AT1G16720 : high chlorophyll fluorescence phenotype 173
Query Information
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AGICode AT1G16720
Description high chlorophyll fluorescence phenotype 173
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G16720 high chlorophyll fluorescence phenotype 173 high chlorophyll fluorescence
phenotype 173		 1 0.32 -0.31
2 AT1G68010 hydroxypyruvate reductase ATHPR1, hydroxypyruvate reductase 0.91 0.31 -0.29
3 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.9 0.3 -0.31
4 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 peroxisomal NAD-malate
dehydrogenase 2		 0.9 0.33 -0.32
5 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 0.9 0.33 -0.32
6 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.89 0.31 -0.31
7 AT3G43540 Protein of unknown function (DUF1350) 0.88 0.32 -0.31
8 AT3G25690 Hydroxyproline-rich glycoprotein family protein Arabidopsis thaliana CHLOROPLAST
UNUSUAL POSITIONING 1, CHLOROPLAST
UNUSUAL POSITIONING 1		 0.88 0.31 -0.29
9 AT4G39710 FK506-binding protein 16-2 FK506-binding protein 16-2,
Photosynthetic NDH subcomplex L 4		 0.87 0.31 -0.3
10 AT1G14150 PsbQ-like 2 Photosynthetic NDH subcomplex L
2, PsbQ-like 1, PsbQ-like 2		 0.87 0.31 -0.32
11 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.86 0.34 -0.31
12 AT1G32520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 143 Blast hits to 142
proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa -
39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
48 (source: NCBI BLink).		 0.85 0.33 -0.36
13 AT3G21870 cyclin p2;1 cyclin p2;1 0.85 0.3 -0.33
14 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.85 0.3 -0.32
15 AT4G32570 TIFY domain protein 8 TIFY domain protein 8 0.85 0.33 -0.3
16 AT4G28080 Tetratricopeptide repeat (TPR)-like superfamily protein 0.85 0.3 -0.3
17 AT5G64460 Phosphoglycerate mutase family protein 0.84 0.34 -0.32
18 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.84 0.31 -0.3
19 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.84 0.3 -0.3
20 AT5G59750 DHBP synthase RibB-like alpha/beta domain;GTP
cyclohydrolase II		 0.84 0.34 -0.29
21 AT2G39470 PsbP-like protein 2 Photosynthetic NDH subcomplex L
1, PsbP-like protein 2		 0.84 0.32 -0.34
22 AT1G70760 inorganic carbon transport protein-related CHLORORESPIRATORY REDUCTION 23,
NADH dehydrogenase-like complex L		 0.84 0.33 -0.34
23 AT5G54290 cytochrome c biogenesis protein family CcdA 0.83 0.33 -0.3
24 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.83 0.31 -0.3
25 AT1G23310 glutamate:glyoxylate aminotransferase ALANINE-2-OXOGLUTARATE
AMINOTRANSFERASE 1,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 1,
glutamate:glyoxylate
aminotransferase		 0.83 0.34 -0.32
26 AT4G33010 glycine decarboxylase P-protein 1 glycine decarboxylase P-protein 1,
glycine decarboxylase P-protein 1		 0.83 0.33 -0.31
27 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.83 0.31 -0.33
28 AT1G12250 Pentapeptide repeat-containing protein 0.82 0.28 -0.33
29 AT2G23390 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase
(InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins
in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0;
Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes -
1088 (source: NCBI BLink).		 0.82 0.32 -0.31
30 AT3G10160 DHFS-FPGS homolog C A. THALIANA DHFS-FPGS HOMOLOG C,
DHFS-FPGS homolog C,
folylpolyglutamate synthetase 2		 0.82 0.33 -0.32
31 AT4G19985 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.82 0.32 -0.31
32 AT1G12860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 INDUCER OF CBF EXPRESSION 2,
SCREAM 2		 0.82 0.31 -0.3
33 AT4G26530 Aldolase superfamily protein 0.82 0.31 -0.32
34 AT5G48790 Domain of unknown function (DUF1995) 0.81 0.33 -0.31
35 AT1G60800 NSP-interacting kinase 3 NSP-interacting kinase 3 0.81 0.3 -0.33
36 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 0.81 0.31 -0.32
37 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.81 0.32 -0.32
38 AT5G17660 tRNA (guanine-N-7) methyltransferase 0.81 0.35 -0.31
39 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3		 0.81 0.34 -0.31
40 AT5G46390 Peptidase S41 family protein 0.81 0.32 -0.29
41 AT3G55630 DHFS-FPGS homolog D DHFS-FPGS homolog D, DHFS-FPGS
homolog D, folylpolyglutamate
synthetase 3		 0.8 0.3 -0.33
42 AT5G56850 unknown protein; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.8 0.3 -0.32
43 AT5G15310 myb domain protein 16 ATMIXTA, myb domain protein 16,
myb domain protein 16		 0.8 0.32 -0.29
