AT4G01030 : -
Query Information
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AGICode AT4G01030
Description pentatricopeptide (PPR) repeat-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G01030 pentatricopeptide (PPR) repeat-containing protein 1 0.31 -0.31
2 AT4G04330 Chaperonin-like RbcX protein AtRbcX1, homologue of
cyanobacterial RbcX 1		 0.8 0.31 -0.32
3 AT2G30350 Excinuclease ABC, C subunit, N-terminal 0.78 0.31 -0.32
4 AT3G58710 WRKY DNA-binding protein 69 RABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 69, WRKY
DNA-binding protein 69		 -0.76 0.32 -0.3
5 AT3G13320 cation exchanger 2 atcax2, cation exchanger 2 -0.76 0.32 -0.32
6 AT1G13100 cytochrome P450, family 71, subfamily B, polypeptide 29 cytochrome P450, family 71,
subfamily B, polypeptide 29		 0.76 0.34 -0.33
7 AT4G27520 early nodulin-like protein 2 AtENODL2, early nodulin-like
protein 2		 0.76 0.33 -0.34
8 AT5G60300 Concanavalin A-like lectin protein kinase family protein lectin receptor kinase I.9 -0.75 0.32 -0.32
9 AT4G36860 LIM domain-containing protein DA1-RELATED PROTEIN 1 -0.75 0.3 -0.32
10 AT1G51940 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein		 0.75 0.31 -0.31
11 AT1G74390 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.75 0.3 -0.33
12 AT3G25870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits
to 50 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.3 -0.33
13 AT1G75270 dehydroascorbate reductase 2 dehydroascorbate reductase 2 -0.75 0.34 -0.3
14 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.31 -0.32
15 AT1G01250 Integrase-type DNA-binding superfamily protein 0.74 0.34 -0.29
16 AT1G67510 Leucine-rich repeat protein kinase family protein 0.74 0.3 -0.32
17 AT4G14605 Mitochondrial transcription termination factor family
protein		 0.73 0.32 -0.3
18 AT5G04360 limit dextrinase limit dextrinase, PULLULANASE 1,
limit dextrinase, PULLULANASE 1		 0.73 0.3 -0.31
19 AT5G10830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.72 0.33 -0.31
20 AT4G08940 Ubiquitin carboxyl-terminal hydrolase family protein 0.72 0.32 -0.34
21 AT4G15340 pentacyclic triterpene synthase 1 04C11, pentacyclic triterpene
synthase 1, pentacyclic triterpene
synthase 1		 -0.72 0.33 -0.31
22 AT1G16370 organic cation/carnitine transporter 6 ARABIDOPSIS THALIANA ORGANIC
CATION/CARNITINE TRANSPORTER 6,
organic cation/carnitine
transporter 6		 -0.72 0.31 -0.34
23 AT2G33860 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE TRANSCRIPTION
FACTOR 3, ETTIN		 0.71 0.31 -0.29
24 AT1G62200 Major facilitator superfamily protein AtPTR6, peptide transporter 6 -0.71 0.31 -0.3
25 AT4G37470 alpha/beta-Hydrolases superfamily protein 0.71 0.32 -0.32
26 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.71 0.29 -0.32
27 AT2G18850 SET domain-containing protein 0.7 0.32 -0.32
28 AT1G55850 cellulose synthase like E1 ATCSLE1, cellulose synthase like
E1		 -0.7 0.31 -0.29
29 AT5G26600 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.69 0.29 -0.32
30 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 -0.69 0.3 -0.31
31 AT3G60490 Integrase-type DNA-binding superfamily protein -0.69 0.34 -0.32
32 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 -0.69 0.32 -0.32
33 AT3G56950 small and basic intrinsic protein 2;1 SMALL AND BASIC INTRINSIC PROTEIN
2, small and basic intrinsic
protein 2;1		 -0.69 0.3 -0.29
34 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 -0.69 0.31 -0.32
35 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.69 0.33 -0.32
36 AT1G23850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits
to 40 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.31
37 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 -0.68 0.32 -0.31
38 AT4G17180 O-Glycosyl hydrolases family 17 protein 0.68 0.33 -0.33
39 ATCG00490 ribulose-bisphosphate carboxylases RBCL 0.68 0.29 -0.31
40 AT2G16980 Major facilitator superfamily protein -0.68 0.32 -0.31
41 AT2G39920 HAD superfamily, subfamily IIIB acid phosphatase 0.68 0.31 -0.32
42 AT2G45350 Pentatricopeptide repeat (PPR) superfamily protein CHLORORESPIRATORY REDUCTION 4 0.67 0.3 -0.29
43 AT1G13930 Involved in response to salt stress. Knockout mutants are
hypersensitive to salt stress.		 0.67 0.31 -0.31
