AT1G18600 : ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12
Query Information
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AGICode AT1G18600
Description RHOMBOID-like protein 12
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G18600 RHOMBOID-like protein 12 ARABIDOPSIS RHOMBOID-LIKE PROTEIN
12, RHOMBOID-like protein 12		 1 0.31 -0.3
2 AT3G08610 unknown protein; Has 40 Blast hits to 40 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.36 -0.32
3 AT3G12260 LYR family of Fe/S cluster biogenesis protein 0.77 0.29 -0.31
4 AT1G29040 unknown protein; LOCATED IN: chloroplast, vacuole;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Conserved
hypothetical protein CHP02058 (InterPro:IPR011719); Has 344
Blast hits to 344 proteins in 122 species: Archae - 2;
Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32;
Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).		 0.75 0.29 -0.29
5 AT5G67290 FAD-dependent oxidoreductase family protein 0.74 0.33 -0.32
6 AT1G60870 maternal effect embryo arrest 9 maternal effect embryo arrest 9 0.74 0.33 -0.31
7 AT2G42670 Protein of unknown function (DUF1637) 0.74 0.32 -0.32
8 AT3G06580 Mevalonate/galactokinase family protein GALACTOSE KINASE 1, GALK 0.74 0.32 -0.32
9 AT1G05430 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.34 -0.29
10 AT3G03070 NADH-ubiquinone oxidoreductase-related 0.73 0.3 -0.32
11 AT4G13950 ralf-like 31 ralf-like 31 0.73 0.32 -0.31
12 AT1G30910 Molybdenum cofactor sulfurase family protein 0.73 0.3 -0.33
13 AT5G08530 51 kDa subunit of complex I 51 kDa subunit of complex I 0.72 0.3 -0.31
14 AT3G60480 unknown protein; Has 17 Blast hits to 17 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.3 -0.32
15 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.33 -0.31
16 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.72 0.31 -0.3
17 AT5G13070 MSF1-like family protein 0.72 0.31 -0.32
18 AT3G46010 actin depolymerizing factor 1 actin depolymerizing factor 1,
atadf, ATADF1		 0.72 0.3 -0.29
19 AT4G30996 Protein of unknown function (DUF1068) NA(+)- AND K(+)-SENSITIVE 1 0.71 0.32 -0.29
20 AT3G56840 FAD-dependent oxidoreductase family protein 0.71 0.32 -0.31
21 AT3G55440 triosephosphate isomerase CYTOSOLIC TRIOSE PHOSPHATE
ISOMERASE, CYTOSOLIC ISOFORM
TRIOSE PHOSPHATE ISOMERASE,
triosephosphate isomerase		 0.71 0.32 -0.31
22 AT1G08490 chloroplastic NIFS-like cysteine desulfurase ATCPNIFS, ATNFS2, ATSUFS,
chloroplastic NIFS-like cysteine
desulfurase, SUFS		 0.71 0.33 -0.31
23 AT5G50870 ubiquitin-conjugating enzyme 27 ubiquitin-conjugating enzyme 27 0.71 0.33 -0.31
24 AT2G22590 UDP-Glycosyltransferase superfamily protein -0.71 0.32 -0.31
25 AT1G26160 Metal-dependent phosphohydrolase 0.71 0.32 -0.33
26 AT1G14730 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.71 0.3 -0.28
27 AT4G39150 DNAJ heat shock N-terminal domain-containing protein 0.71 0.32 -0.32
28 AT3G24160 putative type 1 membrane protein putative type 1 membrane protein 0.7 0.32 -0.3
29 AT3G10850 Metallo-hydrolase/oxidoreductase superfamily protein GLYOXALASE 2-2, GLY2 0.7 0.33 -0.32
30 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.32
31 AT5G59910 Histone superfamily protein HTB4 0.7 0.32 -0.32
32 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.7 0.31 -0.33
33 AT1G51540 Galactose oxidase/kelch repeat superfamily protein 0.7 0.32 -0.32
34 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 caffeoyl coenzyme A
O-methyltransferase 1		 0.7 0.34 -0.31
35 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 0.7 0.31 -0.3
36 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.7 0.32 -0.33
