AT4G01280 : -
Query Information
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AGICode AT4G01280
Description Homeodomain-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G01280 Homeodomain-like superfamily protein 1 0.33 -0.32
2 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 -0.78 0.3 -0.32
3 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.76 0.33 -0.31
4 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.74 0.31 -0.32
5 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.31 -0.32
6 AT1G80720 Mitochondrial glycoprotein family protein -0.74 0.3 -0.31
7 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 -0.72 0.32 -0.33
8 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 -0.72 0.31 -0.32
9 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.3 -0.32
10 AT2G20940 Protein of unknown function (DUF1279) -0.72 0.32 -0.32
11 AT3G15000 cobalt ion binding -0.72 0.33 -0.32
12 AT3G07000 Cysteine/Histidine-rich C1 domain family protein -0.72 0.3 -0.33
13 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 -0.72 0.3 -0.31
14 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 0.72 0.31 -0.31
15 AT3G61890 homeobox 12 homeobox 12, ARABIDOPSIS THALIANA
HOMEOBOX 12, homeobox 12		 0.71 0.31 -0.33
16 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 -0.71 0.32 -0.32
17 AT3G19630 Radical SAM superfamily protein -0.71 0.33 -0.29
18 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 -0.71 0.31 -0.31
19 AT3G54920 Pectin lyase-like superfamily protein powdery mildew resistant 6 -0.7 0.33 -0.35
20 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 0.7 0.33 -0.31
21 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.31 -0.33
22 AT2G39795 Mitochondrial glycoprotein family protein -0.7 0.33 -0.33
23 AT3G57550 guanylate kinase guanylate kinase, GUANYLATE KINAS
2		 -0.7 0.32 -0.32
24 AT1G26750 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.31 -0.32
25 AT1G08040 Protein of unknown function (DUF707) 0.7 0.33 -0.3
26 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 0.7 0.31 -0.32
27 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.31
28 AT1G30580 GTP binding -0.69 0.32 -0.32
29 AT3G28200 Peroxidase superfamily protein -0.69 0.29 -0.33
30 AT2G44860 Ribosomal protein L24e family protein -0.69 0.3 -0.32
31 AT1G07500 unknown protein; Has 4 Blast hits to 4 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.31 -0.32
32 AT1G01910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.31 -0.31
33 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.33 -0.33
34 AT2G43770 Transducin/WD40 repeat-like superfamily protein -0.68 0.3 -0.32
35 AT3G13040 myb-like HTH transcriptional regulator family protein 0.68 0.34 -0.33
36 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein -0.68 0.31 -0.3
37 AT2G30050 transducin family protein / WD-40 repeat family protein -0.68 0.32 -0.31
38 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic -0.68 0.31 -0.32
39 AT2G01970 Endomembrane protein 70 protein family -0.68 0.31 -0.3
40 AT5G16930 AAA-type ATPase family protein -0.68 0.31 -0.32
41 AT3G55605 Mitochondrial glycoprotein family protein -0.68 0.33 -0.3
42 AT1G12270 stress-inducible protein, putative Hop1 -0.68 0.33 -0.31
43 AT1G76160 SKU5 similar 5 SKU5 similar 5 -0.67 0.32 -0.32
44 AT2G35790 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1301 (InterPro:IPR009724); Has 116
Blast hits to 116 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses
- 0; Other Eukaryotes - 8 (source: NCBI BLink).		 -0.67 0.32 -0.3
45 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 -0.67 0.32 -0.34
46 AT2G34357 ARM repeat superfamily protein -0.67 0.32 -0.31
47 AT4G26210 Mitochondrial ATP synthase subunit G protein -0.67 0.29 -0.3
48 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 -0.67 0.31 -0.33
