AGICode | AT4G02510 |
Description | translocon at the outer envelope membrane of chloroplasts 159 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G02510 | translocon at the outer envelope membrane of chloroplasts 159 |
ATTOC159, PLASTID PROTEIN IMPORT 2, translocon at the outer envelope membrane of chloroplasts 159, TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 160, TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 86 |
1 | 0.33 | -0.31 | ||
2 | AT3G57430 | Tetratricopeptide repeat (TPR)-like superfamily protein | ORGANELLE TRANSCRIPT PROCESSING 84 | 0.9 | 0.33 | -0.32 | ||
3 | AT5G08610 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
PIGMENT DEFECTIVE 340 | 0.87 | 0.32 | -0.33 | ||
4 | AT4G25990 | CCT motif family protein | CIL | 0.87 | 0.32 | -0.3 | ||
5 | AT5G42480 | Chaperone DnaJ-domain superfamily protein | ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 |
0.86 | 0.32 | -0.33 | ||
6 | AT3G06980 | DEA(D/H)-box RNA helicase family protein | 0.86 | 0.33 | -0.29 | |||
7 | AT4G39960 | Molecular chaperone Hsp40/DnaJ family protein | 0.84 | 0.32 | -0.31 | |||
8 | AT1G09900 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.84 | 0.31 | -0.29 | |||
9 | AT3G46740 | translocon at the outer envelope membrane of chloroplasts 75-III |
MODIFIER OF ARG1 1, translocon at the outer envelope membrane of chloroplasts 75-III |
0.83 | 0.32 | -0.34 | ||
10 | AT5G18570 | GTP1/OBG family protein | ATOBGC, OBG-like protein, chloroplastic SAR1, EMBRYO DEFECTIVE 269, EMBRYO DEFECTIVE 3138 |
0.83 | 0.32 | -0.32 | ||
11 | AT5G63420 | RNA-metabolising metallo-beta-lactamase family protein | embryo defective 2746 | 0.82 | 0.32 | -0.32 | ||
12 | AT1G79090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.82 | 0.34 | -0.34 | |||
13 | AT2G18940 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.82 | 0.33 | -0.33 | |||
14 | AT5G63420 | RNA-metabolising metallo-beta-lactamase family protein | embryo defective 2746 | 0.82 | 0.33 | -0.33 | ||
15 | AT5G07900 | Mitochondrial transcription termination factor family protein |
0.82 | 0.33 | -0.31 | |||
16 | AT1G62390 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein |
CLUMPED CHLOROPLASTS 1, Phox2 | 0.82 | 0.32 | -0.32 | ||
17 | AT3G16260 | tRNAse Z4 | tRNAse Z4 | 0.81 | 0.3 | -0.31 | ||
18 | AT1G18090 | 5'-3' exonuclease family protein | 0.81 | 0.29 | -0.33 | |||
19 | AT4G30720 | FAD/NAD(P)-binding oxidoreductase family protein | PIGMENT DEFECTIVE 327 | 0.81 | 0.3 | -0.31 | ||
20 | AT2G29760 | Tetratricopeptide repeat (TPR)-like superfamily protein | ORGANELLE TRANSCRIPT PROCESSING 81 | 0.81 | 0.34 | -0.33 | ||
21 | AT4G02680 | ETO1-like 1 | ETO1-like 1 | 0.8 | 0.33 | -0.31 | ||
22 | AT3G23570 | alpha/beta-Hydrolases superfamily protein | -0.8 | 0.3 | -0.32 | |||
23 | AT4G32420 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.8 | 0.32 | -0.3 | |||
24 | AT1G69950 | transposable element gene | 0.8 | 0.32 | -0.31 | |||
25 | AT1G77370 | Glutaredoxin family protein | -0.79 | 0.3 | -0.33 | |||
26 | AT1G15510 | Tetratricopeptide repeat (TPR)-like superfamily protein | ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2, EARLY CHLOROPLAST BIOGENESIS2, VANILLA CREAM 1 |
0.78 | 0.3 | -0.33 | ||
