AT1G18630 : glycine-rich RNA-binding protein 6
Query Information
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AGICode AT1G18630
Description glycine-rich RNA-binding protein 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G18630 glycine-rich RNA-binding protein 6 glycine-rich RNA-binding protein 6 1 0.33 -0.33
2 AT4G39880 Ribosomal protein L23/L15e family protein 0.86 0.3 -0.32
3 AT5G05370 Cytochrome b-c1 complex, subunit 8 protein 0.85 0.31 -0.32
4 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 0.84 0.31 -0.32
5 AT3G10050 L-O-methylthreonine resistant 1 L-O-methylthreonine resistant 1 0.82 0.32 -0.29
6 AT2G20390 unknown protein; Has 50 Blast hits to 50 proteins in 18
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.33 -0.31
7 AT4G24920 secE/sec61-gamma protein transport protein 0.82 0.33 -0.29
8 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 0.82 0.32 -0.34
9 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.81 0.33 -0.31
10 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3		 0.8 0.32 -0.3
11 AT1G75460 ATP-dependent protease La (LON) domain protein -0.8 0.31 -0.31
12 AT3G09810 isocitrate dehydrogenase VI isocitrate dehydrogenase VI 0.8 0.35 -0.32
13 AT1G03860 prohibitin 2 prohibitin 2, prohibitin 2 0.8 0.33 -0.32
14 AT3G52390 TatD related DNase 0.79 0.31 -0.34
15 AT4G32530 ATPase, F0/V0 complex, subunit C protein 0.79 0.32 -0.32
16 AT2G27020 20S proteasome alpha subunit G1 20S proteasome alpha subunit G1 0.79 0.33 -0.32
17 AT5G64130 cAMP-regulated phosphoprotein 19-related protein 0.79 0.33 -0.3
18 AT4G29520 LOCATED IN: endoplasmic reticulum, plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Saposin B
(InterPro:IPR008139); Has 137 Blast hits to 137 proteins in
50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi -
10; Plants - 36; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 0.79 0.32 -0.31
19 AT2G34160 Alba DNA/RNA-binding protein 0.78 0.31 -0.33
20 AT1G67250 Proteasome maturation factor UMP1 0.78 0.29 -0.32
21 AT5G47320 ribosomal protein S19 ribosomal protein S19 0.78 0.32 -0.31
22 AT3G01280 voltage dependent anion channel 1 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 1, voltage
dependent anion channel 1		 0.78 0.32 -0.3
23 AT1G47640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2053, membrane
(InterPro:IPR019164); Has 204 Blast hits to 204 proteins in
84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi
- 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27
(source: NCBI BLink).		 0.78 0.33 -0.3
24 AT5G23540 Mov34/MPN/PAD-1 family protein 0.78 0.33 -0.32
25 AT1G74240 Mitochondrial substrate carrier family protein 0.78 0.32 -0.31
26 AT3G22630 20S proteasome beta subunit D1 20S proteasome beta subunit D1,
PRCGB		 0.78 0.33 -0.31
27 AT3G13930 Dihydrolipoamide acetyltransferase, long form protein 0.78 0.34 -0.32
28 AT4G37560 Acetamidase/Formamidase family protein -0.78 0.33 -0.34
29 AT1G29310 SecY protein transport family protein 0.78 0.3 -0.33
30 AT5G61790 calnexin 1 ATCNX1, calnexin 1 0.77 0.32 -0.31
31 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA 0.77 0.32 -0.31
32 AT3G17910 Surfeit locus 1 cytochrome c oxidase biogenesis protein EMBRYO DEFECTIVE 3121, SURFEIT 1 0.77 0.3 -0.32
33 AT3G18760 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.77 0.32 -0.31
34 AT1G27970 nuclear transport factor 2B nuclear transport factor 2B 0.77 0.31 -0.31
35 AT2G18030 Peptide methionine sulfoxide reductase family protein 0.77 0.31 -0.31
36 AT2G20760 Clathrin light chain protein 0.77 0.31 -0.31
37 AT5G08300 Succinyl-CoA ligase, alpha subunit 0.77 0.3 -0.32
38 AT5G27395 Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein		 0.77 0.32 -0.31
39 AT3G16520 UDP-glucosyl transferase 88A1 UDP-glucosyl transferase 88A1 -0.76 0.31 -0.33