49 AT5G42420 Nucleotide-sugar transporter family protein -0.67 0.32 -0.32
50 AT1G10290 dynamin-like protein 6 dynamin-like protein 6,
DYNAMIN-RELATED PROTEIN 2A		 -0.67 0.32 -0.34
51 AT5G67220 FMN-linked oxidoreductases superfamily protein -0.67 0.31 -0.3
52 AT2G37020 Translin family protein -0.67 0.31 -0.3
53 AT5G10840 Endomembrane protein 70 protein family -0.67 0.29 -0.3
54 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.3 -0.34
55 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 -0.66 0.3 -0.33
56 AT3G10090 Nucleic acid-binding, OB-fold-like protein -0.66 0.31 -0.32
57 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 0.66 0.33 -0.3
58 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 0.66 0.32 -0.31
59 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.66 0.3 -0.31
60 AT4G23540 ARM repeat superfamily protein -0.66 0.33 -0.34
61 AT2G25590 Plant Tudor-like protein 0.65 0.3 -0.33
62 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.32 -0.31
63 AT1G71400 receptor like protein 12 receptor like protein 12, receptor
like protein 12		 -0.65 0.31 -0.33
64 AT1G10550 xyloglucan:xyloglucosyl transferase 33 XYLOGLUCAN:XYLOGLUCOSYL
TRANSFERASE 33,
xyloglucan:xyloglucosyl
transferase 33		 -0.65 0.32 -0.3
65 AT4G08460 Protein of unknown function (DUF1644) -0.65 0.31 -0.3
66 AT5G24570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.33 -0.32
67 AT4G12270 Copper amine oxidase family protein -0.65 0.31 -0.33
68 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 -0.65 0.3 -0.31
69 AT5G64650 Ribosomal protein L17 family protein -0.65 0.3 -0.3
70 AT4G28450 nucleotide binding;protein binding -0.65 0.32 -0.34
71 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.31 -0.35
72 AT2G20585 nuclear fusion defective 6 NUCLEAR FUSION DEFECTIVE 6 -0.65 0.32 -0.3
73 AT3G22300 ribosomal protein S10 ribosomal protein S10 -0.65 0.33 -0.31
74 AT4G15660 Thioredoxin superfamily protein -0.65 0.3 -0.3
75 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 -0.65 0.34 -0.31
76 AT3G16480 mitochondrial processing peptidase alpha subunit mitochondrial processing peptidase
alpha subunit		 -0.65 0.3 -0.32
77 AT4G34000 abscisic acid responsive elements-binding factor 3 abscisic acid responsive
elements-binding factor 3, AtABF3,
DC3 PROMOTER-BINDING FACTOR 5		 0.65 0.32 -0.32
78 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.3 -0.3
79 AT5G23300 pyrimidine d pyrimidine d -0.65 0.32 -0.31
80 AT4G02930 GTP binding Elongation factor Tu family protein -0.65 0.31 -0.31
81 AT1G24600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits
to 18 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.29 -0.31
82 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 -0.64 0.32 -0.35
83 AT3G61240 DEA(D/H)-box RNA helicase family protein -0.64 0.33 -0.31
84 AT3G17230 invertase/pectin methylesterase inhibitor family protein 0.64 0.31 -0.34
85 AT3G25545 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 38
Blast hits to 38 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.29 -0.33
86 AT1G07615 GTP-binding protein Obg/CgtA -0.64 0.31 -0.31
87 AT5G66410 phosducin-like protein 3 homolog phosducin-like protein 3 homolog -0.64 0.31 -0.31
88 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.64 0.31 -0.32
89 AT5G10930 CBL-interacting protein kinase 5 CBL-interacting protein kinase 5,
SNF1-RELATED PROTEIN KINASE 3.24		 0.64 0.33 -0.33
90 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.31 -0.33
91 AT5G19680 Leucine-rich repeat (LRR) family protein -0.64 0.33 -0.3
92 AT3G12770 mitochondrial editing factor 22 mitochondrial editing factor 22 -0.64 0.31 -0.29
93 AT1G53645 hydroxyproline-rich glycoprotein family protein -0.64 0.32 -0.32
94 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 -0.64 0.31 -0.31
