AGICode | AT4G01150 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G01150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
1 | 0.29 | -0.29 | |||
2 | AT5G59250 | Major facilitator superfamily protein | 0.92 | 0.31 | -0.3 | |||
3 | AT5G01530 | light harvesting complex photosystem II | light harvesting complex photosystem II |
0.9 | 0.3 | -0.33 | ||
4 | AT3G18890 | NAD(P)-binding Rossmann-fold superfamily protein | translocon at the inner envelope membrane of chloroplasts 62, translocon at the inner envelope membrane of chloroplasts 62 |
0.89 | 0.31 | -0.3 | ||
5 | AT1G12800 | Nucleic acid-binding, OB-fold-like protein | 0.89 | 0.33 | -0.3 | |||
6 | AT4G37930 | serine transhydroxymethyltransferase 1 | serine transhydroxymethyltransferase 1, SERINE HYDROXYMETHYLTRANSFERASE 1, SERINE TRANSHYDROXYMETHYLTRANSFERASE |
0.89 | 0.33 | -0.3 | ||
7 | AT2G01590 | chlororespiratory reduction 3 | CHLORORESPIRATORY REDUCTION 3 | 0.89 | 0.31 | -0.33 | ||
8 | AT3G60750 | Transketolase | 0.88 | 0.32 | -0.3 | |||
9 | AT4G30950 | fatty acid desaturase 6 | fatty acid desaturase 6, FATTY ACID DESATURASE C, STEAROYL DESATURASE DEFICIENCY 4 |
0.88 | 0.28 | -0.33 | ||
10 | AT5G35630 | glutamine synthetase 2 | GLUTAMINE SYNTHETASE LIKE 1, GLUTAMINE SYNTHETASE 2, glutamine synthetase 2 |
0.88 | 0.31 | -0.32 | ||
11 | AT3G56940 | dicarboxylate diiron protein, putative (Crd1) | ACSF, CHL27, COPPER RESPONSE DEFECT 1 |
0.88 | 0.31 | -0.31 | ||
12 | AT4G12800 | photosystem I subunit l | photosystem I subunit l | 0.88 | 0.32 | -0.31 | ||
13 | AT1G67740 | photosystem II BY | photosystem II BY, YCF32 | 0.88 | 0.35 | -0.33 | ||
14 | AT1G32080 | membrane protein, putative | AtLrgB, LrgB | 0.87 | 0.31 | -0.33 | ||
15 | AT1G79040 | photosystem II subunit R | photosystem II subunit R | 0.87 | 0.32 | -0.31 | ||
16 | AT3G17040 | high chlorophyll fluorescent 107 | high chlorophyll fluorescent 107 | 0.87 | 0.33 | -0.32 | ||
17 | AT2G47590 | photolyase/blue-light receptor 2 | photolyase/blue-light receptor 2 | 0.87 | 0.3 | -0.29 | ||
18 | AT1G55670 | photosystem I subunit G | photosystem I subunit G | 0.87 | 0.32 | -0.3 | ||
19 | AT5G17230 | PHYTOENE SYNTHASE | PHYTOENE SYNTHASE | 0.87 | 0.31 | -0.31 | ||
20 | AT2G05620 | proton gradient regulation 5 | proton gradient regulation 5 | 0.86 | 0.32 | -0.32 | ||
21 | AT3G52750 | Tubulin/FtsZ family protein | FTSZ2-2 | 0.86 | 0.31 | -0.34 | ||
22 | AT1G44575 | Chlorophyll A-B binding family protein | CP22, NONPHOTOCHEMICAL QUENCHING 4, PHOTOSYSTEM II SUBUNIT S |
0.86 | 0.32 | -0.32 | ||
23 | AT3G63140 | chloroplast stem-loop binding protein of 41 kDa | chloroplast stem-loop binding protein of 41 kDa |
0.86 | 0.32 | -0.33 | ||
24 | AT1G18060 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.85 | 0.3 | -0.33 | |||
25 | AT2G27680 | NAD(P)-linked oxidoreductase superfamily protein | 0.85 | 0.31 | -0.31 | |||
26 | AT4G10340 | light harvesting complex of photosystem II 5 | light harvesting complex of photosystem II 5 |
0.85 | 0.32 | -0.34 | ||
27 | AT3G16140 | photosystem I subunit H-1 | photosystem I subunit H-1 | 0.85 | 0.31 | -0.32 | ||
28 | AT1G80030 | Molecular chaperone Hsp40/DnaJ family protein | 0.85 | 0.32 | -0.32 | |||
29 | AT3G54890 | photosystem I light harvesting complex gene 1 | photosystem I light harvesting complex gene 1 |
0.84 | 0.34 | -0.32 | ||
30 | AT1G74880 | NAD(P)H:plastoquinone dehydrogenase complex subunit O | NAD(P)H:plastoquinone dehydrogenase complex subunit O, NADH dehydrogenase-like complex ) |
