AT1G17890 : GER2
Query Information
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AGICode AT1G17890
Description NAD(P)-binding Rossmann-fold superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 1 0.31 -0.31
2 AT4G00300 fringe-related protein 0.8 0.29 -0.33
3 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.78 0.3 -0.32
4 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 0.78 0.31 -0.34
5 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.77 0.29 -0.31
6 AT2G35310 Transcriptional factor B3 family protein -0.77 0.33 -0.32
7 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.77 0.3 -0.31
8 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.76 0.3 -0.32
9 AT1G30000 alpha-mannosidase 3 alpha-mannosidase 3 0.76 0.3 -0.34
10 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.31 -0.31
11 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.76 0.34 -0.32
12 AT5G62740 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 ATHIR1, AtHIR4,
HYPERSENSITIVE-INDUCED RESPONSE
PROTEIN 1, hypersensitive induced
reaction 4		 0.75 0.31 -0.34
13 AT4G26210 Mitochondrial ATP synthase subunit G protein 0.75 0.3 -0.32
14 AT4G19410 Pectinacetylesterase family protein 0.74 0.31 -0.31
15 AT2G36320 A20/AN1-like zinc finger family protein 0.73 0.3 -0.32
16 AT4G01700 Chitinase family protein 0.73 0.3 -0.29
17 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 0.73 0.32 -0.33
18 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C		 0.73 0.31 -0.29
19 AT2G35910 RING/U-box superfamily protein 0.73 0.33 -0.33
20 AT3G54120 Reticulon family protein 0.73 0.32 -0.33
21 AT3G07470 Protein of unknown function, DUF538 0.72 0.3 -0.32
22 AT1G30890 Integral membrane HRF1 family protein 0.72 0.32 -0.34
23 AT5G52280 Myosin heavy chain-related protein -0.72 0.31 -0.3
24 AT1G51540 Galactose oxidase/kelch repeat superfamily protein 0.72 0.31 -0.3
25 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.72 0.31 -0.31
26 AT5G51350 Leucine-rich repeat transmembrane protein kinase family
protein		 MORE LATERAL GROWTH1 -0.72 0.3 -0.32
27 AT1G05270 TraB family protein 0.72 0.32 -0.31
28 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 0.71 0.32 -0.32
29 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.29 -0.3
30 AT4G39220 Rer1 family protein ATRER1A 0.71 0.33 -0.32
31 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.71 0.32 -0.31
32 AT3G05490 ralf-like 22 ralf-like 22 0.71 0.34 -0.34
33 AT1G26960 homeobox protein 23 homeobox protein 23, homeobox
protein 23		 0.71 0.33 -0.3
34 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 -0.71 0.33 -0.31
35 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 0.71 0.3 -0.32
36 AT3G09290 telomerase activator1 telomerase activator1 0.7 0.33 -0.32
37 AT5G64120 Peroxidase superfamily protein 0.7 0.32 -0.31
38 AT2G43880 Pectin lyase-like superfamily protein 0.7 0.3 -0.29
39 AT1G16030 heat shock protein 70B heat shock protein 70B -0.7 0.31 -0.29
40 AT5G39510 Vesicle transport v-SNARE family protein VESICLE TRANSPORT V-SNARE 11,
ATVTI1A, SHOOT GRAVITROPSIM 4,
VESICLE TRANSPORT V-SNARE 11,
VTI1A, ZIG, ZIG1		 0.7 0.3 -0.34
41 AT5G16470 zinc finger (C2H2 type) family protein 0.7 0.3 -0.31
42 AT3G08640 Protein of unknown function (DUF3411) 0.7 0.3 -0.31
43 AT1G22200 Endoplasmic reticulum vesicle transporter protein 0.7 0.33 -0.32
44 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.7 0.33 -0.31
45 AT1G02360 Chitinase family protein 0.7 0.3 -0.33
46 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 0.7 0.32 -0.32
47 AT1G03070 Bax inhibitor-1 family protein -0.69 0.31 -0.31
48 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 -0.69 0.32 -0.31
49 AT2G43600 Chitinase family protein 0.69 0.31 -0.3
50 AT2G45010 PLAC8 family protein 0.69 0.31 -0.33
51 AT5G14790 ARM repeat superfamily protein 0.69 0.32 -0.33
52 AT4G34000 abscisic acid responsive elements-binding factor 3 abscisic acid responsive
elements-binding factor 3, AtABF3,
DC3 PROMOTER-BINDING FACTOR 5		 -0.69 0.3 -0.32
53 AT4G16510 YbaK/aminoacyl-tRNA synthetase-associated domain 0.69 0.31 -0.3
54 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B		 -0.68 0.31 -0.32
55 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 0.68 0.32 -0.28
56 AT5G57230 Thioredoxin superfamily protein 0.68 0.32 -0.33
57 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.29 -0.32
58 AT2G19810 CCCH-type zinc finger family protein AtOZF1, Oxidation-related Zinc
Finger 1		 -0.68 0.33 -0.33
59 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.68 0.3 -0.32
60 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.28
61 AT5G08210 MIR834a; miRNA microRNA834A -0.68 0.29 -0.3
62 AT2G25170 chromatin remodeling factor CHD3 (PICKLE) CHD3, CHR6,
CYTOKININ-HYPERSENSITIVE 2,
GYMNOS, PICKLE, SUPPRESSOR OF SLR
2		 -0.67 0.33 -0.31
63 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein -0.67 0.31 -0.31
64 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 -0.67 0.31 -0.31
