AT4G02230 : -
Query Information
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AGICode AT4G02230
Description Ribosomal protein L19e family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G02230 Ribosomal protein L19e family protein 1 0.31 -0.33
2 AT2G44120 Ribosomal protein L30/L7 family protein 0.85 0.32 -0.33
3 AT5G57290 60S acidic ribosomal protein family 0.84 0.29 -0.33
4 AT3G01790 Ribosomal protein L13 family protein 0.84 0.33 -0.31
5 AT1G15250 Zinc-binding ribosomal protein family protein 0.82 0.3 -0.3
6 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.82 0.32 -0.33
7 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.82 0.33 -0.32
8 AT5G24840 tRNA (guanine-N-7) methyltransferase 0.81 0.31 -0.33
9 AT5G35530 Ribosomal protein S3 family protein 0.81 0.32 -0.34
10 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.8 0.31 -0.32
11 AT5G06360 Ribosomal protein S8e family protein 0.8 0.3 -0.3
12 AT4G13940 S-adenosyl-L-homocysteine hydrolase S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE
1, EMBRYO DEFECTIVE 1395,
HOMOLOGY-DEPENDENT GENE SILENCING
1, MATERNAL EFFECT EMBRYO ARREST
58, S-ADENOSYL-L-HOMOCYSTEIN
HYDROLASE 1		 0.79 0.3 -0.3
13 AT5G23900 Ribosomal protein L13e family protein 0.79 0.3 -0.32
14 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.79 0.32 -0.31
15 AT3G62940 Cysteine proteinases superfamily protein 0.79 0.29 -0.33
16 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.79 0.3 -0.32
17 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein 0.78 0.31 -0.32
18 AT4G31985 Ribosomal protein L39 family protein 0.78 0.3 -0.34
19 AT5G02450 Ribosomal protein L36e family protein 0.78 0.3 -0.32
20 AT3G04920 Ribosomal protein S24e family protein 0.77 0.3 -0.31
21 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.77 0.3 -0.33
22 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.77 0.34 -0.31
23 AT2G36160 Ribosomal protein S11 family protein 0.77 0.32 -0.29
24 AT2G46230 PIN domain-like family protein 0.77 0.32 -0.33
25 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.77 0.31 -0.3
26 AT1G25260 Ribosomal protein L10 family protein 0.77 0.33 -0.29
27 AT2G32220 Ribosomal L27e protein family 0.77 0.31 -0.31
28 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.77 0.33 -0.32
29 AT3G06790 plastid developmental protein DAG, putative 0.76 0.31 -0.31
30 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.75 0.31 -0.34
31 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.75 0.31 -0.34
32 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.75 0.32 -0.34
33 AT3G49910 Translation protein SH3-like family protein 0.75 0.34 -0.31
34 AT5G13850 nascent polypeptide-associated complex subunit alpha-like
protein 3		 nascent polypeptide-associated
complex subunit alpha-like protein
3		 0.75 0.34 -0.3
35 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.32 -0.32
36 AT5G27700 Ribosomal protein S21e 0.75 0.33 -0.3
37 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.75 0.31 -0.32
38 AT2G44790 uclacyanin 2 uclacyanin 2 0.75 0.32 -0.34
39 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 0.75 0.3 -0.29
40 AT3G15640 Rubredoxin-like superfamily protein 0.74 0.34 -0.32
41 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.74 0.32 -0.33
42 AT5G02050 Mitochondrial glycoprotein family protein 0.74 0.33 -0.31
43 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.74 0.31 -0.33
44 AT3G63090 Ubiquitin carboxyl-terminal hydrolase family protein 0.74 0.3 -0.32
45 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 0.74 0.31 -0.33
46 AT1G51340 MATE efflux family protein -0.74 0.3 -0.35
47 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.31 -0.31
48 AT5G05990 Mitochondrial glycoprotein family protein 0.74 0.36 -0.3
49 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.73 0.33 -0.33
50 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.32
51 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.73 0.31 -0.3
52 AT4G26720 protein phosphatase X 1 PROTEIN PHOSPHATASE X-1, protein
phosphatase X 1		 0.73 0.33 -0.32
53 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.73 0.3 -0.3
54 AT1G56710 Pectin lyase-like superfamily protein -0.71 0.3 -0.31
55 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.71 0.32 -0.31
56 AT1G08190 vacuolar protein sorting 41 ATVAM2, VACUOLAR PROTEIN SORTING
41, VAM2, vacuolar protein sorting
41, ZIGZAG SUPPRESSOR 2		 -0.71 0.33 -0.3
57 AT5G62130 Per1-like family protein -0.7 0.32 -0.31
58 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.7 0.32 -0.3
59 AT5G43150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.34 -0.34
60 AT1G19835 Plant protein of unknown function (DUF869) -0.68 0.34 -0.32
61 AT4G02630 Protein kinase superfamily protein -0.68 0.32 -0.32
62 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.66 0.31 -0.3
63 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 -0.66 0.32 -0.3
64 AT3G56050 Protein kinase family protein -0.65 0.31 -0.31
65 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.65 0.31 -0.3
66 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.65 0.31 -0.34
67 AT4G13260 Flavin-binding monooxygenase family protein YUCCA2 -0.65 0.33 -0.33
68 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.65 0.32 -0.32
69 AT3G26730 RING/U-box superfamily protein -0.64 0.33 -0.3
70 AT5G13880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.31 -0.3
71 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.64 0.31 -0.31
72 AT5G58670 phospholipase C1 ARABIDOPSIS THALIANA PHOSPHOLIPASE
C, phospholipase C1, phospholipase
C 1, phospholipase C1		 -0.64 0.31 -0.33
73 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.31 -0.31
74 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.63 0.3 -0.3
75 AT4G01210 glycosyl transferase family 1 protein -0.63 0.33 -0.34
76 AT4G27435 Protein of unknown function (DUF1218) -0.63 0.31 -0.32
77 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.63 0.31 -0.31
78 AT1G19700 BEL1-like homeodomain 10 BEL1-like homeodomain 10,
BEL1-LIKE HOMEODOMAIN 10		 -0.63 0.31 -0.31
79 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.63 0.29 -0.29
80 AT3G03790 ankyrin repeat family protein / regulator of chromosome
condensation (RCC1) family protein		 -0.62 0.32 -0.34
81 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.62 0.34 -0.32
82 AT3G50220 Protein of unknown function (DUF579) IRREGULAR XYLEM 15 -0.62 0.31 -0.34
83 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.62 0.33 -0.3
84 AT2G15530 RING/U-box superfamily protein -0.62 0.32 -0.32
85 AT3G12350 F-box family protein -0.62 0.34 -0.33
86 AT1G60270 beta glucosidase 6 beta glucosidase 6 -0.62 0.29 -0.32
87 AT2G29970 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.61 0.34 -0.29
88 AT3G45680 Major facilitator superfamily protein -0.61 0.29 -0.3
89 AT5G14510 ARM repeat superfamily protein -0.61 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
90 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.69 0.32 -0.31 C0260
91 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.66 0.32 -0.3 C0142
92 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.63 0.3 -0.31 C0092
93 C0216 Proline L-Proline L-Proline proline degradation II,
arginine degradation VI (arginase 2 pathway),
L-Ndelta-acetylornithine biosynthesis,
tRNA charging,
citrulline biosynthesis,
proline biosynthesis III 		-0.61 0.3 -0.31 C0216