AT4G00420 : -
Query Information
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AGICode AT4G00420
Description Double-stranded RNA-binding domain (DsRBD)-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 1 0.31 -0.3
2 AT2G37975 Yos1-like protein 0.76 0.31 -0.33
3 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS -0.73 0.31 -0.33
4 AT2G23360 Plant protein of unknown function (DUF869) -0.73 0.32 -0.28
5 AT2G24070 Family of unknown function (DUF566) QWRF domain containing 4 -0.73 0.3 -0.32
6 AT1G68000 phosphatidylinositol synthase 1 PHOSPHATIDYLINOSITOL SYNTHASE,
phosphatidylinositol synthase 1,
phosphatidylinositol synthase 1		 0.73 0.31 -0.31
7 AT4G30300 non-intrinsic ABC protein 15 ATP-binding cassette E3,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 15, non-intrinsic ABC
protein 15		 -0.73 0.33 -0.31
8 AT2G31100 alpha/beta-Hydrolases superfamily protein -0.72 0.32 -0.29
9 AT1G77405 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.3 -0.32
10 AT3G25260 Major facilitator superfamily protein -0.72 0.31 -0.32
11 AT4G37880 LisH/CRA/RING-U-box domains-containing protein 0.72 0.32 -0.3
12 AT2G16260 pseudogene of glycine-rich RNA-binding protein glycine-rich RNA-binding protein 1 -0.72 0.31 -0.29
13 AT4G16444 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
CHD5-like protein (InterPro:IPR007514); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.71 0.33 -0.33
14 ATMG00400 hypothetical protein ORF157 -0.71 0.31 -0.33
15 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 -0.71 0.3 -0.32
16 AT2G05200 transposable element gene -0.71 0.32 -0.31
17 AT1G79950 RAD3-like DNA-binding helicase protein -0.71 0.33 -0.33
18 AT2G18245 alpha/beta-Hydrolases superfamily protein 0.71 0.32 -0.32
19 AT2G22630 AGAMOUS-like 17 AGAMOUS-like 17 0.71 0.31 -0.31
20 AT2G07070 transposable element gene -0.7 0.29 -0.31
21 AT2G01790 TRAF-like family protein -0.7 0.32 -0.33
22 AT2G04330 transposable element gene -0.7 0.31 -0.31
23 AT5G46310 WRKY family transcription factor -0.7 0.3 -0.34
24 AT2G16210 Transcriptional factor B3 family protein -0.7 0.31 -0.31
25 AT5G13380 Auxin-responsive GH3 family protein -0.69 0.32 -0.31
26 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.33 -0.32
27 AT2G37670 Transducin/WD40 repeat-like superfamily protein -0.69 0.3 -0.32
28 AT5G15110 Pectate lyase family protein -0.69 0.3 -0.31
29 AT5G17690 like heterochromatin protein (LHP1) AtLHP1, LIKE HETEROCHROMATIN
PROTEIN 1, TERMINAL FLOWER 2		 -0.68 0.33 -0.31
30 AT2G23940 Protein of unknown function (DUF788) 0.68 0.33 -0.32
31 AT3G22070 proline-rich family protein 0.68 0.34 -0.3
32 AT2G15750 transposable element gene -0.68 0.3 -0.32
33 AT5G13150 exocyst subunit exo70 family protein C1 exocyst subunit exo70 family
protein C1, exocyst subunit exo70
family protein C1		 -0.68 0.3 -0.31
34 AT1G53930 Ubiquitin-like superfamily protein 0.68 0.33 -0.32
35 AT3G13170 Spo11/DNA topoisomerase VI, subunit A protein ATSPO11-1 -0.68 0.28 -0.31
36 AT4G33450 myb domain protein 69 MYB DOMAIN PROTEIN 69, myb domain
protein 69		 -0.68 0.3 -0.34
37 AT2G11360 transposable element gene -0.67 0.31 -0.33
38 AT5G65510 AINTEGUMENTA-like 7 AINTEGUMENTA-like 7, PLETHORA 7 -0.67 0.31 -0.33
39 AT1G62820 Calcium-binding EF-hand family protein 0.67 0.32 -0.33
40 AT2G29770 Galactose oxidase/kelch repeat superfamily protein -0.67 0.33 -0.31
41 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 0.67 0.32 -0.33
42 AT1G69990 Leucine-rich repeat protein kinase family protein -0.67 0.33 -0.29
43 AT5G26700 RmlC-like cupins superfamily protein -0.67 0.32 -0.34
44 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 0.67 0.31 -0.3
45 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 -0.66 0.33 -0.35
46 AT5G03250 Phototropic-responsive NPH3 family protein -0.66 0.31 -0.32
47 AT1G30010 Intron maturase, type II family protein -0.66 0.33 -0.34
48 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 -0.66 0.33 -0.34
49 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.66 0.31 -0.3
50 AT3G42960 TAPETUM 1 ASD, TAPETUM 1, TAPETUM1 -0.66 0.32 -0.34