0.84 | 0.32 | -0.3 | ||
31 | AT4G10300 | RmlC-like cupins superfamily protein | 0.84 | 0.33 | -0.29 | |||
32 | AT5G42765 | INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.83 | 0.32 | -0.32 | |||
33 | AT5G23120 | photosystem II stability/assembly factor, chloroplast (HCF136) |
HIGH CHLOROPHYLL FLUORESCENCE 136 | 0.83 | 0.31 | -0.32 | ||
34 | AT4G35250 | NAD(P)-binding Rossmann-fold superfamily protein | 0.83 | 0.34 | -0.31 | |||
35 | AT2G15820 | endonucleases | ORGANELLE TRANSCRIPT PROCESSING 51 | 0.83 | 0.3 | -0.32 | ||
36 | AT4G21750 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
MERISTEM LAYER 1 | 0.83 | 0.31 | -0.33 | ||
37 | AT5G08650 | Small GTP-binding protein | 0.83 | 0.31 | -0.3 | |||
38 | AT5G61410 | D-ribulose-5-phosphate-3-epimerase | EMBRYO DEFECTIVE 2728, D-ribulose-5-phosphate-3-epimerase |
0.83 | 0.34 | -0.32 | ||
39 | AT5G54290 | cytochrome c biogenesis protein family | CcdA | 0.82 | 0.31 | -0.31 | ||
40 | AT5G09660 | peroxisomal NAD-malate dehydrogenase 2 | peroxisomal NAD-malate dehydrogenase 2 |
0.82 | 0.34 | -0.29 | ||
41 | AT1G16080 | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
0.82 | 0.31 | -0.3 | |||
42 | AT2G04039 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). |
0.82 | 0.33 | -0.31 | |||
43 | AT2G35370 | glycine decarboxylase complex H | glycine decarboxylase complex H | 0.82 | 0.33 | -0.3 | ||
44 | AT3G22150 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.82 | 0.32 | -0.32 | |||
45 | AT5G44190 | GOLDEN2-like 2 | ATGLK2, GOLDEN2-like 2, GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 |
0.82 | 0.31 | -0.32 | ||
46 | AT3G16290 | AAA-type ATPase family protein | embryo defective 2083 | 0.82 | 0.31 | -0.3 | ||
47 | AT1G76790 | O-methyltransferase family protein | indole glucosinolate O-methyltransferase 5 |
-0.76 | 0.31 | -0.33 | ||
48 | AT5G03240 | polyubiquitin 3 | polyubiquitin 3 | -0.71 | 0.3 | -0.32 | ||
49 | AT1G35140 | Phosphate-responsive 1 family protein | EXORDIUM like 1, PHOSPHATE-INDUCED 1 |
-0.71 | 0.33 | -0.31 | ||
50 | AT3G50260 | cooperatively regulated by ethylene and jasmonate 1 | ATERF#011, cooperatively regulated by ethylene and jasmonate 1, DREB AND EAR MOTIF PROTEIN 1 |
-0.71 | 0.31 | -0.31 | ||
51 | AT5G38030 | MATE efflux family protein | -0.7 | 0.31 | -0.3 | |||
52 | AT3G26440 | Protein of unknown function (DUF707) | -0.7 | 0.3 | -0.31 | |||
53 | AT4G37940 | AGAMOUS-like 21 | AGAMOUS-like 21 | -0.69 | 0.33 | -0.3 | ||
54 | AT3G21770 | Peroxidase superfamily protein | -0.67 | 0.31 | -0.31 | |||
55 | AT4G37410 | cytochrome P450, family 81, subfamily F, polypeptide 4 | cytochrome P450, family 81, subfamily F, polypeptide 4 |
-0.66 | 0.3 | -0.33 | ||
56 | AT1G07870 | Protein kinase superfamily protein | -0.66 | 0.32 | -0.3 | |||
57 | AT1G69600 | zinc finger homeodomain 1 | ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 29, zinc finger homeodomain 1, ZINC FINGER HOMEODOMAIN 11 |
-0.66 | 0.31 | -0.29 | ||
58 | AT5G14180 | Myzus persicae-induced lipase 1 | Myzus persicae-induced lipase 1 | -0.66 | 0.34 | -0.32 | ||
59 | AT4G37870 | phosphoenolpyruvate carboxykinase 1 | phosphoenolpyruvate carboxykinase 1, PHOSPHOENOLPYRUVATE CARBOXYKINASE |
-0.66 | 0.32 | -0.31 | ||
60 | AT2G35930 | plant U-box 23 | plant U-box 23 | -0.65 | 0.32 | -0.33 | ||
61 | AT2G16595 | Translocon-associated protein (TRAP), alpha subunit | -0.64 | 0.32 | -0.3 |