AT4G00710 : BR-signaling kinase 3
Query Information
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AGICode AT4G00710
Description BR-signaling kinase 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 1 0.33 -0.3
2 AT2G32800 protein kinase family protein AP4.3A -0.85 0.33 -0.32
3 AT4G12390 pectin methylesterase inhibitor 1 pectin methylesterase inhibitor 1 0.84 0.31 -0.32
4 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.84 0.3 -0.29
5 AT4G11460 cysteine-rich RLK (RECEPTOR-like protein kinase) 30 cysteine-rich RLK (RECEPTOR-like
protein kinase) 30		 0.83 0.34 -0.28
6 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.82 0.29 -0.34
7 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.82 0.3 -0.31
8 AT5G65650 Protein of unknown function (DUF1195) 0.82 0.31 -0.33
9 AT1G09780 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 1		 0.82 0.33 -0.31
10 AT2G40460 Major facilitator superfamily protein -0.82 0.31 -0.31
11 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 0.81 0.33 -0.32
12 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.8 0.31 -0.32
13 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 -0.8 0.3 -0.31
14 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.8 0.31 -0.33
15 AT1G61660 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.8 0.31 -0.32
16 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.8 0.33 -0.31
17 AT3G07270 GTP cyclohydrolase I 0.79 0.32 -0.31
18 AT3G02350 galacturonosyltransferase 9 galacturonosyltransferase 9 0.79 0.33 -0.33
19 AT1G52050 Mannose-binding lectin superfamily protein 0.79 0.3 -0.34
20 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 0.78 0.31 -0.32
21 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.78 0.33 -0.33
22 AT3G20300 Protein of unknown function (DUF3537) -0.78 0.31 -0.32
23 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.78 0.31 -0.33
24 AT4G21870 HSP20-like chaperones superfamily protein 0.78 0.29 -0.29
25 AT2G24170 Endomembrane protein 70 protein family 0.78 0.33 -0.31
26 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.77 0.34 -0.29
27 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.77 0.31 -0.3
28 AT1G34020 Nucleotide-sugar transporter family protein 0.77 0.32 -0.33
29 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.77 0.33 -0.34
30 AT3G14440 nine-cis-epoxycarotenoid dioxygenase 3 ATNCED3, nine-cis-epoxycarotenoid
dioxygenase 3, SUGAR INSENSITIVE
7, SALT TOLERANT 1		 -0.77 0.31 -0.31
31 AT1G66440 Cysteine/Histidine-rich C1 domain family protein 0.77 0.31 -0.32
32 AT2G27330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.77 0.33 -0.33
33 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.77 0.33 -0.32
34 AT1G14210 Ribonuclease T2 family protein 0.77 0.33 -0.31
35 AT4G27730 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 6, oligopeptide
transporter 1		 0.76 0.32 -0.31
36 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.76 0.31 -0.33
37 AT1G11680 CYTOCHROME P450 51G1 CYTOCHROME P450 51, CYTOCHROME
P450 51A2, CYTOCHROME P450 51G1,
embryo defective 1738		 0.76 0.31 -0.36
38 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.76 0.32 -0.32
39 AT5G04370 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 NAMT1 -0.76 0.31 -0.32
40 AT1G06790 RNA polymerase Rpb7 N-terminal domain-containing protein 0.76 0.32 -0.32
41 AT3G14840 Leucine-rich repeat transmembrane protein kinase 0.76 0.32 -0.32
42 AT5G38895 RING/U-box superfamily protein -0.76 0.31 -0.3
43 AT1G51090 Heavy metal transport/detoxification superfamily protein -0.76 0.32 -0.29
44 AT3G56880 VQ motif-containing protein -0.76 0.32 -0.35
45 AT3G28007 Nodulin MtN3 family protein AtSWEET4, SWEET4 -0.76 0.31 -0.32
46 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.76 0.32 -0.32
47 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 -0.76 0.32 -0.33
48 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 -0.76 0.32 -0.33
49 AT1G05055 general transcription factor II H2 ATGTF2H2, general transcription
factor II H2		 0.76 0.29 -0.3
50 AT4G16190 Papain family cysteine protease -0.76 0.31 -0.33
51 AT1G15810 S15/NS1, RNA-binding protein 0.75 0.34 -0.31
52 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.3 -0.28
