AT4G00150 : ARABIDOPSIS THALIANA HAIRY MERISTEM 3
Query Information
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AGICode AT4G00150
Description GRAS family transcription factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 1 0.32 -0.3
2 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.72 0.32 -0.31
3 AT1G19510 RAD-like 5 RAD-like 5, RAD-like 5,
RADIALIS-LIKE SANT/MYB 4		 0.71 0.3 -0.32
4 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE 0.71 0.33 -0.32
5 AT5G57130 Clp amino terminal domain-containing protein 0.7 0.33 -0.29
6 AT3G27400 Pectin lyase-like superfamily protein -0.69 0.34 -0.34
7 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 0.68 0.35 -0.3
8 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.68 0.3 -0.34
9 AT1G50030 target of rapamycin target of rapamycin 0.68 0.32 -0.32
10 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein -0.67 0.32 -0.33
11 AT1G59850 ARM repeat superfamily protein 0.67 0.32 -0.33
12 AT3G21380 Mannose-binding lectin superfamily protein 0.67 0.34 -0.3
13 AT3G26230 cytochrome P450, family 71, subfamily B, polypeptide 24 cytochrome P450, family 71,
subfamily B, polypeptide 24		 -0.67 0.32 -0.31
14 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.66 0.3 -0.33
15 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.66 0.3 -0.3
16 AT5G60140 AP2/B3-like transcriptional factor family protein -0.66 0.32 -0.31
17 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 -0.66 0.31 -0.31
18 AT3G05510 Phospholipid/glycerol acyltransferase family protein 0.66 0.3 -0.31
19 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 0.66 0.31 -0.34
20 AT5G40340 Tudor/PWWP/MBT superfamily protein 0.65 0.31 -0.31
21 AT1G76350 Plant regulator RWP-RK family protein 0.65 0.32 -0.33
22 AT2G15900 Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.65 0.32 -0.32
23 AT4G29940 pathogenesis related homeodomain protein A pathogenesis related homeodomain
protein A		 0.65 0.31 -0.32
24 AT5G38690 Zinc-finger domain of monoamine-oxidase A repressor R1
protein		 -0.65 0.33 -0.3
25 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.34 -0.32
26 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 0.64 0.32 -0.3
27 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 0.64 0.31 -0.33
28 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 -0.64 0.32 -0.33
29 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 -0.64 0.34 -0.31
30 AT5G41000 YELLOW STRIPE like 4 YELLOW STRIPE like 4 -0.64 0.31 -0.31
31 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 0.64 0.33 -0.31
32 AT1G79400 cation/H+ exchanger 2 cation/H+ exchanger 2, cation/H+
exchanger 2		 -0.64 0.31 -0.33
33 AT3G26320 cytochrome P450, family 71, subfamily B, polypeptide 36 cytochrome P450, family 71,
subfamily B, polypeptide 36		 -0.63 0.31 -0.31
34 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.63 0.31 -0.33
35 ATMG00580 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 0.63 0.3 -0.33
36 AT2G25680 molybdate transporter 1 molybdate transporter 1 -0.63 0.31 -0.33
37 AT2G29190 pumilio 2 pumilio 2, pumilio 2 0.63 0.3 -0.31
38 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.62 0.31 -0.31
39 AT5G62320 myb domain protein 99 myb domain protein 99, ATMYBCU15,
myb domain protein 99		 0.62 0.29 -0.34
40 AT1G60530 Dynamin related protein 4A Dynamin related protein 4A -0.62 0.3 -0.31
41 AT2G07360 SH3 domain-containing protein 0.62 0.3 -0.31
42 AT4G02690 Bax inhibitor-1 family protein 0.62 0.32 -0.34
43 AT3G05670 RING/U-box protein 0.62 0.34 -0.33
44 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1		 -0.62 0.3 -0.3
45 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.34
46 AT5G55780 Cysteine/Histidine-rich C1 domain family protein -0.61 0.31 -0.31
47 AT1G78460 SOUL heme-binding family protein -0.61 0.32 -0.33
48 AT1G30020 Protein of unknown function, DUF538 0.61 0.31 -0.32
49 AT4G23730 Galactose mutarotase-like superfamily protein -0.61 0.29 -0.33
50 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.61 0.32 -0.34
51 AT2G23230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.61 0.32 -0.32
52 AT4G25110 metacaspase 2 metacaspase 2, metacaspase 1c,
metacaspase 2, metacaspase 1c		 -0.61 0.33 -0.29
53 AT1G33680 KH domain-containing protein 0.6 0.35 -0.31
54 AT3G09910 RAB GTPase homolog C2B ATRAB18C, RAB GTPase homolog C2B,
RAB GTPase homolog C2B		 0.6 0.3 -0.3
55 AT4G10280 RmlC-like cupins superfamily protein -0.6 0.32 -0.32
56 AT5G59270 Concanavalin A-like lectin protein kinase family protein -0.6 0.33 -0.3
57 AT5G27830 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to oxidative stress; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Folate receptor, conserved region (InterPro:IPR018143); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.6 0.33 -0.31
