AT1G25540 : mediator 25
Query Information
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AGICode AT1G25540
Description phytochrome and flowering time regulatory protein (PFT1)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G25540 phytochrome and flowering time regulatory protein (PFT1) mediator 25, PHYTOCHROME AND
FLOWERING TIME 1		 1 0.3 -0.36
2 AT1G24620 EF hand calcium-binding protein family 0.71 0.31 -0.29
3 AT5G38820 Transmembrane amino acid transporter family protein 0.7 0.3 -0.33
4 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.64 0.33 -0.31
5 AT2G31130 unknown protein; Has 116 Blast hits to 113 proteins in 44
species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2;
Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source:
NCBI BLink).		 -0.64 0.29 -0.3
6 AT5G51800 Protein kinase superfamily protein -0.63 0.31 -0.32
7 AT4G33410 SIGNAL PEPTIDE PEPTIDASE-LIKE 1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1,
SIGNAL PEPTIDE PEPTIDASE-LIKE 1		 0.62 0.3 -0.31
8 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.3 -0.34
9 AT3G58890 RNI-like superfamily protein 0.6 0.32 -0.3
10 AT2G18610 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.32
11 AT1G67480 Galactose oxidase/kelch repeat superfamily protein 0.6 0.33 -0.32
12 AT2G44630 Galactose oxidase/kelch repeat superfamily protein 0.58 0.3 -0.32
13 AT3G24540 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 3, proline-rich
extensin-like receptor kinase 3		 0.58 0.3 -0.34
14 AT3G44080 F-box family protein -0.58 0.33 -0.31
15 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 -0.58 0.32 -0.34
16 AT4G21240 F-box and associated interaction domains-containing protein 0.57 0.29 -0.31
17 AT3G14480 glycine/proline-rich protein -0.57 0.29 -0.33
18 AT5G59740 UDP-N-acetylglucosamine (UAA) transporter family 0.57 0.33 -0.32
19 AT4G37630 cyclin d5;1 cyclin d5;1 0.57 0.33 -0.29
20 AT1G71692 AGAMOUS-like 12 AGAMOUS-like 12, XAANTAL1 0.57 0.32 -0.3
21 AT4G25560 myb domain protein 18 myb domain protein 18, LONG AFTER
FAR-RED LIGHT 1, myb domain
protein 18		 0.56 0.33 -0.31
22 AT4G36220 ferulic acid 5-hydroxylase 1 CYP84A1, ferulic acid
5-hydroxylase 1		 -0.56 0.32 -0.3
23 AT3G18215 Protein of unknown function, DUF599 0.56 0.33 -0.32
24 AT3G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.32 -0.32
25 AT4G15090 FRS (FAR1 Related Sequences) transcription factor family FAR-RED IMPAIRED RESPONSE 1 -0.56 0.33 -0.33
26 AT5G53470 acyl-CoA binding protein 1 ACYL-COA BINDING PROTEIN, acyl-CoA
binding protein 1		 -0.56 0.33 -0.33
27 AT4G39240 Galactose oxidase/kelch repeat superfamily protein 0.56 0.29 -0.31
28 AT2G43580 Chitinase family protein -0.55 0.3 -0.3
29 AT4G17610 tRNA/rRNA methyltransferase (SpoU) family protein 0.55 0.31 -0.3
30 AT4G30120 heavy metal atpase 3 A. THALIANA HEAVY METAL ATPASE 3,
heavy metal atpase 3		 -0.55 0.35 -0.3
31 AT4G10070 KH domain-containing protein 0.55 0.31 -0.32
32 AT5G34880 transposable element gene 0.55 0.32 -0.31
33 AT1G76180 Dehydrin family protein EARLY RESPONSE TO DEHYDRATION 14 -0.54 0.32 -0.31
34 AT2G45520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; Has
260 Blast hits to 238 proteins in 75 species: Archae - 0;
Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38;
Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).		 -0.54 0.33 -0.29
35 AT1G72350 MADS-box transcription factor family protein -0.54 0.33 -0.33
36 AT2G14540 serpin 2 ATSRP2, serpin 2 0.54 0.32 -0.31
37 AT2G16620 Protein kinase superfamily protein -0.54 0.34 -0.31
38 AT2G25600 Shaker pollen inward K+ channel AKT6, Shaker pollen inward K+
channel		 0.54 0.31 -0.32
39 AT5G59940 Cysteine/Histidine-rich C1 domain family protein 0.53 0.31 -0.29
