AT4G00560 : -
Query Information
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AGICode AT4G00560
Description NAD(P)-binding Rossmann-fold superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein 1 0.33 -0.32
2 AT2G38280 AMP deaminase, putative / myoadenylate deaminase, putative ADENOSINE 5'-MONOPHOSPHATE
DEAMINASE, EMBRYONIC FACTOR1		 -0.71 0.3 -0.31
3 AT4G12690 Plant protein of unknown function (DUF868) 0.68 0.31 -0.32
4 AT5G17400 endoplasmic reticulum-adenine nucleotide transporter 1 endoplasmic reticulum-adenine
nucleotide transporter 1		 0.67 0.3 -0.32
5 AT2G40815 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.67 0.32 -0.32
6 AT1G14900 high mobility group A high mobility group A 0.67 0.31 -0.33
7 AT4G13830 DNAJ-like 20 DNAJ-like 20 0.66 0.28 -0.3
8 AT3G16010 Pentatricopeptide repeat (PPR-like) superfamily protein 0.66 0.32 -0.3
9 AT4G23440 Disease resistance protein (TIR-NBS class) 0.66 0.3 -0.34
10 AT5G05800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.65 0.3 -0.32
11 AT4G28240 Wound-responsive family protein 0.65 0.31 -0.3
12 AT3G06590 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.65 0.31 -0.31
13 AT5G27540 MIRO-related GTP-ase 1 embryo defective 2473,
MIRO-related GTP-ase 1		 -0.64 0.32 -0.3
14 AT1G53690 DNA directed RNA polymerase, 7 kDa subunit 0.64 0.31 -0.32
15 AT4G24130 Protein of unknown function, DUF538 -0.63 0.32 -0.31
16 AT4G18710 Protein kinase superfamily protein SHAGGY-LIKE KINASE 21,
BRASSINOSTEROID-INSENSITIVE 2,
DWARF 12, SHAGGY-LIKE KINASE 21,
ULTRACURVATA 1		 0.63 0.32 -0.32
17 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 -0.63 0.32 -0.33
18 AT4G24120 YELLOW STRIPE like 1 YELLOW STRIPE LIKE 1, YELLOW
STRIPE like 1		 -0.63 0.3 -0.34
19 AT5G16110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast
hits to 133 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.32
20 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 0.62 0.3 -0.32
21 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family -0.62 0.32 -0.34
22 AT5G44570 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, hypocotyl,
sepal, flower, leaf; EXPRESSED DURING: petal
differentiation and expansion stage, LP.08 eight leaves
visible; Has 7 Blast hits to 7 proteins in 2 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.33
23 AT5G47390 myb-like transcription factor family protein 0.62 0.32 -0.3
24 AT2G43160 ENTH/VHS family protein -0.61 0.31 -0.31
25 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family
protein		 -0.61 0.32 -0.31
26 AT2G31760 RING/U-box superfamily protein ARIADNE 10, ARABIDOPSIS ARIADNE 10 -0.61 0.32 -0.3
27 AT1G68650 Uncharacterized protein family (UPF0016) -0.61 0.31 -0.32
28 AT1G07890 ascorbate peroxidase 1 ascorbate peroxidase 1, ATAPX01,
ATAPX1, CS1, maternal effect
embryo arrest 6		 -0.6 0.32 -0.29
29 AT3G50250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.32 -0.31
30 AT2G46340 SPA (suppressor of phyA-105) protein family SUPPRESSOR OF PHYA-105 1 -0.6 0.33 -0.33
31 AT2G47700 RING/U-box superfamily protein RED AND FAR-RED INSENSITIVE 2 0.6 0.33 -0.34
32 AT5G63190 MA3 domain-containing protein 0.6 0.34 -0.31
33 AT4G25780 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.6 0.32 -0.34
34 AT3G60530 GATA transcription factor 4 GATA transcription factor 4 0.59 0.29 -0.32
35 AT2G35720 DNAJ heat shock N-terminal domain-containing protein ORIENTATION UNDER VERY LOW
FLUENCES OF LIGHT 1		 -0.59 0.33 -0.31
36 AT5G05550 sequence-specific DNA binding transcription factors 0.59 0.32 -0.3
37 AT5G15400 U-box domain-containing protein -0.59 0.32 -0.31
38 AT5G16310 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH1 0.59 0.32 -0.34
39 AT3G19860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 121 0.59 0.31 -0.3
40 AT3G24630 unknown protein; Has 5348 Blast hits to 3182 proteins in
353 species: Archae - 0; Bacteria - 481; Metazoa - 1959;
Fungi - 405; Plants - 180; Viruses - 10; Other Eukaryotes -
2313 (source: NCBI BLink).		 0.59 0.3 -0.3
41 AT5G23520 smr (Small MutS Related) domain-containing protein -0.58 0.32 -0.32
42 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH 0.58 0.32 -0.32
