AT4G02460 : POSTMEIOTIC SEGREGATION 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G02460
Description DNA mismatch repair protein, putative
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 1 0.32 -0.34
2 AT3G47230 transposable element gene -0.75 0.31 -0.34
3 AT1G70180 Sterile alpha motif (SAM) domain-containing protein 0.75 0.34 -0.32
4 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.69 0.33 -0.31
5 AT3G21100 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.29 -0.31
6 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 0.69 0.31 -0.34
7 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 -0.69 0.32 -0.34
8 AT4G02980 endoplasmic reticulum auxin binding protein 1 ABP, endoplasmic reticulum auxin
binding protein 1		 -0.69 0.31 -0.32
9 AT1G54110 Membrane fusion protein Use1 -0.69 0.31 -0.3
10 AT2G23940 Protein of unknown function (DUF788) -0.68 0.33 -0.33
11 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.35 -0.33
12 AT4G09100 RING/U-box superfamily protein 0.68 0.34 -0.31
13 AT4G05050 ubiquitin 11 ubiquitin 11 -0.68 0.32 -0.31
14 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 0.67 0.33 -0.31
15 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.67 0.32 -0.29
16 AT1G14200 RING/U-box superfamily protein -0.67 0.32 -0.33
17 AT3G47460 Structural maintenance of chromosomes (SMC) family protein ATSMC2 0.67 0.29 -0.31
18 AT1G30010 Intron maturase, type II family protein 0.66 0.32 -0.35
19 AT1G62820 Calcium-binding EF-hand family protein -0.66 0.33 -0.33
20 AT3G21410 F-box and associated interaction domains-containing protein 0.66 0.32 -0.3
21 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 -0.66 0.32 -0.34
22 AT4G00440 Protein of unknown function (DUF3741) -0.66 0.33 -0.31
23 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1		 0.65 0.3 -0.32
24 AT5G49470 PAS domain-containing protein tyrosine kinase family
protein		 0.65 0.33 -0.31
25 AT2G45700 sterile alpha motif (SAM) domain-containing protein 0.65 0.33 -0.31
26 AT3G53370 S1FA-like DNA-binding protein -0.65 0.31 -0.31
27 AT5G58150 Leucine-rich repeat protein kinase family protein 0.65 0.31 -0.31
28 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.65 0.33 -0.32
29 AT5G01730 SCAR family protein 4 ATSCAR4, SCAR family protein 4,
WAVE3		 0.64 0.3 -0.3
30 AT4G36750 Quinone reductase family protein -0.64 0.31 -0.33
31 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 0.64 0.32 -0.31
32 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 -0.63 0.31 -0.33
33 AT2G21470 SUMO-activating enzyme 2 SUMO-ACTIVATING ENZYME 2, EMBRYO
DEFECTIVE 2764, SUMO-activating
enzyme 2		 0.63 0.32 -0.32
34 AT1G11280 S-locus lectin protein kinase family protein 0.63 0.32 -0.3
35 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.63 0.32 -0.32
36 AT3G10890 Glycosyl hydrolase superfamily protein -0.63 0.31 -0.31
37 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.63 0.31 -0.3
38 AT5G36090 transposable element gene -0.63 0.31 -0.3
39 AT1G59710 Protein of unknown function (DUF569) -0.63 0.3 -0.29
40 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.63 0.3 -0.29
41 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.63 0.32 -0.32
42 AT3G31920 transposable element gene 0.63 0.31 -0.31
43 AT4G02450 HSP20-like chaperones superfamily protein -0.62 0.3 -0.31
44 AT2G13750 transposable element gene 0.62 0.33 -0.34
45 AT3G48480 Cysteine proteinases superfamily protein 0.62 0.34 -0.33
46 AT3G13410 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.62 0.31 -0.32
47 AT1G15950 cinnamoyl coa reductase 1 ATCCR1, cinnamoyl coa reductase 1,
IRREGULAR XYLEM 4		 -0.62 0.34 -0.34
48 AT5G20500 Glutaredoxin family protein -0.62 0.31 -0.31
49 AT2G40630 Uncharacterised conserved protein (UCP030365) 0.61 0.29 -0.31
50 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.61 0.31 -0.32
51 AT5G27220 Frigida-like protein 0.61 0.34 -0.32
52 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.61 0.31 -0.3
53 AT3G10240 F-box and associated interaction domains-containing protein 0.61 0.31 -0.32
54 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 0.61 0.3 -0.32
55 AT3G08890 Protein of unknown function, DUF538 -0.61 0.32 -0.3
56 AT3G43130 transposable element gene 0.61 0.33 -0.3
57 AT1G35820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30520.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.61 0.31 -0.33
58 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 -0.6 0.33 -0.31
59 AT2G04710 transposable element gene 0.6 0.31 -0.3
60 AT5G08500 Transmembrane CLPTM1 family protein 0.6 0.31 -0.32
61 AT1G47420 succinate dehydrogenase 5 succinate dehydrogenase 5 -0.6 0.32 -0.32
62 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 0.6 0.31 -0.31
63 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 -0.59 0.31 -0.3
64 AT3G49400 Transducin/WD40 repeat-like superfamily protein 0.59 0.34 -0.32
65 AT3G30800 transposable element gene 0.59 0.3 -0.31
66 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.59 0.31 -0.3
67 AT1G15280 CASC3/Barentsz eIF4AIII binding 0.59 0.3 -0.32
68 AT5G19600 sulfate transporter 3;5 sulfate transporter 3;5 0.59 0.3 -0.31
69 AT4G01500 AP2/B3-like transcriptional factor family protein NGATHA4 0.59 0.32 -0.33
70 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 0.59 0.33 -0.3
71 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 0.59 0.31 -0.31
72 AT3G09880 Protein phosphatase 2A regulatory B subunit family protein ATB' BETA 0.59 0.33 -0.3
73 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.59 0.31 -0.31
74 AT5G28050 Cytidine/deoxycytidylate deaminase family protein -0.59 0.31 -0.31
75 AT5G02280 SNARE-like superfamily protein -0.59 0.33 -0.32
76 AT4G07580 transposable element gene -0.59 0.32 -0.31
77 AT3G01910 sulfite oxidase AT-SO, AtSO, sulfite oxidase -0.58 0.33 -0.32
78 AT4G02540 Cysteine/Histidine-rich C1 domain family protein -0.58 0.32 -0.31
79 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.58 0.31 -0.31
80 AT2G40250 SGNH hydrolase-type esterase superfamily protein -0.58 0.31 -0.29
81 AT3G29640 transposable element gene -0.58 0.3 -0.31
82 AT5G39950 thioredoxin 2 Arabidopsis thioredoxin h2,
thioredoxin 2, ATTRXH2,
thioredoxin 2, THIOREDOXIN H2		 -0.57 0.3 -0.32
83 AT4G09960 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 11, SEEDSTICK -0.57 0.29 -0.32
84 AT4G28770 Tetraspanin family protein -0.56 0.32 -0.3
85 AT4G01650 Polyketide cyclase / dehydrase and lipid transport protein -0.56 0.3 -0.34
86 AT2G13335 transposable element gene -0.56 0.33 -0.3
87 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 -0.56 0.3 -0.31
88 AT1G44060 transposable element gene -0.56 0.31 -0.32
89 AT4G03810 transposable element gene -0.56 0.33 -0.31
90 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein -0.56 0.31 -0.34
91 AT5G13720 Uncharacterised protein family (UPF0114) -0.56 0.3 -0.31
92 AT5G38470 Rad23 UV excision repair protein family RADIATION SENSITIVE23D -0.56 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - 0.62 0.31 -0.29