AGICode | AT4G01810 |
Description | Sec23/Sec24 protein transport family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G01810 | Sec23/Sec24 protein transport family protein | 1 | 0.33 | -0.3 | |||
2 | AT5G61790 | calnexin 1 | ATCNX1, calnexin 1 | 0.83 | 0.31 | -0.31 | ||
3 | AT3G24200 | FAD/NAD(P)-binding oxidoreductase family protein | 0.83 | 0.3 | -0.32 | |||
4 | AT5G06120 | ARM repeat superfamily protein | 0.83 | 0.35 | -0.29 | |||
5 | AT3G10370 | FAD-dependent oxidoreductase family protein | SUGAR-DEPENDENT 6 | 0.81 | 0.34 | -0.31 | ||
6 | AT1G42540 | glutamate receptor 3.3 | ATGLR3.3, glutamate receptor 3.3 | 0.8 | 0.32 | -0.34 | ||
7 | AT2G15760 | Protein of unknown function (DUF1645) | 0.8 | 0.31 | -0.34 | |||
8 | AT3G62600 | DNAJ heat shock family protein | ATERDJ3B, ERDJ3B | 0.8 | 0.33 | -0.32 | ||
9 | AT1G74230 | glycine-rich RNA-binding protein 5 | glycine-rich RNA-binding protein 5 | 0.79 | 0.33 | -0.31 | ||
10 | AT4G39080 | vacuolar proton ATPase A3 | vacuolar proton ATPase A3 | 0.78 | 0.31 | -0.32 | ||
11 | AT4G11380 | Adaptin family protein | 0.78 | 0.31 | -0.31 | |||
12 | AT5G06600 | ubiquitin-specific protease 12 | AtUBP12, ubiquitin-specific protease 12 |
0.78 | 0.31 | -0.33 | ||
13 | AT1G21750 | PDI-like 1-1 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 5, PDI-like 1-1, PROTEIN DISULFIDE ISOMERASE 5, PDI-like 1-1 |
0.78 | 0.31 | -0.31 | ||
14 | AT2G39020 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.77 | 0.31 | -0.3 | |||
15 | AT3G44940 | Protein of unknown function (DUF1635) | -0.76 | 0.32 | -0.31 | |||
16 | AT3G16270 | ENTH/VHS family protein | 0.76 | 0.33 | -0.31 | |||
17 | AT4G29520 | LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). |
0.76 | 0.34 | -0.3 | |||
18 | AT3G47930 | L-galactono-1,4-lactone dehydrogenase | L-galactono-1,4-lactone dehydrogenase, L-galactono-1,4-lactone dehydrogenase |
0.75 | 0.32 | -0.32 | ||
19 | AT4G23460 | Adaptin family protein | 0.75 | 0.32 | -0.33 | |||
20 | AT4G39980 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 |
0.75 | 0.32 | -0.3 | ||
21 | AT1G49500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.74 | 0.29 | -0.29 | |||
22 | AT4G23880 | unknown protein; Has 73 Blast hits to 69 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2; Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). |
-0.74 | 0.34 | -0.32 | |||
23 | AT4G16660 | heat shock protein 70 (Hsp 70) family protein | 0.73 | 0.33 | -0.33 | |||
24 | AT5G19000 | BTB-POZ and MATH domain 1 | BTB-POZ AND MATH DOMAIN 1, BTB-POZ and MATH domain 1 |
0.73 | 0.33 | -0.31 | ||
25 | AT4G04630 | Protein of unknown function, DUF584 | -0.73 | 0.31 | -0.32 | |||
26 | AT4G08170 | Inositol 1,3,4-trisphosphate 5/6-kinase family protein | 0.72 | 0.31 | -0.3 | |||
27 | AT2G22860 | phytosulfokine 2 precursor | phytosulfokine 2 precursor, phytosulfokine 2 precursor |
0.72 | 0.29 | -0.3 | ||
28 | AT4G28950 | RHO-related protein from plants 9 | Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, RHO-related protein from plants 9 |
-0.72 | 0.3 | -0.32 | ||
29 | AT5G13030 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). |
0.72 | 0.3 | -0.32 | |||
30 | AT2G17040 | NAC domain containing protein 36 | NAC domain containing protein 36, NAC domain containing protein 36 |
-0.71 | 0.31 | -0.31 | ||
31 | AT4G13730 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.71 | 0.31 | -0.29 | |||
32 | AT3G26280 | cytochrome P450, family 71, subfamily B, polypeptide 4 | cytochrome P450, family 71, subfamily B, polypeptide 4 |
-0.71 | 0.31 | -0.35 | ||
33 | AT5G25240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.71 | 0.34 | -0.32 | |||
34 | AT2G01190 | Octicosapeptide/Phox/Bem1p family protein | PIGMENT DEFECTIVE 331 | 0.71 | 0.31 | -0.33 | ||
35 | AT2G29320 | NAD(P)-binding Rossmann-fold superfamily protein | -0.71 | 0.31 | -0.31 | |||
36 | AT4G24190 | Chaperone protein htpG family protein | HEAT SHOCK PROTEIN 90-7, HEAT SHOCK PROTEIN 90.7, HEAT SHOCK PROTEIN 90.7, SHEPHERD |
0.71 | 0.32 | -0.33 | ||
