AT4G10300 : -
Query Information
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AGICode AT4G10300
Description RmlC-like cupins superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G10300 RmlC-like cupins superfamily protein 1 0.32 -0.31
2 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.92 0.33 -0.3
3 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.92 0.32 -0.31
4 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR
region		 protein containing PDZ domain, a
K-box domain, and a TPR region		 0.91 0.33 -0.33
5 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.91 0.3 -0.33
6 AT1G14270 CAAX amino terminal protease family protein 0.91 0.32 -0.32
7 AT1G76450 Photosystem II reaction center PsbP family protein 0.9 0.29 -0.32
8 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.9 0.32 -0.31
9 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.9 0.34 -0.34
10 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.89 0.31 -0.3
11 AT3G29185 Domain of unknown function (DUF3598) 0.89 0.32 -0.3
12 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.89 0.29 -0.34
13 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast PIGMENT DEFECTIVE 334 0.89 0.31 -0.29
14 AT5G52440 Bacterial sec-independent translocation protein mttA/Hcf106 HIGH CHLOROPHYLL FLUORESCENCE 106 0.89 0.29 -0.31
15 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.89 0.31 -0.34
16 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.89 0.33 -0.3
17 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.89 0.32 -0.3
18 AT5G17230 PHYTOENE SYNTHASE PHYTOENE SYNTHASE 0.89 0.32 -0.32
19 AT4G18370 DEGP protease 5 DEGP protease 5, DEGP PROTEASE 5,
PROTEASE HHOA PRECUSOR		 0.88 0.31 -0.31
20 AT4G27600 pfkB-like carbohydrate kinase family protein GENES NECESSARY FOR THE
ACHIEVEMENT OF RUBISCO
ACCUMULATION 5		 0.88 0.34 -0.35
21 AT1G26220 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.88 0.31 -0.31
22 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 0.88 0.34 -0.32
23 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.88 0.32 -0.33
24 AT4G38490 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.88 0.31 -0.31
25 AT3G07670 Rubisco methyltransferase family protein 0.88 0.34 -0.31
26 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.32 -0.31
27 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.88 0.31 -0.31
28 AT3G12780 phosphoglycerate kinase 1 phosphoglycerate kinase 1 0.88 0.33 -0.33
29 AT4G16410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF751 (InterPro:IPR008470); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.88 0.31 -0.31
30 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.88 0.32 -0.33
31 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.32 -0.33
32 AT5G51545 low psii accumulation2 low psii accumulation2 0.88 0.32 -0.32
33 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.87 0.31 -0.31
34 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.87 0.32 -0.31
35 AT1G56190 Phosphoglycerate kinase family protein 0.87 0.28 -0.32
36 AT1G44575 Chlorophyll A-B binding family protein CP22, NONPHOTOCHEMICAL QUENCHING
4, PHOTOSYSTEM II SUBUNIT S		 0.87 0.31 -0.32
37 AT2G32500 Stress responsive alpha-beta barrel domain protein 0.87 0.31 -0.34
38 AT3G01660 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.87 0.3 -0.33
39 AT2G29360 NAD(P)-binding Rossmann-fold superfamily protein 0.87 0.31 -0.32
40 AT1G45474 photosystem I light harvesting complex gene 5 photosystem I light harvesting
complex gene 5		 0.87 0.31 -0.3
41 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.87 0.31 -0.32
42 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.32 -0.29
43 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.86 0.33 -0.3
44 AT3G19480 D-3-phosphoglycerate dehydrogenase 0.86 0.33 -0.35
45 AT5G01530 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.86 0.3 -0.31
46 AT1G32550 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 1 0.86 0.3 -0.31
47 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.86 0.31 -0.33
48 AT2G20260 photosystem I subunit E-2 photosystem I subunit E-2 0.86 0.32 -0.31
49 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.86 0.33 -0.31
50 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase 0.86 0.31 -0.31
51 AT4G25910 NFU domain protein 3 ATCNFU3, NFU domain protein 3 0.86 0.34 -0.31
52 AT5G46420 16S rRNA processing protein RimM family 0.86 0.31 -0.33
53 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.85 0.32 -0.31
54 AT4G09620 Mitochondrial transcription termination factor family
protein		 0.85 0.31 -0.32
55 AT2G32765 small ubiquitinrelated modifier 5 ATSUMO5, SUMO 5, small
ubiquitinrelated modifier 5		 0.85 0.32 -0.32
56 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.85 0.29 -0.3
57 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.85 0.33 -0.32
58 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.84 0.33 -0.31
59 AT1G43670 Inositol monophosphatase family protein Arabidopsis thaliana cytosolic
fructose-1,6-bisphosphatase,
fructose-1,6-bisphosphatase,
FRUCTOSE INSENSITIVE 1		 0.84 0.29 -0.31
60 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.84 0.33 -0.3
61 AT1G74730 Protein of unknown function (DUF1118) 0.84 0.3 -0.3
62 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.84 0.29 -0.3
63 AT3G32930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.84 0.32 -0.34
64 AT1G21350 Thioredoxin superfamily protein 0.84 0.33 -0.31
65 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.84 0.31 -0.32
66 AT5G07020 proline-rich family protein 0.84 0.34 -0.31
67 AT1G79040 photosystem II subunit R photosystem II subunit R 0.84 0.33 -0.3
68 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.84 0.33 -0.31
69 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.84 0.31 -0.31
70 AT4G12800 photosystem I subunit l photosystem I subunit l 0.84 0.32 -0.32
71 AT4G39270 Leucine-rich repeat protein kinase family protein -0.79 0.3 -0.33
72 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 -0.75 0.3 -0.33
73 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.74 0.32 -0.32
74 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.74 0.33 -0.34
75 AT2G39110 Protein kinase superfamily protein -0.74 0.33 -0.3
76 AT5G12290 dgd1 suppressor 1 DGD1 SUPPRESSOR 1 -0.73 0.32 -0.31
77 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.73 0.3 -0.3
78 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.73 0.32 -0.34
79 AT5G63930 Leucine-rich repeat protein kinase family protein -0.73 0.33 -0.33
80 AT4G29690 Alkaline-phosphatase-like family protein -0.72 0.32 -0.31
81 AT5G51500 Plant invertase/pectin methylesterase inhibitor superfamily -0.71 0.3 -0.34
82 AT3G29310 calmodulin-binding protein-related -0.71 0.3 -0.32
83 AT5G13010 RNA helicase family protein embryo defective 3011 -0.7 0.29 -0.29
84 AT5G24600 Protein of unknown function, DUF599 -0.7 0.28 -0.33
85 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.69 0.32 -0.34
86 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 -0.69 0.29 -0.31
87 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.69 0.34 -0.31
88 AT5G03240 polyubiquitin 3 polyubiquitin 3 -0.67 0.32 -0.32
89 AT3G21770 Peroxidase superfamily protein -0.67 0.33 -0.3
90 AT3G26440 Protein of unknown function (DUF707) -0.67 0.29 -0.33
91 AT3G15300 VQ motif-containing protein -0.66 0.32 -0.3
92 AT2G25520 Drug/metabolite transporter superfamily protein -0.65 0.33 -0.31
93 AT5G01830 ARM repeat superfamily protein -0.65 0.34 -0.31
94 AT1G52950 Nucleic acid-binding, OB-fold-like protein -0.64 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.81 0.52 -0.51 C0241
96 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		-0.73 0.45 -0.45 C0227