44 AT2G40020 Nucleolar histone methyltransferase-related protein 0.8 0.32 -0.32
45 AT5G65685 UDP-Glycosyltransferase superfamily protein 0.79 0.32 -0.32
46 AT5G10470 kinesin like protein for actin based chloroplast movement 1 kinesin like protein for actin
based chloroplast movement 1,
KINESIN CDKA;1 ASSOCIATED 1		 0.79 0.32 -0.31
47 AT4G18240 starch synthase 4 ARABIDOPSIS THALIANA STARCH
SYNTHASE 4, starch synthase 4,
STARCH SYNTHASE 4		 0.79 0.32 -0.29
48 AT5G04810 pentatricopeptide (PPR) repeat-containing protein 0.79 0.33 -0.31
49 AT5G05600 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.77 0.33 -0.32
50 AT2G34930 disease resistance family protein / LRR family protein -0.77 0.31 -0.31
51 AT1G65820 microsomal glutathione s-transferase, putative -0.77 0.33 -0.31
52 AT4G21680 NITRATE TRANSPORTER 1.8 NITRATE TRANSPORTER 1.8 -0.76 0.29 -0.31
53 AT2G17570 Undecaprenyl pyrophosphate synthetase family protein -0.76 0.31 -0.32
54 AT3G11580 AP2/B3-like transcriptional factor family protein -0.75 0.31 -0.33
55 AT3G02360 6-phosphogluconate dehydrogenase family protein -0.75 0.31 -0.31
56 AT3G01930 Major facilitator superfamily protein -0.75 0.33 -0.33
57 AT3G19260 LAG1 homologue 2 LONGEVITY ASSURANCE GENE1 HOMOLOG
2, LAG1 homologue 2		 -0.75 0.3 -0.31
58 AT1G22360 UDP-glucosyl transferase 85A2 UDP-glucosyl transferase 85A2,
UDP-glucosyl transferase 85A2		 -0.75 0.32 -0.32
59 AT2G43780 unknown protein; Has 30 Blast hits to 30 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.31 -0.31
60 AT3G44720 arogenate dehydratase 4 arogenate dehydratase 4 -0.74 0.33 -0.31
61 AT1G09850 xylem bark cysteine peptidase 3 xylem bark cysteine peptidase 3 -0.74 0.31 -0.32
62 AT3G28450 Leucine-rich repeat protein kinase family protein -0.74 0.32 -0.3
63 AT4G27320 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS34, PHOS34 -0.74 0.33 -0.34
64 AT5G02580 Plant protein 1589 of unknown function -0.73 0.32 -0.32
65 AT2G38240 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.73 0.31 -0.33
66 AT3G56490 HIS triad family protein 3 HISTIDINE TRIAD NUCLEOTIDE-BINDING
1, HIS triad family protein 3		 -0.73 0.33 -0.31
67 AT5G16960 Zinc-binding dehydrogenase family protein -0.73 0.32 -0.32
68 AT1G35910 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
D		 -0.73 0.3 -0.33
69 AT1G54030 GDSL-like Lipase/Acylhydrolase superfamily protein GOLGI DEFECTS 36, MODIFIED VACUOLE
PHENOTYPE 1		 -0.73 0.31 -0.32
70 AT5G19550 aspartate aminotransferase 2 ASPARTATE AMINOTRANSFERASE 2,
aspartate aminotransferase 2		 -0.73 0.3 -0.32
71 AT3G51450 Calcium-dependent phosphotriesterase superfamily protein -0.73 0.31 -0.31
72 AT2G27690 cytochrome P450, family 94, subfamily C, polypeptide 1 cytochrome P450, family 94,
subfamily C, polypeptide 1		 -0.72 0.35 -0.31
73 AT1G14370 protein kinase 2A protein kinase 2A, kinase 1,
PBS1-like 2		 -0.72 0.32 -0.33
74 AT3G63310 Bax inhibitor-1 family protein BRZ-INSENSITIVE-LONG HYPOCOTYLS 4 -0.72 0.35 -0.32
75 AT1G06010 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.32
76 AT3G50260 cooperatively regulated by ethylene and jasmonate 1 ATERF#011, cooperatively regulated
by ethylene and jasmonate 1, DREB
AND EAR MOTIF PROTEIN 1		 -0.72 0.32 -0.33
77 AT4G24110 unknown protein; Has 76 Blast hits to 76 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.32
78 AT1G19180 jasmonate-zim-domain protein 1 jasmonate-zim-domain protein 1,
TIFY10A		 -0.72 0.31 -0.32
79 AT5G61010 exocyst subunit exo70 family protein E2 exocyst subunit exo70 family
protein E2, exocyst subunit exo70
family protein E2		 -0.71 0.31 -0.33
80 AT3G53600 C2H2-type zinc finger family protein -0.71 0.31 -0.3
81 AT5G16440 isopentenyl diphosphate isomerase 1 isopentenyl diphosphate isomerase
1		 -0.71 0.32 -0.31
82 AT4G35260 isocitrate dehydrogenase 1 isocitrate dehydrogenase I,
isocitrate dehydrogenase 1		 -0.71 0.31 -0.34
83 AT1G08030 tyrosylprotein sulfotransferase active quiescent center1,
tyrosylprotein sulfotransferase		 -0.71 0.33 -0.31
84 AT3G22630 20S proteasome beta subunit D1 20S proteasome beta subunit D1,
PRCGB		 -0.71 0.34 -0.31
85 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 -0.71 0.31 -0.31
86 AT3G54150 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.31 -0.3
87 AT5G35735 Auxin-responsive family protein -0.7 0.33 -0.32
88 AT3G23170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits
to 74 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.79 0.4 -0.42
90 C0192 Oxalic acid - Oxalate ascorbate degradation 0.79 0.41 -0.43 C0192