53 AT1G65840 polyamine oxidase 4 polyamine oxidase 4, polyamine
oxidase 4		 0.75 0.3 -0.3
54 AT1G48960 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.75 0.29 -0.31
55 AT2G24420 DNA repair ATPase-related -0.75 0.34 -0.31
56 AT2G17990 BEST Arabidopsis thaliana protein match is:
kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to
6129 proteins in 783 species: Archae - 220; Bacteria -
1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses -
38; Other Eukaryotes - 1653 (source: NCBI BLink).		 -0.75 0.31 -0.32
57 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.75 0.3 -0.32
58 AT4G21410 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 cysteine-rich RLK (RECEPTOR-like
protein kinase) 29		 0.75 0.31 -0.32
59 AT3G25540 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 LONGEVITY ASSURANCE GENE 1 0.75 0.33 -0.3
60 AT4G30190 H(+)-ATPase 2 H(+)-ATPase 2, H(+)-ATPase 2,
PLASMA MEMBRANE PROTON ATPASE 2		 0.75 0.33 -0.31
61 AT5G27280 Zim17-type zinc finger protein -0.75 0.31 -0.31
62 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.75 0.29 -0.31
63 AT3G14067 Subtilase family protein -0.74 0.32 -0.34
64 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 -0.74 0.31 -0.31
65 AT3G22750 Protein kinase superfamily protein 0.74 0.31 -0.31
66 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.32 -0.34
67 AT5G01990 Auxin efflux carrier family protein -0.74 0.31 -0.32
68 AT4G00390 DNA-binding storekeeper protein-related transcriptional
regulator		 0.74 0.31 -0.33
69 AT4G25090 Riboflavin synthase-like superfamily protein 0.74 0.32 -0.31
70 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.74 0.33 -0.31
71 AT5G45480 Protein of unknown function (DUF594) 0.74 0.29 -0.31
72 AT1G76990 ACT domain repeat 3 ACT domain repeat 3 0.74 0.31 -0.31
73 AT4G11290 Peroxidase superfamily protein 0.74 0.31 -0.33
74 AT4G32770 tocopherol cyclase, chloroplast / vitamin E deficient 1
(VTE1) / sucrose export defective 1 (SXD1)		 SUCROSE EXPORT DEFECTIVE 1,
VITAMIN E DEFICIENT 1		 -0.74 0.34 -0.3
75 AT1G80450 VQ motif-containing protein -0.74 0.33 -0.31
76 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.73 0.32 -0.33
77 AT3G02480 Late embryogenesis abundant protein (LEA) family protein -0.73 0.34 -0.33
78 AT1G73480 alpha/beta-Hydrolases superfamily protein -0.73 0.3 -0.3
79 AT3G55740 proline transporter 2 PROLINE TRANSPORTER 2, proline
transporter 2		 -0.73 0.3 -0.3
80 AT5G40040 60S acidic ribosomal protein family 0.73 0.31 -0.32
81 AT5G51890 Peroxidase superfamily protein -0.73 0.3 -0.32
82 AT2G43290 Calcium-binding EF-hand family protein multicopy suppressors of snf4
deficiency in yeast 3		 -0.73 0.32 -0.3
83 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.73 0.32 -0.31
84 AT5G62020 heat shock transcription factor B2A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR B2A, heat
shock transcription factor B2A		 -0.73 0.32 -0.3
85 AT5G05420 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.73 0.3 -0.32
86 AT3G14310 pectin methylesterase 3 pectin methylesterase 3, pectin
methylesterase 3		 0.73 0.31 -0.31
87 AT2G35900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 32 Blast hits to 32 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.73 0.33 -0.29
88 AT2G38465 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; Has 16 Blast hits to 16 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.73 0.32 -0.31
89 AT4G36830 GNS1/SUR4 membrane protein family HOS3-1 -0.73 0.3 -0.34
90 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.73 0.31 -0.32
91 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.31
92 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.73 0.32 -0.3
93 AT3G61100 Putative endonuclease or glycosyl hydrolase 0.73 0.31 -0.32
94 AT1G61740 Sulfite exporter TauE/SafE family protein 0.73 0.34 -0.33
95 AT4G26720 protein phosphatase X 1 PROTEIN PHOSPHATASE X-1, protein
phosphatase X 1		 0.73 0.3 -0.34
96 AT2G20740 Tetraspanin family protein -0.73 0.33 -0.33
97 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.73 0.34 -0.33
98 AT5G03840 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TERMINAL FLOWER 1, TERMINAL FLOWER
1		 0.73 0.31 -0.33
