AT5G28590 : -
Query Information
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AGICode AT5G28590
Description DNA-binding family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G28590 DNA-binding family protein 1 0.3 -0.32
2 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.77 0.31 -0.32
3 AT4G30300 non-intrinsic ABC protein 15 ATP-binding cassette E3,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 15, non-intrinsic ABC
protein 15		 0.77 0.34 -0.31
4 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.76 0.32 -0.3
5 AT5G24230 Lipase class 3-related protein 0.76 0.31 -0.28
6 AT4G29580 Cytidine/deoxycytidylate deaminase family protein 0.76 0.33 -0.3
7 AT4G11950 Protein of unknown function (DUF1191) 0.75 0.31 -0.31
8 AT2G05200 transposable element gene 0.75 0.3 -0.34
9 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 0.74 0.34 -0.3
10 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 0.74 0.3 -0.33
11 AT1G09550 Pectinacetylesterase family protein 0.73 0.31 -0.32
12 AT1G13200 F-box and associated interaction domains-containing protein 0.73 0.32 -0.33
13 AT1G27820 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.73 0.3 -0.31
14 AT3G44210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits
to 15 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.29 -0.31
15 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.33 -0.29
16 AT1G58300 heme oxygenase 4 heme oxygenase 4 0.72 0.31 -0.33
17 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.71 0.32 -0.3
18 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.71 0.3 -0.3
19 AT2G29780 Galactose oxidase/kelch repeat superfamily protein 0.71 0.32 -0.31
20 AT5G34900 transposable element gene 0.71 0.31 -0.29
21 AT4G11590 F-box associated ubiquitination effector family protein 0.7 0.31 -0.33
22 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 0.7 0.32 -0.3
23 AT4G16280 RNA binding;abscisic acid binding FCA 0.7 0.33 -0.3
24 AT1G26820 ribonuclease 3 ribonuclease 3 -0.7 0.32 -0.3
25 ATMG00400 hypothetical protein ORF157 0.7 0.32 -0.33
26 AT2G28680 RmlC-like cupins superfamily protein 0.7 0.31 -0.29
27 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.3 -0.32
28 AT2G44260 Plant protein of unknown function (DUF946) -0.7 0.31 -0.3
29 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.7 0.3 -0.32
30 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 0.7 0.3 -0.31
31 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.7 0.3 -0.34
32 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.7 0.31 -0.31
33 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 0.69 0.31 -0.31
34 AT3G42690 transposable element gene 0.69 0.31 -0.34
35 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.69 0.3 -0.33
36 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 0.69 0.31 -0.31
37 AT5G38260 Protein kinase superfamily protein 0.69 0.31 -0.32
38 AT3G42600 transposable element gene 0.69 0.31 -0.31
39 AT3G46360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44755.1); Has 4 Blast hits to
4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.32 -0.32
40 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 0.69 0.32 -0.31
41 AT1G14750 Cyclin family protein SOLO DANCERS -0.69 0.33 -0.31
42 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.3 -0.32
43 AT3G42850 Mevalonate/galactokinase family protein 0.68 0.33 -0.32
44 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.68 0.29 -0.31
45 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.68 0.33 -0.29
46 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.68 0.3 -0.31
47 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.68 0.32 -0.32
48 AT4G10950 SGNH hydrolase-type esterase superfamily protein 0.67 0.31 -0.32
49 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 -0.67 0.3 -0.29
50 AT3G61390 RING/U-box superfamily protein 0.67 0.32 -0.33
51 AT2G15610 Protein of unknown function (DUF1685) 0.67 0.3 -0.31
52 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.67 0.33 -0.32
53 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 0.67 0.31 -0.32
54 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.67 0.3 -0.3
55 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 0.67 0.32 -0.33
56 AT4G15200 formin 3 formin 3, formin 3 0.67 0.3 -0.31
57 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.67 0.32 -0.32
58 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.67 0.33 -0.32
59 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.67 0.31 -0.32
60 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.66 0.29 -0.31
61 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.66 0.3 -0.3
62 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.66 0.31 -0.34
63 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 0.66 0.32 -0.3
64 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.66 0.3 -0.32
65 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.66 0.31 -0.32
66 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 -0.66 0.3 -0.31
67 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.66 0.32 -0.33
68 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.33 -0.33
69 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 0.66 0.32 -0.31
70 AT4G18420 transposable element gene 0.66 0.32 -0.31
