AT4G00490 : beta-amylase 2
Query Information
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AGICode AT4G00490
Description beta-amylase 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00490 beta-amylase 2 beta-amylase 2, BETA-AMYLASE 9 1 0.33 -0.32
2 AT1G11580 methylesterase PCR A ATPMEPCRA, methylesterase PCR A -0.83 0.34 -0.31
3 AT3G19720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ACCUMULATION AND REPLICATION OF
CHLOROPLAST 5, Dynamin related
protein 5B		 0.81 0.32 -0.34
4 AT5G58140 phototropin 2 NON PHOTOTROPIC HYPOCOTYL 1-LIKE,
phototropin 2		 0.79 0.32 -0.33
5 AT3G19720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ACCUMULATION AND REPLICATION OF
CHLOROPLAST 5, Dynamin related
protein 5B		 0.79 0.31 -0.3
6 AT2G29630 thiaminC PYRIMIDINE REQUIRING, thiaminC 0.79 0.31 -0.32
7 AT3G02830 zinc finger protein 1 zinc finger protein 1 0.78 0.31 -0.29
8 AT5G03650 starch branching enzyme 2.2 starch branching enzyme 2.2 0.78 0.33 -0.31
9 AT1G67840 chloroplast sensor kinase chloroplast sensor kinase 0.78 0.31 -0.32
10 AT2G43610 Chitinase family protein -0.78 0.31 -0.32
11 AT3G03770 Leucine-rich repeat protein kinase family protein 0.78 0.31 -0.32
12 AT2G22190 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
E		 0.77 0.31 -0.31
13 AT2G24270 aldehyde dehydrogenase 11A3 aldehyde dehydrogenase 11A3 0.77 0.34 -0.34
14 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein 0.76 0.34 -0.34
15 AT1G11410 S-locus lectin protein kinase family protein 0.76 0.3 -0.32
16 AT1G54820 Protein kinase superfamily protein 0.76 0.32 -0.34
17 AT5G59090 subtilase 4.12 subtilase 4.12, subtilase 4.12 -0.76 0.31 -0.3
18 AT3G14610 cytochrome P450, family 72, subfamily A, polypeptide 7 cytochrome P450, family 72,
subfamily A, polypeptide 7		 -0.76 0.3 -0.32
19 AT3G29320 Glycosyl transferase, family 35 alpha-glucan phosphorylase 1 0.75 0.3 -0.32
20 AT5G43060 Granulin repeat cysteine protease family protein -0.75 0.32 -0.32
21 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 -0.75 0.3 -0.3
22 AT5G58750 NAD(P)-binding Rossmann-fold superfamily protein -0.75 0.33 -0.29
23 AT1G65900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to
306 proteins in 119 species: Archae - 19; Bacteria - 238;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.75 0.31 -0.31
24 AT5G11060 KNOTTED1-like homeobox gene 4 KNOTTED1-like homeobox gene 4 0.74 0.33 -0.33
25 AT1G09460 Carbohydrate-binding X8 domain superfamily protein -0.74 0.3 -0.32
26 AT5G26280 TRAF-like family protein -0.74 0.31 -0.33
27 AT5G44380 FAD-binding Berberine family protein -0.74 0.3 -0.32
28 AT1G27680 ADPGLC-PPase large subunit ADPGLC-PPase large subunit 0.74 0.33 -0.3
29 AT1G52870 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.74 0.29 -0.31
30 AT2G37750 unknown protein; Has 21 Blast hits to 21 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.3 -0.33
31 AT1G12845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.74 0.33 -0.29
32 AT1G20650 Protein kinase superfamily protein ALTERED SEED GERMINATION 5 0.74 0.32 -0.31
33 AT2G46380 Protein of unknown function (DUF3133) 0.73 0.33 -0.32
34 AT3G22104 Phototropic-responsive NPH3 family protein 0.73 0.31 -0.31
35 AT2G17440 plant intracellular ras group-related LRR 5 plant intracellular ras
group-related LRR 5		 -0.73 0.32 -0.32
36 AT1G24400 lysine histidine transporter 2 AMINO ACID TRANSPORTER-LIKE