37 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.31 -0.32
38 AT1G79870 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 0.69 0.3 -0.31
39 AT5G40810 Cytochrome C1 family 0.69 0.31 -0.34
40 AT3G57870 sumo conjugation enzyme 1 AHUS5, SUMO CONJUGATION ENZYME 1,
EMBRYO DEFECTIVE 1637, sumo
conjugation enzyme 1, SUMO
CONJUGATING ENZYME 1A		 0.69 0.31 -0.31
41 AT5G53530 vacuolar protein sorting 26A vacuolar protein sorting 26A 0.69 0.29 -0.31
42 AT1G61780 postsynaptic protein-related 0.69 0.31 -0.32
43 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 0.69 0.33 -0.33
44 AT4G20150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, mitochondrial respiratory
chain complex I, respiratory chain complex I; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.68 0.31 -0.33
45 AT1G53650 CTC-interacting domain 8 CTC-interacting domain 8 0.68 0.32 -0.33
46 AT4G16450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: photorespiration; LOCATED IN: mitochondrion,
mitochondrial membrane, mitochondrial respiratory chain
complex I, respiratory chain complex I, membrane; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.68 0.3 -0.33
47 AT4G00895 ATPase, F1 complex, OSCP/delta subunit protein 0.68 0.31 -0.3
48 AT1G32260 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast
hits to 48 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.33
49 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.31 -0.3
50 AT4G12060 Double Clp-N motif protein 0.67 0.34 -0.3
51 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.67 0.3 -0.31
52 AT2G28060 5'-AMP-activated protein kinase beta-2 subunit protein 0.67 0.31 -0.31
53 AT5G41040 HXXXD-type acyl-transferase family protein -0.67 0.32 -0.33
54 AT2G45010 PLAC8 family protein 0.67 0.33 -0.32
55 AT1G04690 potassium channel beta subunit 1 potassium channel beta subunit 1,
KV-BETA1		 0.67 0.3 -0.32
56 AT5G55290 ATPase, V0 complex, subunit E 0.67 0.31 -0.34
57 AT1G77670 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.66 0.34 -0.31
58 AT2G22370 unknown protein; Has 127 Blast hits to 127 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.66 0.31 -0.31
59 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.66 0.3 -0.3
60 AT2G03200 Eukaryotic aspartyl protease family protein -0.66 0.34 -0.31
61 AT1G04290 Thioesterase superfamily protein 0.66 0.31 -0.3
62 AT2G25190 PPPDE putative thiol peptidase family protein 0.66 0.31 -0.31
63 AT2G42310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits
to 115 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.33 -0.31
64 AT3G51610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 NO PRIMEXINE AND PLASMA MEMBRANE
UNDULATION		 0.66 0.3 -0.29
65 AT5G04260 WCRKC thioredoxin 2 WCRKC thioredoxin 2 0.66 0.32 -0.31
66 AT1G15410 aspartate-glutamate racemase family 0.66 0.32 -0.3
67 AT5G53560 cytochrome B5 isoform E ATB5-A, ARABIDOPSIS CYTOCHROME B5
ISOFORM E, B5 #2, cytochrome B5
isoform E		 0.66 0.34 -0.33
68 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.33 -0.3
69 AT4G30760 Putative endonuclease or glycosyl hydrolase 0.65 0.31 -0.33
70 AT1G72170 Domain of unknown function (DUF543) 0.65 0.32 -0.32
71 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.65 0.31 -0.32
72 AT3G29630 UDP-Glycosyltransferase superfamily protein -0.65 0.31 -0.3
73 AT1G49450 Transducin/WD40 repeat-like superfamily protein -0.65 0.31 -0.3
74 AT1G10310 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.31 -0.34
75 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.65 0.31 -0.31
76 AT5G46860 Syntaxin/t-SNARE family protein ARABIDOPSIS THALIANA SYNTAXIN OF
