AGICode | AT2G33540 |
Description | C-terminal domain phosphatase-like 3 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G33540 | C-terminal domain phosphatase-like 3 | ATCPL3, C-terminal domain phosphatase-like 3 |
1 | 0.33 | -0.33 | ||
2 | AT5G63320 | nuclear protein X1 | nuclear protein X1 | 0.68 | 0.29 | -0.31 | ||
3 | AT1G55325 | RNA polymerase II transcription mediators | GRAND CENTRAL, MACCHI-BOU 2 | 0.64 | 0.31 | -0.32 | ||
4 | AT3G50590 | Transducin/WD40 repeat-like superfamily protein | 0.63 | 0.31 | -0.31 | |||
5 | AT2G03190 | SKP1-like 16 | SKP1-like 16, SKP1-like 16 | 0.63 | 0.31 | -0.31 | ||
6 | AT3G20030 | F-box and associated interaction domains-containing protein | -0.63 | 0.33 | -0.29 | |||
7 | AT1G35790 | transposable element gene | 0.62 | 0.32 | -0.31 | |||
8 | AT2G40790 | C-terminal cysteine residue is changed to a serine 2 | C-terminal cysteine residue is changed to a serine 2, C-terminal cysteine residue is changed to a serine 2 |
-0.61 | 0.31 | -0.32 | ||
9 | AT1G17070 | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain |
0.61 | 0.3 | -0.33 | |||
10 | AT4G20400 | JUMONJI 14 | JUMONJI 14, PKDM7B | 0.61 | 0.31 | -0.31 | ||
11 | AT5G18475 | Pentatricopeptide repeat (PPR) superfamily protein | 0.6 | 0.32 | -0.31 | |||
12 | AT5G06250 | AP2/B3-like transcriptional factor family protein | 0.6 | 0.33 | -0.33 | |||
13 | AT5G61600 | ethylene response factor 104 | ethylene response factor 104 | -0.59 | 0.29 | -0.31 | ||
14 | AT5G51190 | Integrase-type DNA-binding superfamily protein | -0.58 | 0.31 | -0.32 | |||
15 | AT1G22460 | O-fucosyltransferase family protein | -0.58 | 0.32 | -0.32 | |||
16 | AT2G03630 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). |
-0.58 | 0.3 | -0.34 | |||
17 | AT2G39950 | unknown protein; Has 978 Blast hits to 254 proteins in 81 species: Archae - 0; Bacteria - 8; Metazoa - 109; Fungi - 53; Plants - 41; Viruses - 0; Other Eukaryotes - 767 (source: NCBI BLink). |
0.57 | 0.32 | -0.32 | |||
18 | AT5G46660 | protein kinase C-like zinc finger protein | 0.57 | 0.33 | -0.33 | |||
19 | AT2G43840 | UDP-glycosyltransferase 74 F1 | UDP-glycosyltransferase 74 F1 | 0.57 | 0.31 | -0.31 | ||
20 | AT3G06940 | transposable element gene | 0.56 | 0.3 | -0.32 | |||
21 | AT5G59640 | transposable element gene | 0.56 | 0.31 | -0.33 | |||
22 | AT5G56620 | NAC domain containing protein 99 | NAC domain containing protein 99, NAC domain containing protein 99 |
-0.56 | 0.33 | -0.33 | ||
23 | AT3G04750 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.55 | 0.32 | -0.33 | |||
24 | AT1G57650 | ATP binding | 0.55 | 0.33 | -0.32 | |||
25 | AT5G40750 | FBD / Leucine Rich Repeat domains containing protein | 0.55 | 0.31 | -0.31 | |||
26 | AT5G43340 | phosphate transporter 1;6 | phosphate transporter 1;6, PHOSPHATE TRANSPORTER 6 |
0.55 | 0.33 | -0.32 | ||
27 | AT1G75600 | Histone superfamily protein | -0.55 | 0.32 | -0.32 | |||
28 | AT1G06270 | Pentatricopeptide repeat (PPR) superfamily protein | 0.55 | 0.3 | -0.32 | |||
29 | AT4G24570 | dicarboxylate carrier 2 | dicarboxylate carrier 2 | -0.55 | 0.31 | -0.31 | ||
30 | AT2G06010 | OBP3-responsive gene 4 | OBP3-responsive gene 4 | -0.55 | 0.32 | -0.3 | ||
31 | AT1G63500 | Protein kinase protein with tetratricopeptide repeat domain | 0.55 | 0.32 | -0.33 | |||
32 | AT1G61340 | F-box family protein | -0.54 | 0.31 | -0.33 | |||
33 | AT4G24980 | nodulin MtN21 /EamA-like transporter family protein | 0.54 | 0.32 | -0.32 | |||
34 | AT2G23540 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.54 | 0.32 | -0.32 | |||
35 | AT2G40000 | ortholog of sugar beet HS1 PRO-1 2 | ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, ortholog of sugar beet HS1 PRO-1 2 |
-0.54 | 0.32 | -0.31 | ||
36 | AT3G46620 | zinc finger (C3HC4-type RING finger) family protein | -0.54 | 0.3 | -0.31 | |||
37 | AT1G22810 | Integrase-type DNA-binding superfamily protein | -0.54 | 0.32 | -0.3 | |||
38 | AT3G15250 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits to 218 proteins in 63 species: Archae - 0; Bacteria - 22; Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). |
-0.54 | 0.31 | -0.31 | |||