40 AT3G07140 GPI transamidase component Gpi16 subunit family protein 0.53 0.32 -0.32
41 AT3G60850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; Has 42
Blast hits to 42 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.53 0.32 -0.31
42 AT4G17790 SNARE associated Golgi protein family 0.53 0.3 -0.3
43 AT3G29070 emp24/gp25L/p24 family/GOLD family protein 0.53 0.3 -0.32
44 AT2G16520 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: zinc
finger (C3HC4-type RING finger) family protein
(TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.31 -0.31
45 AT2G14160 RNA-binding (RRM/RBD/RNP motifs) family protein 0.53 0.31 -0.29
46 AT1G28630 unknown protein; Has 647 Blast hits to 524 proteins in 85
species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi -
44; Plants - 83; Viruses - 0; Other Eukaryotes - 414
(source: NCBI BLink).		 0.52 0.35 -0.34
47 AT2G24410 BEST Arabidopsis thaliana protein match is: SMAD/FHA
domain-containing protein (TAIR:AT3G20550.1); Has 194
Blast hits to 194 proteins in 92 species: Archae - 0;
Bacteria - 0; Metazoa - 118; Fungi - 33; Plants - 30;
Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).		 -0.52 0.32 -0.29
48 AT4G08220 transposable element gene 0.52 0.33 -0.31
49 AT5G48210 Protein of unknown function (DUF1278) -0.52 0.32 -0.3
50 AT1G48200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.52 0.35 -0.33
51 AT5G37160 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.52 0.3 -0.32
52 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.51 0.33 -0.31
53 AT3G23580 ribonucleotide reductase 2A RNR2, ribonucleotide reductase 2A -0.51 0.33 -0.31
54 AT2G24140 Protein of unknown function, DUF593 -0.51 0.33 -0.33
55 AT5G37490 ARM repeat superfamily protein -0.51 0.3 -0.32
56 AT2G30860 glutathione S-transferase PHI 9 ATGSTF7, glutathione S-transferase
PHI 9, GLUTTR, glutathione
S-transferase PHI 9		 -0.5 0.34 -0.31
57 AT1G80140 Pectin lyase-like superfamily protein 0.5 0.31 -0.31
58 AT3G02680 nijmegen breakage syndrome 1 ATNBS1, nijmegen breakage syndrome
1		 0.5 0.34 -0.34
59 AT4G29100 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.5 0.3 -0.31
60 AT2G24330 Protein of unknown function (DUF2296) -0.5 0.32 -0.32
61 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 -0.5 0.32 -0.31
62 AT5G66660 Protein of unknown function (DUF677) 0.5 0.32 -0.32
63 AT2G38840 Guanylate-binding family protein 0.49 0.31 -0.31
64 AT4G25160 U-box domain-containing protein kinase family protein 0.49 0.34 -0.33
65 AT3G51570 Disease resistance protein (TIR-NBS-LRR class) family 0.49 0.33 -0.33
66 AT3G13640 RNAse l inhibitor protein 1 ATP-binding cassette E1, RNAse l
inhibitor protein 1, RNAse l
inhibitor protein 1		 -0.49 0.31 -0.32
67 AT3G14460 LRR and NB-ARC domains-containing disease resistance
protein		 -0.49 0.32 -0.33
68 AT4G11745 Galactose oxidase/kelch repeat superfamily protein 0.49 0.31 -0.33
69 AT3G43110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, flower; EXPRESSED
DURING: 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G20790.1); Has 30 Blast hits to 30
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.49 0.33 -0.34
70 AT1G33817 transposable element gene 0.49 0.32 -0.34
71 AT1G61440 S-locus lectin protein kinase family protein -0.48 0.31 -0.3
72 AT1G23650 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.3 -0.31
73 AT5G22430 Pollen Ole e 1 allergen and extensin family protein 0.48 0.3 -0.31
74 AT2G02520 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.47 0.32 -0.34
75 AT2G19050 GDSL-like Lipase/Acylhydrolase superfamily protein 0.47 0.32 -0.34
76 AT3G21970 Domain of unknown function (DUF26) 0.47 0.29 -0.31
77 AT3G30620 transposable element gene 0.47 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0181 MST_2904.3 - - - 0.69 0.44 -0.45