51 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.32 -0.33
52 AT4G02190 Cysteine/Histidine-rich C1 domain family protein 0.66 0.32 -0.31
53 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 0.66 0.34 -0.31
54 AT4G29285 low-molecular-weight cysteine-rich 24 low-molecular-weight cysteine-rich
24		 -0.66 0.31 -0.33
55 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.66 0.33 -0.33
56 AT2G02660 F-box associated ubiquitination effector family protein 0.66 0.29 -0.3
57 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 -0.66 0.3 -0.31
58 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.66 0.31 -0.3
59 AT2G29220 Concanavalin A-like lectin protein kinase family protein -0.66 0.32 -0.34
60 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 -0.66 0.3 -0.32
61 AT4G25350 EXS (ERD1/XPR1/SYG1) family protein SHORT HYPOCOTYL UNDER BLUE1 -0.66 0.3 -0.33
62 AT3G59130 Cysteine/Histidine-rich C1 domain family protein 0.66 0.31 -0.34
63 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 -0.65 0.34 -0.3
64 AT1G14070 fucosyltransferase 7 fucosyltransferase 7 -0.65 0.3 -0.31
65 AT3G42350 transposable element gene -0.65 0.31 -0.3
66 AT2G35590 pseudogene, serpin (serine protease inhibitor), putative,
similar to protein zx (Hordeum vulgare subsp. vulgare)
GI:19071, serpin (Triticum aestivum) GI:1885346; contains
Pfam profile PF00079: Serpin (serine protease inhibitor);
this is very likely a pseudogene.; blastp match of 52%
identity and 2.2e-73 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.65 0.31 -0.3
67 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.65 0.29 -0.31
68 AT2G33460 ROP-interactive CRIB motif-containing protein 1 ROP-interactive CRIB
motif-containing protein 1		 -0.65 0.34 -0.34
69 AT5G19630 alpha/beta-Hydrolases superfamily protein 0.65 0.3 -0.28
70 AT1G42460 transposable element gene -0.65 0.33 -0.33
71 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.33 -0.32
72 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 -0.65 0.32 -0.28
73 AT3G42600 transposable element gene -0.65 0.28 -0.32
74 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.3 -0.32
75 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.65 0.29 -0.31
76 AT3G26870 Plant self-incompatibility protein S1 family -0.65 0.32 -0.3
77 AT3G42850 Mevalonate/galactokinase family protein -0.64 0.34 -0.32
78 AT4G10950 SGNH hydrolase-type esterase superfamily protein -0.64 0.32 -0.32
79 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 -0.64 0.33 -0.31
80 AT1G57650 ATP binding -0.64 0.33 -0.3
81 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.32 -0.31
82 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.31 -0.3
83 AT5G50910 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.33 -0.31
84 AT3G58770 unknown protein; Has 38 Blast hits to 36 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.64 0.31 -0.32
85 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 -0.64 0.32 -0.29
86 AT3G49162 pseudogene of glycoside hydrolase family 28 protein 0.64 0.32 -0.31
87 AT1G63190 Cystatin/monellin superfamily protein -0.64 0.31 -0.31
88 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.31 -0.31
89 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 -0.64 0.32 -0.29
90 AT5G58850 myb domain protein 119 MYB DOMAIN PROTEIN 119, myb domain
protein 119		 0.63 0.3 -0.32
91 AT4G35335 Nucleotide-sugar transporter family protein 0.63 0.32 -0.33
92 AT5G28410 unknown protein; Has 8 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.32 -0.33
93 AT1G63590 Receptor-like protein kinase-related family protein 0.63 0.32 -0.32
94 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family -0.63 0.32 -0.32
95 AT5G28880 transposable element gene -0.63 0.31 -0.33
96 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 0.63 0.32 -0.3
97 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.32 -0.31
98 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 -0.63 0.32 -0.3
99 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.3 -0.3
100 AT1G24010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.31 -0.31