58 AT1G03370 C2 calcium/lipid-binding and GRAM domain containing protein -0.6 0.31 -0.3
59 AT1G48170 unknown protein; Has 78 Blast hits to 78 proteins in 34
species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.3
60 AT2G42090 actin 9 actin 9 0.6 0.33 -0.32
61 AT2G39260 binding;RNA binding 0.6 0.34 -0.31
62 AT5G24710 Transducin/WD40 repeat-like superfamily protein 0.6 0.33 -0.32
63 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.32 -0.33
64 AT1G56350 Peptide chain release factor 2 -0.6 0.31 -0.31
65 AT1G70720 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.59 0.32 -0.29
66 AT4G19780 transposable element gene -0.59 0.31 -0.32
67 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.34 -0.33
68 AT1G02390 glycerol-3-phosphate acyltransferase 2 ARABIDOPSIS THALIANA
GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 2,
glycerol-3-phosphate
acyltransferase 2		 0.59 0.29 -0.31
69 AT5G60110 pumilio 18 pumilio 18, pumilio 18 0.59 0.31 -0.3
70 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 -0.59 0.33 -0.33
71 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 -0.58 0.3 -0.32
72 AT1G47470 Protein of unknown function (DUF784) -0.58 0.32 -0.31
73 AT3G11350 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.31 -0.31
74 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.58 0.32 -0.3
75 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 0.58 0.31 -0.31
76 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.31 -0.32
77 AT4G14610 pseudogene, disease resistance protein (CC-NBS-LRR class),
putative, domain signature CC-NBS-LRR exists, suggestive of
a disease resistance protein.; blastp match of 45% identity
and 2.2e-162 P-value to
GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type
disease resistance protein {Poncirus trifoliata}		 -0.58 0.3 -0.31
78 AT5G62580 ARM repeat superfamily protein 0.58 0.34 -0.3
79 AT1G13290 C2H2-like zinc finger protein DEFECTIVELY ORGANIZED TRIBUTARIES
5, WIP domain protein 6		 0.58 0.29 -0.32
80 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.58 0.3 -0.33
81 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 0.58 0.33 -0.29
82 AT3G29180 Protein of unknown function (DUF1336) 0.57 0.31 -0.33
83 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.57 0.3 -0.34
84 AT2G39640 glycosyl hydrolase family 17 protein 0.57 0.31 -0.31
85 AT5G01410 Aldolase-type TIM barrel family protein ATPDX1, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.3, PDX1,
PYRIDOXINE BIOSYNTHESIS 1.3,
REDUCED SUGAR RESPONSE 4		 -0.57 0.31 -0.31
86 AT1G54460 TPX2 (targeting protein for Xklp2) protein family -0.57 0.32 -0.32
87 AT5G59410 Rab5-interacting family protein -0.57 0.36 -0.29
88 AT2G30710 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.57 0.31 -0.31
89 AT1G73440 calmodulin-related -0.57 0.32 -0.31
90 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 -0.57 0.31 -0.32
91 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily -0.57 0.31 -0.32
92 AT2G21740 Protein of unknown function (DUF1278) 0.57 0.31 -0.33
93 AT3G18060 transducin family protein / WD-40 repeat family protein -0.57 0.33 -0.33
94 AT2G34580 CONTAINS InterPro DOMAIN/s: Herpesvirus UL139,
cytomegalovirus (InterPro:IPR021042); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.56 0.34 -0.32
95 AT2G43620 Chitinase family protein -0.56 0.32 -0.29
96 AT2G36440 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.33 -0.32
97 AT1G10340 Ankyrin repeat family protein -0.56 0.3 -0.31
98 AT3G50740 UDP-glucosyl transferase 72E1 UDP-glucosyl transferase 72E1 -0.56 0.31 -0.29
99 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.33
100 AT5G38130 HXXXD-type acyl-transferase family protein -0.55 0.31 -0.32
101 AT5G63520 CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like
(InterPro:IPR022364), FIST C domain (InterPro:IPR019494),
FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast
hits to 137 proteins in 56 species: Archae - 0; Bacteria -
88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.55 0.32 -0.3
102 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 -0.54 0.32 -0.33
103 AT1G19980 cytomatrix protein-related -0.54 0.3 -0.32
104 AT3G46280 protein kinase-related -0.54 0.3 -0.33
105 AT1G33990 methyl esterase 14 METHYL ESTERASE 14, methyl
esterase 14		 -0.54 0.31 -0.32
106 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.54 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0074 Cystine L-Cystine L-Cystine protein precursor 0.78 0.44 -0.45 C0074
108 C0082 Digalactosyldiacylglycerol-36:3 - Digalactosyldiacylglycerol-36:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.62 0.51 -0.52 C0082
109 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.62 0.34 -0.3