PROTEIN 2, ARABIDOPSIS LYSINE
HISTIDINE TRANSPORTER 2, lysine
histidine transporter 2		 0.73 0.31 -0.32
37 AT3G18490 Eukaryotic aspartyl protease family protein 0.73 0.35 -0.32
38 AT1G03310 debranching enzyme 1 ARABIDOPSIS THALIANA ISOAMYLASE 2,
BRANCHING ENZYME 2, debranching
enzyme 1, ISA2		 0.73 0.31 -0.33
39 AT2G20570 GBF's pro-rich region-interacting factor 1 ARABIDOPSIS GOLDEN2-LIKE 1,
GOLDEN2-LIKE 1, GBF's pro-rich
region-interacting factor 1		 0.73 0.33 -0.32
40 AT2G34140 Dof-type zinc finger DNA-binding family protein -0.72 0.33 -0.3
41 AT1G49390 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.72 0.31 -0.33
42 AT1G14620 decoy DECOY -0.72 0.31 -0.32
43 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.72 0.32 -0.32
44 AT4G28706 pfkB-like carbohydrate kinase family protein 0.72 0.31 -0.31
45 AT1G12990 beta-1,4-N-acetylglucosaminyltransferase family protein 0.72 0.3 -0.32
46 AT4G28410 Tyrosine transaminase family protein -0.72 0.33 -0.32
47 AT3G56080 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.31 -0.32
48 AT5G19500 Tryptophan/tyrosine permease 0.72 0.31 -0.31
49 AT3G26770 NAD(P)-binding Rossmann-fold superfamily protein -0.72 0.32 -0.32
50 AT4G18810 NAD(P)-binding Rossmann-fold superfamily protein 0.72 0.32 -0.28
51 AT2G18890 Protein kinase superfamily protein 0.71 0.32 -0.33
52 AT1G29280 WRKY DNA-binding protein 65 WRKY DNA-BINDING PROTEIN 65, WRKY
DNA-binding protein 65		 -0.71 0.33 -0.32
53 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 0.71 0.31 -0.32
54 AT2G41090 Calcium-binding EF-hand family protein 0.71 0.32 -0.33
55 AT2G36390 starch branching enzyme 2.1 BRANCHING ENZYME 3, starch
branching enzyme 2.1		 0.71 0.32 -0.3
56 AT1G15380 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 4 -0.71 0.31 -0.31
57 AT2G35120 Single hybrid motif superfamily protein -0.71 0.31 -0.32
58 AT3G18500 DNAse I-like superfamily protein 0.71 0.34 -0.3
59 AT4G33560 Wound-responsive family protein -0.7 0.31 -0.31
60 AT3G27770 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G62960.1); Has 158 Blast hits to 157 proteins in
21 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi -
0; Plants - 141; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.7 0.32 -0.33
61 AT2G29650 phosphate transporter 4;1 anion transporter 1, phosphate
transporter 4;1		 0.7 0.32 -0.31
62 AT2G14900 Gibberellin-regulated family protein -0.7 0.3 -0.31
63 AT3G16350 Homeodomain-like superfamily protein -0.7 0.31 -0.33
64 AT3G27190 uridine kinase-like 2 uridine kinase-like 2 -0.7 0.3 -0.32
65 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 -0.7 0.33 -0.32
66 AT1G30130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1365
(InterPro:IPR010775); Has 1789 Blast hits to 1789 proteins
in 449 species: Archae - 0; Bacteria - 824; Metazoa - 0;
Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 920
(source: NCBI BLink).		 -0.69 0.32 -0.31
67 AT3G05920 Heavy metal transport/detoxification superfamily protein -0.69 0.31 -0.33
68 AT5G41460 Protein of unknown function (DUF604) 0.69 0.33 -0.31
69 ATCG00780 ribosomal protein L14 ribosomal protein L14 0.69 0.33 -0.3
70 AT1G67030 zinc finger protein 6 zinc finger protein 6 -0.69 0.31 -0.32
71 AT1G18360 alpha/beta-Hydrolases superfamily protein 0.69 0.3 -0.32
72 AT1G01640 BTB/POZ domain-containing protein -0.69 0.33 -0.32