65 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 0.67 0.32 -0.3
66 AT1G50250 FTSH protease 1 FTSH protease 1 -0.67 0.31 -0.32
67 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.67 0.31 -0.32
68 AT1G76920 F-box family protein 0.67 0.33 -0.33
69 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.67 0.32 -0.31
70 AT4G33720 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.66 0.33 -0.34
71 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.66 0.32 -0.31
72 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 -0.66 0.32 -0.33
73 AT4G08460 Protein of unknown function (DUF1644) 0.66 0.3 -0.33
74 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 -0.66 0.3 -0.3
75 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 0.66 0.33 -0.32
76 AT4G39390 nucleotide sugar transporter-KT 1 A. THALIANA NUCLEOTIDE SUGAR
TRANSPORTER-KT 1, nucleotide sugar
transporter-KT 1		 0.66 0.3 -0.33
77 AT5G24080 Protein kinase superfamily protein -0.66 0.32 -0.3
78 AT1G31940 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.3 -0.3
79 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.66 0.33 -0.32
80 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 0.66 0.31 -0.31
81 AT4G39675 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.66 0.29 -0.31
82 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.34 -0.31
83 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.65 0.31 -0.33
84 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.65 0.32 -0.31
85 AT2G45620 Nucleotidyltransferase family protein -0.65 0.33 -0.31
86 AT5G19870 Family of unknown function (DUF716) -0.65 0.32 -0.3
87 AT5G35170 adenylate kinase family protein -0.65 0.31 -0.32
88 AT2G25890 Oleosin family protein -0.65 0.31 -0.33
89 AT5G07890 myosin heavy chain-related -0.65 0.32 -0.32
90 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.65 0.3 -0.31
91 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 -0.64 0.29 -0.33
92 AT5G58160 actin binding -0.64 0.29 -0.32
93 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.64 0.32 -0.31
94 AT5G18450 Integrase-type DNA-binding superfamily protein -0.63 0.29 -0.31
95 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 -0.63 0.33 -0.31
96 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 -0.63 0.3 -0.32
97 AT1G22860 Vacuolar sorting protein 39 -0.63 0.3 -0.29
98 AT3G33530 Transducin family protein / WD-40 repeat family protein -0.63 0.32 -0.31
99 AT3G61080 Protein kinase superfamily protein -0.63 0.32 -0.31
100 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.62 0.33 -0.31
101 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.62 0.33 -0.31
102 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 -0.62 0.29 -0.33
103 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.3 -0.29
104 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 -0.62 0.31 -0.31
105 AT1G66140 zinc finger protein 4 zinc finger protein 4 -0.62 0.32 -0.31
106 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF -0.61 0.31 -0.33
107 AT5G16180 ortholog of maize chloroplast splicing factor CRS1 ARABIDOPSIS ORTHOLOG OF MAIZE
CHLOROPLAST SPLICING FACTOR CRS1,
ortholog of maize chloroplast
splicing factor CRS1		 -0.61 0.31 -0.31
108 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.61 0.3 -0.31
109 AT1G54350 ABC transporter family protein ATP-binding cassette D2 -0.61 0.31 -0.33
110 AT3G15280 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: L mature pollen stage, 4
anthesis, petal differentiation and expansion stage; Has 36
Blast hits to 36 proteins in 15 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.33 -0.28
111 AT4G04080 ISCU-like 3 ISCU-LIKE 3, ISCU-like 3 -0.6 0.31 -0.29
112 AT4G31310 AIG2-like (avirulence induced gene) family protein -0.6 0.32 -0.3
113 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.6 0.33 -0.34
114 AT4G31940 cytochrome P450, family 82, subfamily C, polypeptide 4 cytochrome P450, family 82,
subfamily C, polypeptide 4		 -0.6 0.34 -0.33
115 AT4G37740 growth-regulating factor 2 growth-regulating factor 2,
growth-regulating factor 2		 -0.6 0.31 -0.32
116 AT5G20840 Phosphoinositide phosphatase family protein -0.6 0.29 -0.31
117 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.6 0.33 -0.31
118 AT2G21490 dehydrin LEA dehydrin LEA -0.59 0.31 -0.29
119 AT5G40960 Protein of unknown function (DUF 3339) -0.59 0.32 -0.31
120 AT5G22720 F-box/RNI-like superfamily protein -0.59 0.29 -0.3
121 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 -0.59 0.32 -0.31
122 AT3G18570 Oleosin family protein -0.59 0.29 -0.32
123 AT1G19485 Transducin/WD40 repeat-like superfamily protein -0.59 0.32 -0.31
124 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.59 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.84 0.43 -0.44 C0266
126 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		-0.74 0.45 -0.47 C0063
127 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.7 0.44 -0.43 C0210