27 | AT5G53620 | unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 28929 Blast hits to 19542 proteins in 1425 species: Archae - 211; Bacteria - 3079; Metazoa - 14558; Fungi - 2157; Plants - 966; Viruses - 80; Other Eukaryotes - 7878 (source: NCBI BLink). |
0.78 | 0.32 | -0.33 | |||
28 | AT1G48650 | DEA(D/H)-box RNA helicase family protein | 0.78 | 0.32 | -0.31 | |||
29 | AT1G09830 | Glycinamide ribonucleotide (GAR) synthetase | 0.78 | 0.31 | -0.32 | |||
30 | AT4G38050 | Xanthine/uracil permease family protein | 0.78 | 0.31 | -0.34 | |||
31 | AT1G79560 | FTSH protease 12 | EMBRYO DEFECTIVE 1047, EMBRYO DEFECTIVE 156, EMBRYO DEFECTIVE 36, FTSH protease 12 |
0.78 | 0.31 | -0.31 | ||
32 | AT1G26540 | Agenet domain-containing protein | 0.78 | 0.33 | -0.32 | |||
33 | AT3G10260 | Reticulon family protein | -0.77 | 0.3 | -0.31 | |||
34 | AT2G04030 | Chaperone protein htpG family protein | HEAT SHOCK PROTEIN 90.5, CR88, EMBRYO DEFECTIVE 1956, HEAT SHOCK PROTEIN 88.1, HEAT SHOCK PROTEIN 90.5 |
0.77 | 0.32 | -0.3 | ||
35 | AT3G16470 | Mannose-binding lectin superfamily protein | jacalin-related lectin 35, JASMONATE RESPONSIVE 1 |
-0.77 | 0.31 | -0.33 | ||
36 | AT2G24120 | DNA/RNA polymerases superfamily protein | PIGMENT DEFECTIVE 319, SCABRA 3 | 0.77 | 0.31 | -0.32 | ||
37 | AT5G64370 | beta-ureidopropionase | beta-ureidopropionase, PYRIMIDINE 3 |
-0.77 | 0.32 | -0.34 | ||
38 | AT1G73500 | MAP kinase kinase 9 | ATMKK9, MAP kinase kinase 9 | -0.77 | 0.31 | -0.33 | ||
39 | AT5G20130 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.77 | 0.34 | -0.33 | |||
40 | AT5G56860 | GATA type zinc finger transcription factor family protein | GATA TRANSCRIPTION FACTOR 21, GATA, nitrate-inducible, carbon metabolism-involved |
0.77 | 0.29 | -0.33 | ||
41 | AT2G34060 | Peroxidase superfamily protein | 0.77 | 0.31 | -0.32 | |||
42 | AT1G24440 | RING/U-box superfamily protein | -0.77 | 0.32 | -0.31 | |||
43 | AT3G14900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 17135 Blast hits to 10204 proteins in 644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536; Fungi - 2506; Plants - 1043; Viruses - 361; Other Eukaryotes - 5958 (source: NCBI BLink). |
EMBRYO DEFECTIVE 3120 | 0.77 | 0.31 | -0.31 | ||
44 | AT1G63680 | acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases |
ALBINO OR PALE-GREEN 13, ATMURE, MURE, PIGMENT DEFECTIVE EMBRYO 316 |
0.76 | 0.33 | -0.32 | ||
45 | AT3G11660 | NDR1/HIN1-like 1 | NDR1/HIN1-like 1 | -0.76 | 0.32 | -0.3 | ||
46 | AT1G52410 | TSK-associating protein 1 | TSK-associating protein 1 | -0.76 | 0.36 | -0.31 | ||
47 | AT1G79080 | Pentatricopeptide repeat (PPR) superfamily protein | 0.76 | 0.33 | -0.3 | |||
48 | AT3G61780 | embryo defective 1703 | embryo defective 1703 | 0.76 | 0.28 | -0.31 | ||
49 | AT1G74800 | Galactosyltransferase family protein | 0.76 | 0.32 | -0.3 | |||
50 | AT5G39980 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.76 | 0.31 | -0.31 | |||
51 | AT5G12200 | pyrimidine 2 | pyrimidine 2 | -0.75 | 0.31 | -0.31 | ||
52 | AT5G47240 | nudix hydrolase homolog 8 | nudix hydrolase homolog 8, nudix hydrolase homolog 8 |
-0.75 | 0.31 | -0.32 | ||
53 | AT2G14750 | APS kinase | APS KINASE 1, APS kinase, ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 1, ATAKN1 |