73 AT1G22160 Protein of unknown function (DUF581) 0.69 0.3 -0.32
74 AT2G44790 uclacyanin 2 uclacyanin 2 -0.69 0.32 -0.32
75 AT4G22212 Arabidopsis defensin-like protein -0.69 0.32 -0.3
76 AT3G43430 RING/U-box superfamily protein -0.69 0.32 -0.31
77 AT4G02420 Concanavalin A-like lectin protein kinase family protein 0.68 0.31 -0.31
78 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 0.68 0.31 -0.31
79 AT1G67440 Minichromosome maintenance (MCM2/3/5) family protein embryo defective 1688 0.68 0.28 -0.31
80 AT3G13690 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.68 0.32 -0.33
81 AT3G24190 Protein kinase superfamily protein 0.68 0.31 -0.31
82 AT4G21600 endonuclease 5 endonuclease 5 -0.68 0.31 -0.33
83 AT5G57090 Auxin efflux carrier family protein AGRAVITROPIC ROOT, AGRAVITROPIC
ROOT 1, ARABIDOPSIS THALIANA
PIN-FORMED 2, ETHYLENE INSENSITIVE
ROOT 1, MM31, PIN-FORMED 2, WAVY
ROOTS 6		 -0.68 0.29 -0.32
84 AT5G05640 nucleoprotein-related -0.68 0.32 -0.3
85 AT3G45260 C2H2-like zinc finger protein 0.68 0.31 -0.34
86 AT1G70900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits
to 57 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.32
87 AT5G59440 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARABIDOPSIS THALIANA THYMIDYLATE
KINASE.1, ARABIDOPSIS THALIANA
THYMIDYLATE KINASE.2, ZEUS1		 -0.68 0.31 -0.3
88 AT4G39675 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.68 0.31 -0.31
89 AT5G40510 Sucrase/ferredoxin-like family protein -0.68 0.29 -0.3
90 AT5G59560 sensitivity to red light reduced protein (SRR1) SENSITIVITY TO RED LIGHT REDUCED 1 -0.68 0.3 -0.31
91 AT1G70190 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein
L7/L12, C-terminal/adaptor protein ClpS-like		 -0.67 0.32 -0.32
92 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.67 0.3 -0.33
93 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein 0.67 0.32 -0.31
94 AT1G76020 Thioredoxin superfamily protein 0.67 0.3 -0.3
95 AT5G14690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits
to 86 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.3 -0.31
96 AT5G61290 Flavin-binding monooxygenase family protein 0.67 0.32 -0.34
97 AT5G15120 Protein of unknown function (DUF1637) -0.67 0.32 -0.32
98 AT5G42720 Glycosyl hydrolase family 17 protein 0.67 0.33 -0.29
99 AT3G61250 myb domain protein 17 myb domain protein 17, LATE
MERISTEM IDENTITY2, myb domain
protein 17		 0.67 0.32 -0.3
100 AT4G00080 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 unfertilized embryo sac 11 -0.67 0.33 -0.34
101 AT5G04470 cyclin-dependent protein kinase inhibitors SIAMESE -0.67 0.33 -0.31
102 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.67 0.32 -0.29
103 AT5G39890 Protein of unknown function (DUF1637) -0.67 0.33 -0.34
104 AT5G05880 UDP-Glycosyltransferase superfamily protein -0.67 0.3 -0.31
105 AT3G16360 HPT phosphotransmitter 4 HPT phosphotransmitter 4 0.67 0.33 -0.3
106 AT3G19390 Granulin repeat cysteine protease family protein -0.67 0.32 -0.3
107 AT5G59520 ZRT/IRT-like protein 2 ZRT/IRT-like protein 2 -0.66 0.32 -0.31
108 AT1G61820 beta glucosidase 46 beta glucosidase 46 -0.66 0.32 -0.35
109 AT5G17820 Peroxidase superfamily protein -0.66 0.3 -0.32
110 AT4G27450 Aluminium induced protein with YGL and LRDR motifs -0.66 0.32 -0.31
111 AT3G16440 myrosinase-binding protein-like protein-300B myrosinase-binding protein-like