PLANTS 22, ARABIDOPSIS THALIANA
VACUOLAR MORPHOLOGY 3, SHOOT
GRAVITROPISM 3, SYNTAXIN OF PLANTS
22, VACUOLAR MORPHOLOGY 3		 0.65 0.28 -0.32
77 AT3G01850 Aldolase-type TIM barrel family protein 0.65 0.33 -0.3
78 AT2G22090 RNA-binding (RRM/RBD/RNP motifs) family protein UBA1A 0.65 0.29 -0.31
79 AT5G37500 gated outwardly-rectifying K+ channel gated outwardly-rectifying K+
channel		 -0.64 0.33 -0.32
80 AT4G30970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.32 -0.29
81 AT5G47530 Auxin-responsive family protein -0.63 0.31 -0.32
82 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.31 -0.31
83 AT1G48130 1-cysteine peroxiredoxin 1 1-cysteine peroxiredoxin 1,
1-cysteine peroxiredoxin 1		 -0.62 0.3 -0.33
84 AT3G57010 Calcium-dependent phosphotriesterase superfamily protein -0.62 0.33 -0.3
85 AT5G09520 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.62 0.3 -0.32
86 AT4G36180 Leucine-rich receptor-like protein kinase family protein -0.62 0.33 -0.31
87 AT3G62730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
LP.02 two leaves visible, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits
to 172 proteins in 41 species: Archae - 0; Bacteria - 73;
Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.33
88 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.61 0.31 -0.31
89 AT2G31990 Exostosin family protein -0.61 0.3 -0.31
90 AT5G51680 hydroxyproline-rich glycoprotein family protein -0.6 0.3 -0.32
91 AT1G77180 chromatin protein family SKIP -0.6 0.32 -0.3
92 AT5G13580 ABC-2 type transporter family protein ATP-binding cassette G6 -0.6 0.3 -0.33
93 AT4G20910 double-stranded RNA binding protein-related / DsRBD
protein-related		 CORYMBOSA 2, HUA ENHANCER 1 -0.6 0.31 -0.31
94 AT4G23840 Leucine-rich repeat (LRR) family protein -0.6 0.33 -0.31
95 AT3G50400 GDSL-like Lipase/Acylhydrolase superfamily protein -0.6 0.29 -0.32
96 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.6 0.34 -0.31
97 AT5G23430 Transducin/WD40 repeat-like superfamily protein -0.59 0.33 -0.32
98 AT2G22510 hydroxyproline-rich glycoprotein family protein -0.58 0.29 -0.32
99 AT3G13175 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.3 -0.3
100 AT5G42690 Protein of unknown function, DUF547 -0.57 0.31 -0.31
101 AT3G24520 heat shock transcription factor C1 AT-HSFC1, heat shock transcription
factor C1		 -0.57 0.32 -0.3
102 AT2G23380 SET domain-containing protein CURLY LEAF, INCURVATA 1, SETDOMAIN
GROUP 1, SETDOMAIN 1		 -0.56 0.29 -0.34
103 AT1G73780 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.56 0.35 -0.31
104 AT3G27350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40700.1); Has 230 Blast
hits to 202 proteins in 35 species: Archae - 0; Bacteria -
3; Metazoa - 77; Fungi - 4; Plants - 130; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 -0.56 0.31 -0.3
105 AT4G01440 nodulin MtN21 /EamA-like transporter family protein -0.55 0.32 -0.34
106 AT2G48140 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 embryo sac development arrest 4 -0.55 0.31 -0.32
107 AT4G00970 cysteine-rich RLK (RECEPTOR-like protein kinase) 41 cysteine-rich RLK (RECEPTOR-like
protein kinase) 41		 -0.54 0.3 -0.32
108 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 -0.54 0.32 -0.31
109 AT4G32880 homeobox gene 8 homeobox gene 8, ATHB8, homeobox
gene 8		 -0.54 0.3 -0.31
110 AT1G53860 Remorin family protein -0.54 0.32 -0.3
111 AT3G18570 Oleosin family protein -0.54 0.33 -0.31
112 AT4G17280 Auxin-responsive family protein -0.54 0.3 -0.32
113 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW -0.53 0.29 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.77 0.43 -0.45 C0266