37 | AT1G73177 | bonsai | anaphase-promoting complex 13, BONSAI |
0.7 | 0.31 | -0.31 | ||
38 | AT2G04450 | nudix hydrolase homolog 6 | nudix hydrolase homolog 6, Arabidopsis thaliana nucleoside diphosphate linked to some moiety X 6, nudix hydrolase homolog 6, nucleoside diphosphates linked to some moiety X 6 |
-0.7 | 0.31 | -0.32 | ||
39 | AT1G61840 | Cysteine/Histidine-rich C1 domain family protein | -0.7 | 0.32 | -0.33 | |||
40 | AT2G03120 | signal peptide peptidase | signal peptide peptidase, signal peptide peptidase |
0.7 | 0.32 | -0.3 | ||
41 | AT1G20980 | squamosa promoter binding protein-like 14 | SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14, FBR6, squamosa promoter binding protein-like 14, SPL1R2 |
0.7 | 0.32 | -0.3 | ||
42 | AT3G51460 | Phosphoinositide phosphatase family protein | ROOT HAIR DEFECTIVE4 | 0.7 | 0.3 | -0.3 | ||
43 | AT2G14120 | dynamin related protein | dynamin related protein | 0.7 | 0.33 | -0.33 | ||
44 | AT1G18500 | methylthioalkylmalate synthase-like 4 | ISOPROPYLMALATE SYNTHASE 1, methylthioalkylmalate synthase-like 4 |
0.7 | 0.31 | -0.32 | ||
45 | AT1G78800 | UDP-Glycosyltransferase superfamily protein | 0.69 | 0.32 | -0.33 | |||
46 | AT1G54490 | exoribonuclease 4 | ACC INSENSITIVE 1, EXORIBONUCLEASE 4, ETHYLENE INSENSITIVE 5, exoribonuclease 4 |
0.69 | 0.32 | -0.32 | ||
47 | AT1G69960 | serine/threonine protein phosphatase 2A | serine/threonine protein phosphatase 2A |
0.69 | 0.33 | -0.33 | ||
48 | AT4G24330 | Protein of unknown function (DUF1682) | 0.69 | 0.31 | -0.33 | |||
49 | AT1G80040 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.68 | 0.31 | -0.32 | |||
50 | AT4G35890 | winged-helix DNA-binding transcription factor family protein |
0.68 | 0.32 | -0.29 | |||
51 | AT1G08030 | tyrosylprotein sulfotransferase | active quiescent center1, tyrosylprotein sulfotransferase |
0.68 | 0.34 | -0.31 | ||
52 | AT1G08090 | nitrate transporter 2:1 | ACH1, NITRATE TRANSPORTER 2.1, nitrate transporter 2:1, LATERAL ROOT INITIATION 1, NITRATE TRANSPORTER 2, NITRATE TRANSPORTER 2.1, nitrate transporter 2:1, NRT2;1AT |
-0.68 | 0.31 | -0.31 | ||
53 | AT4G38500 | Protein of unknown function (DUF616) | 0.68 | 0.3 | -0.33 | |||
54 | AT1G31460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). |
-0.67 | 0.31 | -0.32 | |||
55 | AT5G08480 | VQ motif-containing protein | -0.67 | 0.31 | -0.33 | |||
56 | AT5G56620 | NAC domain containing protein 99 | NAC domain containing protein 99, NAC domain containing protein 99 |
-0.67 | 0.33 | -0.31 | ||
57 | AT2G31290 | Ubiquitin carboxyl-terminal hydrolase family protein | -0.67 | 0.31 | -0.32 | |||
58 | AT1G47210 | cyclin-dependent protein kinase 3;2 | cyclin-dependent protein kinase 3;2 |
-0.66 | 0.3 | -0.31 | ||
59 | AT4G30110 | heavy metal atpase 2 | ARABIDOPSIS HEAVY METAL ATPASE 2, heavy metal atpase 2 |
-0.66 | 0.33 | -0.31 | ||
60 | AT5G60840 | unknown protein; Has 361 Blast hits to 333 proteins in 92 species: Archae - 2; Bacteria - 55; Metazoa - 145; Fungi - 36; Plants - 42; Viruses - 19; Other Eukaryotes - 62 (source: NCBI BLink). |
-0.66 | 0.33 | -0.33 | |||
61 | AT3G06520 | agenet domain-containing protein | -0.66 | 0.31 | -0.3 | |||
62 | AT4G25490 | C-repeat/DRE binding factor 1 | ATCBF1, C-repeat/DRE binding factor 1, DRE BINDING PROTEIN 1B |
-0.65 | 0.29 | -0.31 | ||
63 | AT3G13062 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.65 | 0.32 | -0.31 | |||
64 | AT1G27440 | Exostosin family protein | ATGUT1, GUT2, IRX10 | -0.64 | 0.31 | -0.32 | ||
65 | AT1G06110 | SKP1/ASK-interacting protein 16 | SKP1/ASK-interacting protein 16 | -0.63 | 0.33 | -0.32 | ||
66 | AT1G13470 | Protein of unknown function (DUF1262) | -0.63 | 0.32 | -0.32 | |||
67 | AT2G07180 | Protein kinase superfamily protein | -0.63 | 0.31 | -0.32 | |||
68 | AT5G26010 | Protein phosphatase 2C family protein | -0.62 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
69 | C0117 | Hydroxyproline | (2S,4R)-Hydroxyproline | 4-Hydroxy-L-proline | protein precursor | 0.74 | 0.45 | -0.47 |