40 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.76 0.31 -0.3
41 AT2G29530 Tim10/DDP family zinc finger protein TIM10 0.75 0.32 -0.3
42 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b 0.75 0.32 -0.32
43 AT1G30630 Coatomer epsilon subunit 0.75 0.31 -0.34
44 AT4G37550 Acetamidase/Formamidase family protein -0.75 0.34 -0.31
45 AT3G47930 L-galactono-1,4-lactone dehydrogenase L-galactono-1,4-lactone
dehydrogenase,
L-galactono-1,4-lactone
dehydrogenase		 0.75 0.32 -0.32
46 AT3G20000 translocase of the outer mitochondrial membrane 40 translocase of the outer
mitochondrial membrane 40		 0.75 0.32 -0.33
47 AT5G03610 GDSL-like Lipase/Acylhydrolase superfamily protein 0.75 0.31 -0.34
48 AT2G01190 Octicosapeptide/Phox/Bem1p family protein PIGMENT DEFECTIVE 331 0.75 0.33 -0.32
49 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.75 0.31 -0.31
50 AT5G61240 Leucine-rich repeat (LRR) family protein 0.75 0.33 -0.32
51 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 0.75 0.32 -0.32
52 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 -0.75 0.32 -0.31
53 AT3G60820 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBF1 0.75 0.31 -0.3
54 AT5G43170 zinc-finger protein 3 zinc-finger protein 3, zinc-finger
protein 3		 0.74 0.32 -0.32
55 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1		 0.74 0.3 -0.33
56 AT5G01520 RING/U-box superfamily protein ABA Insensitive RING Protein 2,
AtAIRP2		 -0.74 0.33 -0.33
57 AT1G79460 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 ARABIDOPSIS THALIANA ENT-KAURENE
SYNTHASE, ARABIDOPSIS THALIANA
ENT-KAURENE SYNTHASE 1, GA
REQUIRING 2, KS, ENT-KAURENE
SYNTHASE 1		 -0.74 0.31 -0.34
58 AT5G57490 voltage dependent anion channel 4 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 4, voltage
dependent anion channel 4		 0.74 0.3 -0.3
59 AT5G40660 ATP12 protein-related 0.74 0.34 -0.3
60 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.31 -0.31
61 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 -0.74 0.31 -0.3
62 AT1G18500 methylthioalkylmalate synthase-like 4 ISOPROPYLMALATE SYNTHASE 1,
methylthioalkylmalate
synthase-like 4		 0.74 0.31 -0.3
63 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 0.74 0.29 -0.32
64 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 0.73 0.31 -0.31
65 AT1G28210 DNAJ heat shock family protein ATJ1 0.73 0.32 -0.3
66 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10		 0.73 0.31 -0.32
67 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 0.73 0.27 -0.31
68 AT5G64300 GTP cyclohydrolase II ARABIDOPSIS THALIANA GTP
CYCLOHYDROLASE II, Arabidopsis
thaliana riboflavin A1, GTP
cyclohydrolase II, RED FLUORESCENT
IN DARKNESS 1, riboflavin A1		 0.72 0.32 -0.32
69 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 0.72 0.32 -0.33
70 AT4G21850 methionine sulfoxide reductase B9 methionine sulfoxide reductase B9,
methionine sulfoxide reductase B9		 0.72 0.35 -0.33
71 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.29 -0.32
72 AT5G54780 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.72 0.32 -0.33
73 AT4G02030 Vps51/Vps67 family (components of vesicular transport)
protein		 0.72 0.32 -0.31
74 AT5G15880 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.72 0.34 -0.31
75 AT1G68220 Protein of unknown function (DUF1218) -0.72 0.32 -0.3
76 AT4G24330 Protein of unknown function (DUF1682) 0.72 0.29 -0.32
77 AT4G38630 regulatory particle non-ATPase 10 ATMCB1, MULTIUBIQUITIN CHAIN
BINDING PROTEIN 1,
MULTIUBIQUITIN-CHAIN-BINDING
PROTEIN 1, regulatory particle
non-ATPase 10		 0.72 0.32 -0.33
78 AT2G37550 ARF-GAP domain 7 ARF-GAP domain 7, yeast pde1
suppressor 1		 0.71 0.34 -0.33
79 AT1G59620 Disease resistance protein (CC-NBS-LRR class) family CW9 -0.71 0.32 -0.32