43 AT3G15355 ubiquitin-conjugating enzyme 25 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 1, ubiquitin-conjugating
enzyme 25		 0.58 0.32 -0.33
44 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 -0.58 0.35 -0.32
45 AT1G61290 syntaxin of plants 124 ATSYP124, syntaxin of plants 124 -0.58 0.35 -0.33
46 AT2G18420 Gibberellin-regulated family protein -0.58 0.32 -0.32
47 AT3G22910 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.58 0.31 -0.33
48 AT1G33660 peroxidase family protein -0.58 0.3 -0.3
49 AT1G33060 NAC 014 NAC 014, NAC 014 0.58 0.3 -0.31
50 AT3G03080 Zinc-binding dehydrogenase family protein -0.57 0.32 -0.32
51 AT5G52620 F-box associated ubiquitination effector family protein 0.57 0.31 -0.32
52 AT2G19470 casein kinase I-like 5 casein kinase I-like 5 -0.57 0.33 -0.33
53 AT3G62980 F-box/RNI-like superfamily protein AtTIR1, TRANSPORT INHIBITOR
RESPONSE 1		 0.57 0.31 -0.32
54 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.57 0.31 -0.31
55 AT5G60230 splicing endonuclease 2 SPLICING ENDONUCLEASE 2, splicing
endonuclease 2		 0.56 0.32 -0.31
56 AT5G37370 PRP38 family protein ATSRL1 -0.56 0.31 -0.31
57 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 0.56 0.31 -0.31
58 AT5G42190 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 Arabidopsis SKP-like 2, SKP1B 0.55 0.29 -0.31
59 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein -0.55 0.35 -0.31
60 AT5G04890 HSP20-like chaperones superfamily protein RESTRICTED TEV MOVEMENT 2 -0.55 0.29 -0.34
61 AT5G66620 DA1-related protein 6 DA1-related protein 6 -0.55 0.32 -0.3
62 AT3G28790 Protein of unknown function (DUF1216) 0.55 0.32 -0.3
63 AT3G44340 clone eighty-four clone eighty-four -0.54 0.32 -0.3
64 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 0.54 0.33 -0.31
65 AT3G60800 DHHC-type zinc finger family protein -0.54 0.33 -0.33
66 AT1G03960 Calcium-binding EF hand family protein -0.54 0.32 -0.32
67 AT5G64990 RAB GTPase homolog H1A RAB GTPase homolog H1A, RAB GTPase
homolog H1A		 -0.54 0.33 -0.32
68 AT4G24880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.31 -0.3
69 AT1G16420 metacaspase 8 ARABIDOPSIS THALIANA METACASPASE
8, metacaspase 2e, metacaspase 8,
metacaspase 2e		 -0.54 0.31 -0.33
70 AT1G53060 Legume lectin family protein 0.54 0.29 -0.32
71 AT5G10710 INVOLVED IN: chromosome segregation, cell division; LOCATED
IN: chromosome, centromeric region, nucleus; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O
(InterPro:IPR018464); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.53 0.31 -0.29
72 AT5G04840 bZIP protein -0.53 0.32 -0.31
73 AT5G02010 RHO guanyl-nucleotide exchange factor 7 ATROPGEF7, RHO guanyl-nucleotide
exchange factor 7		 0.53 0.3 -0.33
74 AT5G35890 Beta-galactosidase related protein 0.53 0.34 -0.31
75 AT1G17000 trehalose-phosphatase/synthase 3 trehalose-phosphatase/synthase 3,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S3, trehalose-phosphatase/synthase
3		 -0.53 0.31 -0.33
76 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family -0.53 0.31 -0.32
77 AT3G07860 Ubiquitin-like superfamily protein -0.52 0.34 -0.31
78 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 0.52 0.29 -0.32
79 AT4G04490 cysteine-rich RLK (RECEPTOR-like protein kinase) 36 cysteine-rich RLK (RECEPTOR-like
protein kinase) 36		 -0.52 0.29 -0.31
80 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.52 0.31 -0.28
81 AT3G44140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.33 -0.34
82 ATMG00890 hypothetical protein ORF106D -0.51 0.31 -0.33
83 AT4G07990 Chaperone DnaJ-domain superfamily protein -0.51 0.35 -0.34
84 AT5G56080 nicotianamine synthase 2 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 2, nicotianamine synthase
2		 -0.51 0.3 -0.3
85 AT1G79940 DnaJ / Sec63 Brl domains-containing protein ATERDJ2A -0.51 0.3 -0.33
86 AT3G45820 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.31 -0.31
87 AT2G45780 other RNA -0.51 0.29 -0.33
88 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 -0.51 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.79 0.47 -0.44 C0228
90 C0145 Maltotetraose - Maltotetraose starch degradation II -0.73 0.49 -0.46 C0145