44 AT3G46170 NAD(P)-binding Rossmann-fold superfamily protein -0.67 0.31 -0.32
45 AT2G41540 6-phosphogluconate dehydrogenase family protein GPDHC1 0.67 0.31 -0.34
46 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C		 -0.67 0.31 -0.3
47 AT1G54410 dehydrin family protein 0.67 0.3 -0.3
48 AT1G06460 alpha-crystallin domain 32.1 ALPHA-CRYSTALLIN DOMAIN 31.2,
alpha-crystallin domain 32.1		 0.67 0.31 -0.3
49 AT1G14120 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.32 -0.31
50 AT4G21850 methionine sulfoxide reductase B9 methionine sulfoxide reductase B9,
methionine sulfoxide reductase B9		 -0.66 0.32 -0.31
51 AT4G13640 Homeodomain-like superfamily protein unfertilized embryo sac 16 0.66 0.3 -0.33
52 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 0.66 0.33 -0.31
53 AT1G04000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits
to 62 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.33 -0.31
54 AT4G27780 acyl-CoA binding protein 2 acyl-CoA binding protein 2 -0.66 0.32 -0.32
55 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 -0.66 0.32 -0.34
56 AT5G23840 MD-2-related lipid recognition domain-containing protein -0.66 0.33 -0.33
57 AT3G58690 Protein kinase superfamily protein 0.66 0.35 -0.32
58 AT1G22380 UDP-glucosyl transferase 85A3 UDP-glucosyl transferase 85A3,
UDP-glucosyl transferase 85A3		 -0.65 0.32 -0.32
59 AT4G00730 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ARABIDOPSIS THALIANA HOMEODOMAIN
PROTEIN, ANTHOCYANINLESS 2		 0.65 0.29 -0.3
60 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.65 0.32 -0.31
61 AT5G41860 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.65 0.3 -0.31
62 AT2G33500 B-box type zinc finger protein with CCT domain 0.65 0.32 -0.31
63 AT2G45920 U-box domain-containing protein -0.65 0.32 -0.3
64 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 0.65 0.34 -0.3
65 AT4G34650 squalene synthase 2 squalene synthase 2 0.65 0.33 -0.32
66 AT2G46450 cyclic nucleotide-gated channel 12 cyclic nucleotide-gated channel
12, cyclic nucleotide-gated
channel 12		 -0.65 0.33 -0.34
67 AT5G09320 Vacuolar sorting protein 9 (VPS9) domain VPS9B 0.65 0.31 -0.33
68 AT1G72175 RING/U-box protein with domain of unknown function (DUF
1232)		 -0.65 0.32 -0.3
69 AT2G28650 exocyst subunit exo70 family protein H8 exocyst subunit exo70 family
protein H8, exocyst subunit exo70
family protein H8		 -0.65 0.33 -0.31
70 AT5G11150 vesicle-associated membrane protein 713 vesicle-associated membrane
protein 713, VAMP713,
vesicle-associated membrane
protein 713		 0.65 0.31 -0.32
71 AT4G37850 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.31 -0.31
72 AT2G01300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits
to 73 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.29
73 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE -0.64 0.32 -0.32
74 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.64 0.29 -0.33
75 AT3G59660 C2 domain-containing protein / GRAM domain-containing
protein		 -0.64 0.31 -0.34
76 AT3G19550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 9 growth stages; Has 36 Blast hits to 36 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.64 0.33 -0.31
77 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.32 -0.32
78 AT2G42760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881); Has 170
Blast hits to 164 proteins in 34 species: Archae - 0;
Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107;
Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).		 -0.63 0.32 -0.32
79 AT5G05540 small RNA degrading nuclease 2 small RNA degrading nuclease 2 -0.63 0.32 -0.31
80 AT5G01010 CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has
172 Blast hits to 172 proteins in 43 species: Archae - 0;
Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 63; Viruses
- 0; Other Eukaryotes - 14 (source: NCBI BLink).		 -0.63 0.31 -0.3
81 AT3G26670 Protein of unknown function (DUF803) -0.63 0.31 -0.32
82 AT5G04330 Cytochrome P450 superfamily protein -0.63 0.33 -0.3
83 AT4G26310 elongation factor P (EF-P) family protein -0.63 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
84 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.78 0.44 -0.47