AT4G00650 : FLOWERING LOCUS A
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AGICode AT4G00650
Description FRIGIDA-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00650 FRIGIDA-like protein FLOWERING LOCUS A, FRIGIDA 1 0.31 -0.31
2 AT1G17615 Disease resistance protein (TIR-NBS class) 0.74 0.29 -0.34
3 AT3G06433 pseudogene of nodulin MtN3 family protein 0.7 0.32 -0.31
4 AT1G58160 Mannose-binding lectin superfamily protein 0.67 0.3 -0.31
5 AT1G61210 Transducin/WD40 repeat-like superfamily protein DWD hypersensitive to ABA 3 0.66 0.3 -0.31
6 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
-0.66 0.29 -0.31
7 AT5G35240 transposable element gene 0.65 0.3 -0.32
8 AT4G04980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast
hits to 15699 proteins in 1063 species: Archae - 116;
Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants -
3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI
BLink).
0.65 0.35 -0.31
9 AT3G10120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits
to 57 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.64 0.29 -0.33
10 AT2G46480 galacturonosyltransferase 2 galacturonosyltransferase 2,
GALACTURONOSYLTRANSFERASE 2
0.63 0.32 -0.31
11 AT1G24000 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
0.61 0.29 -0.32
12 AT5G20310 Adenine nucleotide alpha hydrolases-like superfamily
protein
0.61 0.32 -0.31
13 AT1G33070 MADS-box family protein 0.61 0.31 -0.32
14 AT4G39010 glycosyl hydrolase 9B18 glycosyl hydrolase 9B18, glycosyl
hydrolase 9B18
0.6 0.32 -0.3
15 AT1G69100 Eukaryotic aspartyl protease family protein 0.59 0.3 -0.31
16 AT1G01060 Homeodomain-like superfamily protein LATE ELONGATED HYPOCOTYL, LATE
ELONGATED HYPOCOTYL 1
0.58 0.33 -0.3
17 AT1G77410 beta-galactosidase 16 beta-galactosidase 16 0.58 0.32 -0.33
18 AT2G41610 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).
0.58 0.34 -0.32
19 AT3G17310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
AtDRM3, domains rearranged
methyltransferase 3
0.57 0.32 -0.33
20 AT3G61910 NAC domain protein 66 NAC domain protein 66, NAC domain
protein 66, NAC SECONDARY WALL
THICKENING PROMOTING FACTOR2
0.57 0.31 -0.33
21 AT3G10810 zinc finger (C3HC4-type RING finger) family protein 0.56 0.31 -0.32
22 AT4G33440 Pectin lyase-like superfamily protein 0.56 0.33 -0.31
23 AT2G04420 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein
0.56 0.31 -0.32
24 AT1G79310 metacaspase 7 metacaspase 7, metacaspase 2a,
metacaspase 7, metacaspase 2a
-0.56 0.31 -0.31
25 AT3G20700 F-box associated ubiquitination effector family protein 0.56 0.3 -0.32
26 AT4G03600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.55 0.32 -0.31
27 AT5G61360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits
to 20 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).
-0.55 0.33 -0.33
28 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein 0.55 0.31 -0.33
29 AT3G30320 unknown protein; Has 15 Blast hits to 13 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.55 0.32 -0.31
30 AT1G55050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G09040.1); Has 2440 Blast hits to 1999 proteins in
271 species: Archae - 0; Bacteria - 138; Metazoa - 960;
Fungi - 166; Plants - 162; Viruses - 14; Other Eukaryotes -
1000 (source: NCBI BLink).
0.55 0.29 -0.34
31 AT2G23770 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein
-0.55 0.32 -0.32
32 AT4G12160 pseudogene, 40S ribosomal protein S9 (RPS9A), ribosomal
protein S9.e - slime mold,PIR1:R3DO24; blastp match of 56%
identity and 7.2e-09 P-value to SP|P17959|RS9_TRYBB
Probable 40S ribosomal protein S9. {Trypanosoma brucei
brucei}
0.55 0.32 -0.34
33 AT4G11760 low-molecular-weight cysteine-rich 17 low-molecular-weight cysteine-rich
17
0.55 0.31 -0.31
34 AT4G00955 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana
protein match is: Protein kinase superfamily protein
(TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.55 0.31 -0.3
35 AT5G09640 serine carboxypeptidase-like 19 serine carboxypeptidase-like 19,
SINAPOYLGLUCOSE ACCUMULATOR 2
0.55 0.32 -0.32
36 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 0.54 0.32 -0.32
37 AT5G10420 MATE efflux family protein 0.54 0.3 -0.32
38 AT3G63270 CONTAINS InterPro DOMAIN/s: Putative harbinger
transposase-derived nuclease (InterPro:IPR006912); BEST
Arabidopsis thaliana protein match is: PIF / Ping-Pong
family of plant transposases (TAIR:AT3G55350.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.54 0.31 -0.33
39 AT2G27520 F-box and associated interaction domains-containing protein -0.54 0.31 -0.31
40 AT5G20710 beta-galactosidase 7 beta-galactosidase 7 0.54 0.32 -0.31
41 AT5G07850 HXXXD-type acyl-transferase family protein 0.54 0.32 -0.3
42 AT1G74170 receptor like protein 13 receptor like protein 13, receptor
like protein 13
0.54 0.32 -0.32
43 AT4G15980 Plant invertase/pectin methylesterase inhibitor superfamily 0.54 0.33 -0.34
44 AT2G33870 RAB GTPase homolog A1H RAB GTPase homolog A1H 0.53 0.32 -0.33
45 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.31 -0.32
46 AT1G53345 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in
75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi
- 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37
(source: NCBI BLink).