95 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 -0.63 0.3 -0.31
96 AT1G64910 UDP-Glycosyltransferase superfamily protein -0.63 0.3 -0.31
97 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 0.63 0.3 -0.3
98 AT4G29390 Ribosomal protein S30 family protein -0.63 0.34 -0.33
99 AT4G36020 cold shock domain protein 1 cold shock domain protein 1 -0.63 0.32 -0.34
100 AT4G22840 Sodium Bile acid symporter family 0.63 0.3 -0.31
101 AT1G16730 unknown protein 6 unknown protein 6 0.63 0.32 -0.32
102 AT5G05920 deoxyhypusine synthase deoxyhypusine synthase, embryo sac
development arrest 22		 -0.63 0.33 -0.32
103 AT4G39220 Rer1 family protein ATRER1A -0.63 0.32 -0.32
104 AT1G14670 Endomembrane protein 70 protein family -0.63 0.3 -0.3
105 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.63 0.33 -0.3
106 AT3G27390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast
hits to 99 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.3
107 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 -0.63 0.31 -0.31
108 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 -0.63 0.32 -0.31
109 AT3G56690 Cam interacting protein 111 Cam interacting protein 111 -0.63 0.31 -0.31
110 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 0.63 0.33 -0.29
111 AT4G16510 YbaK/aminoacyl-tRNA synthetase-associated domain -0.63 0.31 -0.31
112 AT1G23200 Plant invertase/pectin methylesterase inhibitor superfamily 0.62 0.34 -0.3
113 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.62 0.3 -0.32
114 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 0.62 0.31 -0.31
115 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.62 0.3 -0.32
116 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 0.61 0.32 -0.31
117 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 0.61 0.32 -0.35
118 AT1G03070 Bax inhibitor-1 family protein 0.61 0.32 -0.32
119 AT5G24120 sigma factor E SIGMA FACTOR 5, SIGMA FACTOR 5,
sigma factor E		 0.61 0.32 -0.3
120 AT3G08870 Concanavalin A-like lectin protein kinase family protein 0.61 0.32 -0.32
121 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.31 -0.29
122 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.6 0.3 -0.31
123 AT4G21940 calcium-dependent protein kinase 15 calcium-dependent protein kinase
15		 0.6 0.3 -0.31
124 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 0.6 0.3 -0.32
125 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 0.6 0.31 -0.29
126 AT1G08250 arogenate dehydratase 6 arogenate dehydratase 6,
Arabidopsis thaliana arogenate
dehydratase 6		 0.6 0.33 -0.32
127 AT1G56710 Pectin lyase-like superfamily protein 0.59 0.3 -0.31
128 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 0.59 0.3 -0.32
129 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.59 0.33 -0.33
130 AT1G48840 Plant protein of unknown function (DUF639) 0.59 0.32 -0.31
131 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 0.59 0.31 -0.32
132 AT5G52880 F-box family protein 0.59 0.32 -0.33
133 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.59 0.32 -0.33
134 AT4G04080 ISCU-like 3 ISCU-LIKE 3, ISCU-like 3 0.58 0.3 -0.31
135 AT3G28890 receptor like protein 43 receptor like protein 43, receptor
like protein 43		 0.58 0.35 -0.32
136 AT1G01520 Homeodomain-like superfamily protein ALTERED SEED GERMINATION 4 0.58 0.31 -0.3
137 AT2G25690 Protein of unknown function (DUF581) 0.57 0.29 -0.31
138 AT3G49340 Cysteine proteinases superfamily protein 0.57 0.3 -0.32
139 AT1G41900 transposable element gene 0.57 0.32 -0.31
140 AT5G46830 NACL-inducible gene 1 NACL-INDUCIBLE GENE 1,
NACL-inducible gene 1		 0.57 0.31 -0.32
141 AT5G66670 Protein of unknown function (DUF677) 0.57 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
142 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II 0.58 0.32 -0.32 C0097