39 | AT3G12850 | COP9 signalosome complex-related / CSN complex-related | 0.54 | 0.32 | -0.32 | |||
40 | AT2G33170 | Leucine-rich repeat receptor-like protein kinase family protein |
0.54 | 0.32 | -0.33 | |||
41 | AT5G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.53 | 0.32 | -0.35 | |||
42 | AT3G24360 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
-0.53 | 0.33 | -0.32 | |||
43 | AT3G45110 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.31 | -0.34 | |||
44 | AT4G27280 | Calcium-binding EF-hand family protein | -0.53 | 0.33 | -0.29 | |||
45 | AT4G34430 | DNA-binding family protein | SWITCH/SUCROSE NONFERMENTING 3D, CHB3 |
0.53 | 0.31 | -0.29 | ||
46 | AT4G25470 | C-repeat/DRE binding factor 2 | ATCBF2, C-repeat/DRE binding factor 2, DRE/CRT-BINDING PROTEIN 1C, FREEZING TOLERANCE QTL 4 |
-0.53 | 0.33 | -0.32 | ||
47 | AT2G29250 | Concanavalin A-like lectin protein kinase family protein | -0.53 | 0.31 | -0.31 | |||
48 | AT2G35380 | Peroxidase superfamily protein | -0.53 | 0.33 | -0.3 | |||
49 | AT3G48830 | polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein |
0.52 | 0.33 | -0.32 | |||
50 | AT5G02730 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
0.52 | 0.33 | -0.31 | |||
51 | AT4G20800 | FAD-binding Berberine family protein | 0.52 | 0.3 | -0.31 | |||
52 | AT3G04370 | plasmodesmata-located protein 4 | plasmodesmata-located protein 4 | -0.52 | 0.32 | -0.31 | ||
53 | AT4G27652 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27657.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.52 | 0.29 | -0.32 | |||
54 | AT1G10620 | Protein kinase superfamily protein | proline-rich extensin-like receptor kinase 11, proline-rich extensin-like receptor kinase 11 |
0.52 | 0.32 | -0.3 | ||
55 | AT1G18740 | Protein of unknown function (DUF793) | -0.52 | 0.33 | -0.3 | |||
56 | AT5G45260 | Disease resistance protein (TIR-NBS-LRR class) | ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52, RESISTANT TO RALSTONIA SOLANACEARUM 1, SENSITIVE TO LOW HUMIDITY 1 |
0.51 | 0.29 | -0.31 | ||
57 | AT4G36870 | BEL1-like homeodomain 2 | BEL1-like homeodomain 2, SAWTOOTH 1 |
0.51 | 0.31 | -0.32 | ||
58 | AT2G03740 | late embryogenesis abundant domain-containing protein / LEA domain-containing protein |
0.51 | 0.3 | -0.31 | |||
59 | AT5G66340 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.51 | 0.32 | -0.29 | |||
60 | AT1G67880 | beta-1,4-N-acetylglucosaminyltransferase family protein | -0.5 | 0.33 | -0.3 | |||
61 | AT5G47580 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
ALTERED SEED GERMINATION 7 | 0.5 | 0.32 | -0.31 | ||
62 | AT3G01190 | Peroxidase superfamily protein | -0.5 | 0.33 | -0.32 | |||
63 | AT1G06020 | pfkB-like carbohydrate kinase family protein | 0.5 | 0.32 | -0.31 | |||
64 | AT4G07425 | transposable element gene | 0.5 | 0.32 | -0.31 | |||
65 | AT4G38080 | hydroxyproline-rich glycoprotein family protein | -0.49 | 0.3 | -0.29 | |||
66 | AT1G31400 | TRAF-like family protein | 0.49 | 0.32 | -0.33 | |||
67 | AT3G58290 | TRAF-like superfamily protein | -0.49 | 0.32 | -0.29 | |||
68 | AT4G29780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
-0.49 | 0.32 | -0.3 | |||
69 | AT5G47230 | ethylene responsive element binding factor 5 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, ethylene responsive element binding factor 5 |
-0.48 | 0.31 | -0.32 | ||
70 | AT1G52260 | PDI-like 1-5 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5, PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5 |
-0.47 | 0.3 | -0.31 | ||
71 | AT5G48710 | Ubiquitin-like superfamily protein | -0.46 | 0.3 | -0.31 | |||
72 | AT5G40090 | Disease resistance protein (TIR-NBS class) | -0.46 | 0.31 | -0.32 | |||
73 | AT5G36960 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.45 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
74 | C0096 | Gluconic acid | - | D-Gluconate | - | 0.62 | 0.45 | -0.44 | ||
75 | C0020 | 1-Aminocyclopropane-1-carboxylic acid | - | 1-Aminocyclopropane-1-carboxylate | jasmonoyl-amino acid conjugates biosynthesis I, ethylene biosynthesis I (plants), methionine salvage pathway |
0.5 | 0.45 | -0.45 |