehydrogenase family protein -0.54 0.32 -0.32
83 AT5G51390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.33 -0.32
84 AT1G27590 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana
protein match is: phosphatidylinositol 3- and 4-kinase
family protein (TAIR:AT1G27570.1); Has 109 Blast hits to
109 proteins in 38 species: Archae - 0; Bacteria - 0;
Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.54 0.33 -0.32
85 AT3G19040 histone acetyltransferase of the TAFII250 family 2 histone acetyltransferase of the
TAFII250 family 2, TBP-ASSOCIATED
FACTOR 1, TBP-ASSOCIATED FACTOR 1B		 -0.54 0.29 -0.33
86 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family -0.54 0.33 -0.33
87 AT5G43822 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.32 -0.29
88 AT4G22030 F-box family protein with a domain of unknown function
(DUF295)		 -0.53 0.35 -0.29
89 AT5G64360 Chaperone DnaJ-domain superfamily protein EMF1-Interacting Protein 1 -0.53 0.29 -0.31
90 AT5G35380 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.53 0.31 -0.31
91 AT4G38240 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative		 COMPLEX GLYCAN LESS, COMPLEX
GLYCAN LESS 1,
N-ACETYLGLUCOSAMINYLTRANSFERASE I		 -0.52 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0126 Isorhamnetin-dirhamnoside - - - 0.77 0.46 -0.47
93 C0127 Isorhamnetin-hexosyl-rhamnoside - - - 0.64 0.44 -0.41