protein-300B, maternal effect
embryo arrest 36,
myrosinase-binding protein-like
protein-300B		 -0.66 0.33 -0.31
112 AT1G77330 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.32 -0.3
113 AT1G12160 Flavin-binding monooxygenase family protein -0.66 0.33 -0.31
114 AT5G05900 UDP-Glycosyltransferase superfamily protein -0.66 0.31 -0.31
115 AT3G15950 DNA topoisomerase-related NAI2 -0.65 0.31 -0.31
116 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.32 -0.32
117 AT5G40730 arabinogalactan protein 24 arabinogalactan protein 24,
ARABIDOPSIS THALIANA
ARABINOGALACTAN PROTEIN 24		 -0.65 0.32 -0.32
118 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 -0.65 0.33 -0.29
119 AT5G66985 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.3 -0.32
120 AT1G61040 plus-3 domain-containing protein vernalization independence 5 -0.64 0.33 -0.33
121 AT1G61590 Protein kinase superfamily protein -0.64 0.31 -0.32
122 AT5G26110 Protein kinase superfamily protein -0.64 0.33 -0.29
123 AT3G21510 histidine-containing phosphotransmitter 1 histidine-containing
phosphotransmitter 1		 -0.64 0.32 -0.3
124 AT2G17850 Rhodanese/Cell cycle control phosphatase superfamily
protein		 -0.64 0.31 -0.34
125 AT1G35580 cytosolic invertase 1 alkaline/neutral invertase G,
cytosolic invertase 1		 -0.64 0.34 -0.32
126 AT2G37340 arginine/serine-rich zinc knuckle-containing protein 33 arginine/serine-rich zinc
knuckle-containing protein 33,
ARGININE/SERINE-RICH ZINC
KNUCKLE-CONTAINING PROTEIN 33,
arginine/serine-rich zinc
knuckle-containing protein 33,
arginine/serine-rich zinc
knuckle-containing protein 33		 -0.64 0.33 -0.31
127 AT4G20210 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.64 0.3 -0.33
128 AT3G21720 isocitrate lyase isocitrate lyase -0.64 0.31 -0.32
129 AT1G76090 sterol methyltransferase 3 sterol methyltransferase 3 -0.64 0.32 -0.3
130 AT2G29330 tropinone reductase tropinone reductase -0.63 0.32 -0.3
131 AT1G20900 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 27, ESCAROLA, ORESARA 7		 -0.63 0.32 -0.32
132 AT4G17800 Predicted AT-hook DNA-binding family protein -0.63 0.32 -0.34
133 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 -0.63 0.33 -0.31
134 AT2G16060 hemoglobin 1 hemoglobin 1, ARATH GLB1, ATGLB1,
CLASS I HEMOGLOBIN, hemoglobin 1,
NSHB1		 -0.63 0.32 -0.3
135 AT2G32270 zinc transporter 3 precursor zinc transporter 3 precursor -0.63 0.34 -0.31
136 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 -0.63 0.31 -0.31
137 AT3G01790 Ribosomal protein L13 family protein -0.63 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
138 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.9 0.45 -0.44 C0133
139 C0070 Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl)xylosyl) 6''-O-(p-O-coumaroyl) glucoside] 5-O-[6''''-O-(malonyl) glucoside] - - - 0.87 0.45 -0.44
140 C0071 Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside - - - 0.86 0.44 -0.45
141 C0129 Kaempferol-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Kaempferol-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - kaempferol glucoside biosynthesis (Arabidopsis) 0.86 0.51 -0.44
142 C0182 MST_2996.4 - - - 0.83 0.48 -0.45
143 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - 0.82 0.46 -0.45
144 C0192 Oxalic acid - Oxalate ascorbate degradation 0.76 0.42 -0.46 C0192