99 AT3G20560 PDI-like 5-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 12, PDI-like
5-3, PROTEIN DISULFIDE ISOMERASE
12, PDI-like 5-3		 0.73 0.31 -0.33
100 AT5G66650 Protein of unknown function (DUF607) -0.72 0.32 -0.32
101 AT1G05700 Leucine-rich repeat transmembrane protein kinase protein 0.72 0.3 -0.31
102 AT4G17890 ARF-GAP domain 8 ARF-GAP domain 8 0.72 0.31 -0.34
103 AT3G07950 rhomboid protein-related 0.72 0.31 -0.34
104 AT1G04590 BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.72 0.32 -0.31
105 AT5G13200 GRAM domain family protein -0.72 0.34 -0.32
106 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 -0.72 0.3 -0.33
107 AT3G27640 Transducin/WD40 repeat-like superfamily protein 0.72 0.33 -0.3
108 AT5G20640 Protein of unknown function (DUF567) 0.72 0.32 -0.31
109 AT5G52660 Homeodomain-like superfamily protein -0.72 0.34 -0.32
110 AT1G62430 CDP-diacylglycerol synthase 1 CDP-diacylglycerol synthase 1,
CDP-diacylglycerol synthase 1		 -0.72 0.32 -0.34
111 AT1G29470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.3 -0.3
112 AT2G21220 SAUR-like auxin-responsive protein family 0.72 0.3 -0.31
113 AT2G35610 xyloglucanase 113 xyloglucanase 113 0.72 0.32 -0.32
114 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 0.72 0.29 -0.31
115 AT1G12020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits
to 88 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.72 0.32 -0.31
116 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 -0.72 0.3 -0.31
117 AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family
protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 0.72 0.32 -0.32
118 AT5G65880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.72 0.31 -0.3
119 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.72 0.3 -0.3
120 AT5G45630 Protein of unknown function, DUF584 -0.71 0.3 -0.34
121 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 -0.71 0.31 -0.32
122 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.3 -0.3
123 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a -0.71 0.31 -0.32
124 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.71 0.32 -0.3
125 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.71 0.3 -0.33
126 AT1G68570 Major facilitator superfamily protein -0.71 0.31 -0.32
127 AT4G35300 tonoplast monosaccharide transporter2 tonoplast monosaccharide
transporter2		 -0.71 0.29 -0.31
128 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.71 0.32 -0.32
129 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.7 0.3 -0.32
130 AT4G32940 gamma vacuolar processing enzyme gamma vacuolar processing enzyme,
GAMMAVPE		 -0.7 0.31 -0.32
131 AT3G23280 XB3 ortholog 5 in Arabidopsis thaliana XB3 ortholog 5 in Arabidopsis
thaliana		 -0.69 0.31 -0.3
132 AT5G05230 RING/U-box superfamily protein -0.69 0.31 -0.31
133 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.69 0.32 -0.28
134 AT1G07745 homolog of RAD51 D ATRAD51D, homolog of RAD51 D,
SUPPRESOR OF SNI1		 -0.69 0.31 -0.32
135 AT5G67180 target of early activation tagged (EAT) 3 target of early activation tagged
(EAT) 3		 -0.69 0.3 -0.31
136 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.69 0.33 -0.3
137 AT5G01880 RING/U-box superfamily protein -0.69 0.33 -0.31
138 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.69 0.32 -0.3
139 AT3G17800 Protein of unknown function (DUF760) -0.69 0.32 -0.32
140 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.69 0.3 -0.31
141 AT4G22740 glycine-rich protein -0.69 0.32 -0.33
142 AT2G47180 galactinol synthase 1 galactinol synthase 1, galactinol
synthase 1		 -0.69 0.31 -0.3
143 AT4G18880 heat shock transcription factor A4A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A4A, heat
shock transcription factor A4A		 -0.69 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
144 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.84 0.44 -0.46
145 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.79 0.43 -0.45 C0225
146 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.77 0.45 -0.44 C0210
147 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.76 0.44 -0.44 C0109
148 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.73 0.44 -0.47 C0107