101 AT1G20280 homeobox-leucine zipper protein-related -0.63 0.3 -0.31
102 AT3G30660 transposable element gene -0.63 0.31 -0.31
103 AT3G42460 transposable element gene -0.62 0.33 -0.32
104 AT4G18593 dual specificity protein phosphatase-related 0.62 0.35 -0.32
105 AT2G25560 DNAJ heat shock N-terminal domain-containing protein -0.62 0.34 -0.31
106 AT3G56600 Protein kinase superfamily protein 0.62 0.32 -0.33
107 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.62 0.31 -0.3
108 AT2G34980 phosphatidylinositolglycan synthase family protein SETH1 -0.62 0.32 -0.33
109 AT1G06970 cation/hydrogen exchanger 14 ATCHX14, cation/hydrogen exchanger
14		 0.62 0.29 -0.31
110 AT1G25460 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.31 -0.32
111 AT5G48270 Plant protein of unknown function (DUF868) -0.62 0.32 -0.32
112 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein -0.62 0.31 -0.3
113 AT1G68270 AMP-dependent synthetase and ligase family protein -0.62 0.32 -0.3
114 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 -0.62 0.31 -0.32
115 AT4G32540 Flavin-binding monooxygenase family protein YUCCA, YUCCA 1 0.62 0.31 -0.32
116 AT5G39370 Curculin-like (mannose-binding) lectin family protein 0.62 0.3 -0.32
117 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 0.62 0.31 -0.29
118 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 -0.62 0.31 -0.31
119 AT3G49850 telomere repeat binding factor 3 ATTRB3, TELOMERE-BINDING PROTEIN
2, telomere repeat binding factor
3		 0.62 0.32 -0.31
120 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.61 0.33 -0.33
121 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.3 -0.32
122 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 0.61 0.33 -0.36
123 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 -0.61 0.32 -0.31
124 AT2G21780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39360.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.33 -0.33
125 AT3G58740 citrate synthase 1 citrate synthase 1 -0.61 0.31 -0.32
126 AT1G17410 Nucleoside diphosphate kinase family protein 0.61 0.3 -0.31
127 AT3G08890 Protein of unknown function, DUF538 0.61 0.31 -0.3
128 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23		 0.61 0.3 -0.31
129 AT5G66960 Prolyl oligopeptidase family protein -0.61 0.31 -0.32
130 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39		 -0.61 0.32 -0.31
131 AT1G33890 Avirulence induced gene (AIG1) family protein -0.61 0.32 -0.32
132 AT5G11290 Plant protein of unknown function (DUF247) -0.61 0.29 -0.31
133 AT1G50760 Aminotransferase-like, plant mobile domain family protein -0.61 0.33 -0.29
134 AT2G43250 unknown protein; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.3
135 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 0.61 0.31 -0.32
136 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.61 0.32 -0.3
137 AT5G38310 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.31 -0.3
138 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 -0.61 0.32 -0.3
139 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.6 0.32 -0.31
140 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.6 0.31 -0.32
141 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.31 -0.31
142 AT5G58560 Phosphatidate cytidylyltransferase family protein farnesol kinase 0.6 0.31 -0.31
143 AT1G54470 RNI-like superfamily protein resistance to Peronospora
parasitica 27		 0.6 0.31 -0.31
144 AT1G27550 F-box family protein 0.6 0.33 -0.32
145 AT2G04032 zinc transporter 7 precursor zinc transporter 7 precursor 0.59 0.33 -0.32
146 AT3G51520 diacylglycerol acyltransferase family 0.59 0.3 -0.31
147 AT3G52760 Integral membrane Yip1 family protein 0.59 0.29 -0.32
148 AT4G30440 UDP-D-glucuronate 4-epimerase 1 UDP-D-glucuronate 4-epimerase 1 0.59 0.33 -0.31
149 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 0.58 0.3 -0.31
150 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 0.58 0.32 -0.32
151 AT1G11250 syntaxin of plants 125 ATSYP125, syntaxin of plants 125 0.58 0.34 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
152 C0188 Nicotine (-)-Nicotine Nicotine - -0.81 0.45 -0.47 C0188