-0.53 0.32 -0.3
47 AT1G50040 Protein of unknown function (DUF1005) -0.53 0.32 -0.34
48 AT2G02300 phloem protein 2-B5 phloem protein 2-B5, phloem
protein 2-B5
-0.53 0.31 -0.3
49 AT4G12270 Copper amine oxidase family protein -0.53 0.31 -0.31
50 AT5G41780 myosin heavy chain-related 0.53 0.3 -0.3
51 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
0.52 0.32 -0.31
52 AT3G52510 F-box associated ubiquitination effector family protein 0.52 0.3 -0.32
53 AT4G27850 Glycine-rich protein family 0.52 0.33 -0.32
54 AT1G77080 K-box region and MADS-box transcription factor family
protein
AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1
0.52 0.33 -0.31
55 AT5G45500 RNI-like superfamily protein 0.51 0.31 -0.32
56 AT4G39380 BEST Arabidopsis thaliana protein match is: TSL-kinase
interacting protein 1 (TAIR:AT2G36960.3); Has 80 Blast hits
to 74 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).
-0.51 0.34 -0.33
57 AT5G34450 transposable element gene 0.51 0.31 -0.31
58 AT1G06225 CLAVATA3/ESR-RELATED 3 CLAVATA3/ESR-RELATED 3 0.51 0.3 -0.32
59 AT2G30290 VACUOLAR SORTING RECEPTOR 2 AtVSR2, binding protein of 80 kDa
1;2, VACUOLAR SORTING RECEPTOR
1;2, VACUOLAR SORTING RECEPTOR 2
0.51 0.33 -0.33
60 AT5G11300 mitotic-like cyclin 3B from Arabidopsis CYC2BAT, mitotic-like cyclin 3B
from Arabidopsis, CYCLIN A2;2
0.51 0.32 -0.32
61 AT5G46360 Ca2+ activated outward rectifying K+ channel 3 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 3, Ca2+ activated
outward rectifying K+ channel 3
-0.51 0.29 -0.32
62 AT4G19600 Cyclin family protein CYCT1;4 -0.5 0.33 -0.33
63 AT2G05350 unknown protein; Has 22 Blast hits to 16 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.5 0.32 -0.3
64 AT3G52270 Transcription initiation factor IIF, beta subunit -0.5 0.35 -0.33
65 AT2G01500 Homeodomain-like superfamily protein HIGH EXPRESSION OF OSMOTICALLY
RESPONSIVE GENE 9, PRETTY FEW
SEEDS 2, WUSCHEL RELATED HOMEOBOX
6
0.5 0.29 -0.32
66 AT3G58230 Ubiquitin-specific protease family C19-related protein -0.49 0.32 -0.3
67 AT4G38760 Protein of unknown function (DUF3414) 0.49 0.31 -0.31
68 AT1G62350 Pentatricopeptide repeat (PPR) superfamily protein 0.49 0.3 -0.32
69 AT5G56110 myb domain protein 103 myb domain protein 103,
ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 80, MALE STERILE 188, myb
domain protein 103, MYB80
0.49 0.32 -0.31
70 AT5G35770 Transducin/WD40 repeat-like superfamily protein STERILE APETALA 0.49 0.32 -0.31
71 AT5G25060 RNA recognition motif (RRM)-containing protein 0.49 0.32 -0.31
72 AT1G22170 Phosphoglycerate mutase family protein -0.48 0.33 -0.33
73 AT2G22440 BEST Arabidopsis thaliana protein match is: Ribonuclease
H-like superfamily protein (TAIR:AT4G29090.1); Has 208
Blast hits to 191 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
-0.48 0.32 -0.31
74 AT1G22240 pumilio 8 pumilio 8, pumilio 8 -0.47 0.29 -0.3
75 AT2G06660 transposable element gene -0.45 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
76 C0180 MST_2539.9 - - - -0.69 0.46 -0.46
77 C0096 Gluconic acid - D-Gluconate - 0.62 0.47 -0.44 C0096