-0.75 | 0.32 | -0.31 | ||
54 | AT2G39420 | alpha/beta-Hydrolases superfamily protein | -0.75 | 0.3 | -0.3 | |||
55 | AT4G29210 | gamma-glutamyl transpeptidase 4 | gamma-glutamyl transpeptidase 3, gamma-glutamyl transpeptidase 4 |
-0.75 | 0.33 | -0.32 | ||
56 | AT1G51940 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein |
0.75 | 0.31 | -0.31 | |||
57 | AT3G48500 | Nucleic acid-binding, OB-fold-like protein | PIGMENT DEFECTIVE 312, PLASTID TRANSCRIPTIONALLY ACTIVE 10 |
0.75 | 0.31 | -0.31 | ||
58 | AT5G03490 | UDP-Glycosyltransferase superfamily protein | -0.75 | 0.29 | -0.32 | |||
59 | AT1G55920 | serine acetyltransferase 2;1 | serine acetyltransferase 2;1, SERINE ACETYLTRANSFERASE 1, SERINE ACETYLTRANSFERASE 5, serine acetyltransferase 2;1 |
-0.75 | 0.3 | -0.32 | ||
60 | AT5G15760 | Ribosomal protein PSRP-3/Ycf65 | 0.75 | 0.32 | -0.32 | |||
61 | AT3G17970 | translocon at the outer membrane of chloroplasts 64-III | translocon at the outer membrane of chloroplasts 64-III, translocon at the outer membrane of chloroplasts 64-III |
0.75 | 0.29 | -0.33 | ||
62 | AT3G04550 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.74 | 0.32 | -0.3 | |||
63 | AT2G25280 | CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). |
-0.74 | 0.31 | -0.31 | |||
64 | AT3G25500 | formin homology 1 | formin homology 1, AHF1, ARABIDOPSIS THALIANA FORMIN HOMOLOGY 1, FORMIN HOMOLOGY 1 |
0.74 | 0.3 | -0.31 | ||
65 | AT1G45150 | unknown protein; Has 219 Blast hits to 202 proteins in 78 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
-0.74 | 0.34 | -0.31 | |||
66 | AT1G13640 | Phosphatidylinositol 3- and 4-kinase family protein | 0.74 | 0.29 | -0.33 | |||
67 | AT4G30700 | Pentatricopeptide repeat (PPR) superfamily protein | 0.74 | 0.31 | -0.33 | |||
68 | AT1G31430 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.74 | 0.3 | -0.33 | |||
69 | AT3G14730 | Pentatricopeptide repeat (PPR) superfamily protein | 0.74 | 0.32 | -0.32 | |||
70 | AT2G16400 | BEL1-like homeodomain 7 | BEL1-like homeodomain 7 | 0.74 | 0.3 | -0.31 | ||
71 | AT4G39530 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.74 | 0.32 | -0.29 | |||
72 | AT1G08610 | Pentatricopeptide repeat (PPR) superfamily protein | 0.74 | 0.34 | -0.31 | |||
73 | AT5G10300 | methyl esterase 5 | AtHNL, ARABIDOPSIS THALIANA METHYL ESTERASE 5, HYDROXYNITRILE LYASE, methyl esterase 5 |
-0.74 | 0.34 | -0.31 | ||
74 | AT4G01070 | UDP-Glycosyltransferase superfamily protein | GT72B1, UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1 |
-0.73 | 0.31 | -0.31 | ||
75 | AT1G12810 | proline-rich family protein | -0.73 | 0.32 | -0.32 | |||
76 | AT5G41800 | Transmembrane amino acid transporter family protein | -0.73 | 0.33 | -0.32 | |||
77 | AT4G30530 | Class I glutamine amidotransferase-like superfamily protein | gamma-glutamyl peptidase 1 | -0.73 | 0.31 | -0.31 | ||
78 | AT3G51130 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
-0.73 | 0.32 | -0.35 | |||
79 | AT1G14120 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.72 | 0.3 | -0.32 | |||
80 | AT3G11100 | sequence-specific DNA binding transcription factors | -0.72 | 0.29 | -0.32 | |||
81 | AT2G39330 | jacalin-related lectin 23 | jacalin-related lectin 23 | -0.72 | 0.32 | -0.32 | ||