80 AT4G12590 Protein of unknown function DUF106, transmembrane 0.71 0.31 -0.29
81 AT4G26690 PLC-like phosphodiesterase family protein Glycerophosphodiester
phosphodiesterase (GDPD) like 3,
GLYCEROPHOSPHODIESTERASE-LIKE 2,
MUTANT ROOT HAIR 5, SHAVEN 3		 0.71 0.32 -0.34
82 AT3G60450 Phosphoglycerate mutase family protein 0.71 0.33 -0.33
83 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.71 0.34 -0.31
84 AT3G25670 Leucine-rich repeat (LRR) family protein -0.7 0.3 -0.31
85 AT3G18490 Eukaryotic aspartyl protease family protein -0.69 0.32 -0.32
86 AT1G53160 squamosa promoter binding protein-like 4 squamosa promoter binding
protein-like 4		 -0.69 0.33 -0.32
87 AT2G45600 alpha/beta-Hydrolases superfamily protein -0.69 0.29 -0.32
88 AT1G01250 Integrase-type DNA-binding superfamily protein -0.69 0.29 -0.31
89 AT4G23870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.3 -0.33
90 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.68 0.32 -0.3
91 AT4G21650 Subtilase family protein -0.67 0.32 -0.31
92 AT1G18810 phytochrome kinase substrate-related -0.67 0.32 -0.32
93 AT5G03190 conserved peptide upstream open reading frame 47 conserved peptide upstream open
reading frame 47		 -0.67 0.31 -0.33
94 AT3G56080 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.31 -0.32
95 AT1G64380 Integrase-type DNA-binding superfamily protein -0.67 0.3 -0.32
96 AT1G56220 Dormancy/auxin associated family protein -0.67 0.31 -0.32
97 AT2G06410 transposable element gene -0.67 0.32 -0.32
98 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 -0.66 0.31 -0.32
99 AT1G29240 Protein of unknown function (DUF688) -0.65 0.33 -0.31
100 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 -0.65 0.32 -0.31
101 AT4G30110 heavy metal atpase 2 ARABIDOPSIS HEAVY METAL ATPASE 2,
heavy metal atpase 2		 -0.65 0.32 -0.29
102 AT5G25610 BURP domain-containing protein ATRD22, RESPONSIVE TO DESSICATION
22		 -0.65 0.31 -0.32
103 AT5G03180 RING/U-box superfamily protein -0.64 0.31 -0.31
104 AT5G25470 AP2/B3-like transcriptional factor family protein -0.64 0.3 -0.33
105 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.33
106 AT5G40420 oleosin 2 OLEOSIN 2, oleosin 2 -0.62 0.31 -0.33
107 AT3G26300 cytochrome P450, family 71, subfamily B, polypeptide 34 cytochrome P450, family 71,
subfamily B, polypeptide 34		 -0.62 0.31 -0.32
108 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 -0.62 0.32 -0.33
109 AT1G22640 myb domain protein 3 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 3, myb domain protein 3		 -0.62 0.3 -0.31
110 AT3G46580 methyl-CPG-binding domain protein 5 ATMBD5, METHYL-CPG-BINDING DOMAIN
PROTEIN 05, methyl-CPG-binding
domain protein 5		 -0.61 0.32 -0.31
111 AT2G07180 Protein kinase superfamily protein -0.61 0.31 -0.3
112 AT4G27530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G53895.1); Has 14 Blast hits
to 14 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.31
113 AT5G59430 telomeric repeat binding protein 1 TELOMERE REPEAT BINDING PROTEIN 1,
telomeric repeat binding protein 1		 -0.6 0.31 -0.32
114 AT1G10210 mitogen-activated protein kinase 1 mitogen-activated protein kinase
1, mitogen-activated protein
kinase 1		 -0.6 0.31 -0.31
115 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.31
116 AT2G31290 Ubiquitin carboxyl-terminal hydrolase family protein -0.6 0.32 -0.32
117 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 -0.6 0.33 -0.32
118 AT1G73680 alpha dioxygenase alpha dioxygenase -0.6 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
119 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		-0.84 0.45 -0.42 C0263
120 C0143 Maltitol - - starch degradation II -0.68 0.44 -0.46
121 C0132 Kaempferol-3-O-rutinoside - - - -0.67 0.43 -0.47