82 | AT4G33780 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.3 | -0.32 | |||
83 | AT1G62660 | Glycosyl hydrolases family 32 protein | -0.72 | 0.3 | -0.32 | |||
84 | AT1G64200 | vacuolar H+-ATPase subunit E isoform 3 | vacuolar H+-ATPase subunit E isoform 3 |
-0.72 | 0.31 | -0.31 | ||
85 | AT3G05290 | peroxisomal adenine nucleotide carrier 1 | AtPNC1, peroxisomal adenine nucleotide carrier 1 |
-0.72 | 0.33 | -0.3 | ||
86 | AT3G26460 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.72 | 0.3 | -0.34 | |||
87 | AT4G30810 | serine carboxypeptidase-like 29 | serine carboxypeptidase-like 29 | -0.71 | 0.3 | -0.34 | ||
88 | AT1G75280 | NmrA-like negative transcriptional regulator family protein | -0.71 | 0.3 | -0.32 | |||
89 | AT1G17080 | Ribosomal protein L18ae family | -0.71 | 0.33 | -0.32 | |||
90 | AT1G52140 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.3 | -0.32 | |||
91 | AT1G67560 | PLAT/LH2 domain-containing lipoxygenase family protein | Arabidopsis thaliana lipoxygenase 6, lipoxygenase 6 |
-0.71 | 0.35 | -0.29 | ||
92 | AT4G30550 | Class I glutamine amidotransferase-like superfamily protein | gamma-glutamyl peptidase 3 | -0.71 | 0.32 | -0.3 | ||
93 | AT3G59760 | O-acetylserine (thiol) lyase isoform C | ARABIDOPSIS THALIANA CYSTEINSYNTHASE-C, O-acetylserine (thiol) lyase isoform C |
-0.71 | 0.31 | -0.33 | ||
94 | AT3G17365 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.71 | 0.33 | -0.32 | |||
95 | AT3G54840 | Ras-related small GTP-binding family protein | ARA-6, ARA6, ATRAB5C, ATRABF1, RABF1 |
-0.71 | 0.32 | -0.3 | ||
96 | AT5G45130 | RAB homolog 1 | ARABIDOPSIS RAB HOMOLOG F2A, ATRAB5A, ATRABF2A, RAB HOMOLOG F2A, RAB5A, RABF2A, RAB homolog 1 |
-0.71 | 0.34 | -0.33 | ||
97 | AT5G52120 | phloem protein 2-A14 | phloem protein 2-A14, phloem protein 2-A14 |
-0.7 | 0.31 | -0.32 | ||
98 | AT4G01897 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). |
-0.7 | 0.33 | -0.32 | |||
99 | AT5G24420 | 6-phosphogluconolactonase 5 | 6-phosphogluconolactonase 5 | -0.7 | 0.32 | -0.3 | ||
100 | AT3G17940 | Galactose mutarotase-like superfamily protein | -0.7 | 0.3 | -0.29 | |||
101 | AT2G06050 | oxophytodienoate-reductase 3 | AtOPR3, DELAYED DEHISCENCE 1, oxophytodienoate-reductase 3 |
-0.7 | 0.31 | -0.31 | ||
102 | AT2G43530 | Scorpion toxin-like knottin superfamily protein | -0.69 | 0.32 | -0.35 | |||
103 | AT2G38760 | annexin 3 | ANNEXIN 3, annexin 3 | -0.69 | 0.33 | -0.32 | ||
104 | AT2G27310 | F-box family protein | -0.69 | 0.31 | -0.32 | |||
105 | AT4G28085 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.3 | -0.31 | |||
106 | AT2G24200 | Cytosol aminopeptidase family protein | -0.69 | 0.33 | -0.3 | |||
107 | AT1G06800 | alpha/beta-Hydrolases superfamily protein | phospholipase A I gamma 1 | -0.69 | 0.3 | -0.33 | ||
108 | AT1G75270 | dehydroascorbate reductase 2 | dehydroascorbate reductase 2 | -0.69 | 0.34 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
109 | C0120 | Isocitric acid | - | Isocitrate | TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), glutamine biosynthesis III, glyoxylate cycle |
-0.83 | 0.44 | -0.44 | ||
110 | C0134 | Kaempferol-7-O-neohesperidoside | - | - | - | 0.8 | 0.46 | -0.45 |