71 AT5G26700 RmlC-like cupins superfamily protein 0.66 0.32 -0.3
72 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.66 0.31 -0.33
73 AT3G48770 DNA binding;ATP binding 0.66 0.31 -0.34
74 AT3G31920 transposable element gene 0.66 0.31 -0.33
75 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.66 0.33 -0.34
76 AT2G18820 transposable element gene 0.65 0.31 -0.32
77 AT3G15490 Regulator of Vps4 activity in the MVB pathway protein 0.65 0.33 -0.32
78 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.65 0.3 -0.33
79 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.65 0.32 -0.31
80 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 0.65 0.33 -0.32
81 AT4G23950 Galactose-binding protein 0.65 0.33 -0.29
82 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.65 0.31 -0.32
83 AT1G45545 Plant protein of unknown function (DUF827) 0.65 0.31 -0.31
84 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.64 0.33 -0.31
85 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 -0.64 0.32 -0.32
86 AT5G35640 Putative endonuclease or glycosyl hydrolase 0.64 0.32 -0.34
87 AT4G18920 Protein of unknown function (DUF1264) -0.64 0.32 -0.32
88 AT4G10260 pfkB-like carbohydrate kinase family protein 0.64 0.3 -0.32
89 AT3G07400 lipase class 3 family protein 0.64 0.34 -0.32
90 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.31 -0.34
91 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.64 0.3 -0.32
92 AT1G44980 pectin methylesterase 7 A. THALIANA PECTIN METHYLESTERASE
7, pectin methylesterase 7		 0.64 0.32 -0.31
93 AT4G33870 Peroxidase superfamily protein 0.64 0.29 -0.33
94 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.33 -0.3
95 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein -0.64 0.29 -0.32
96 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.63 0.31 -0.3
97 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 0.63 0.29 -0.31
98 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.63 0.33 -0.31
99 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.32 -0.3
100 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.63 0.32 -0.31
101 AT5G30470 transposable element gene 0.63 0.32 -0.33
102 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 0.63 0.31 -0.31
103 AT1G63590 Receptor-like protein kinase-related family protein -0.63 0.31 -0.32
104 AT3G14880 BEST Arabidopsis thaliana protein match is: transcription
factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to
560 proteins in 40 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.3
105 AT1G06630 F-box/RNI-like superfamily protein -0.63 0.31 -0.33
106 AT2G06110 transposable element gene 0.63 0.3 -0.31
107 AT4G38760 Protein of unknown function (DUF3414) 0.63 0.33 -0.32
108 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 -0.63 0.32 -0.29
109 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.63 0.33 -0.33
110 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.63 0.32 -0.32
111 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein -0.63 0.32 -0.36
112 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.62 0.3 -0.32
113 AT1G47310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.32 -0.29
114 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.62 0.3 -0.33
115 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.62 0.34 -0.31
116 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.62 0.3 -0.3
117 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.32
118 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.61 0.31 -0.33
119 AT2G37070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits
to 775 proteins in 176 species: Archae - 0; Bacteria - 113;
Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13;
Other Eukaryotes - 556 (source: NCBI BLink).		 -0.61 0.31 -0.31
120 AT4G00940 Dof-type zinc finger DNA-binding family protein -0.61 0.31 -0.32
121 AT3G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.33 -0.33
122 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.32
123 AT2G36090 F-box family protein -0.6 0.31 -0.33
124 AT1G29870 tRNA synthetase class II (G, H, P and S) family protein -0.6 0.32 -0.33
125 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.3
126 AT3G20190 Leucine-rich repeat protein kinase family protein -0.59 0.31 -0.31
127 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.59 0.28 -0.34
128 AT2G38060 phosphate transporter 4;2 phosphate transporter 4;2 -0.59 0.33 -0.32
129 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 -0.59 0.31 -0.32
130 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.58 0.3 -0.34
131 AT1G26860 transposable element gene -0.58 0.3 -0.33
132 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.58 0.3 -0.32
133 AT2G42660 Homeodomain-like superfamily protein -0.58 0.33 -0.32
134 AT1G33540 serine carboxypeptidase-like 18 serine carboxypeptidase-like 18 -0.57 0.3 -0.33
135 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 -0.57 0.32 -0.29
136 AT3G44570 Arabidopsis retrotransposon ORF-1 protein -0.57 0.31 -0.32
137 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 -0.56 0.3 -0.3
138 AT3G57860 UV-B-insensitive 4-like GIGAS CELL 1, OMISSION OF SECOND
DIVISION, UV-B-insensitive 4-like		 -0.56 0.34 -0.3
139 AT5G07930 MEI2 C-terminal RRM only like 2 MEI2 C-terminal RRM only like 2 -0.56 0.3 -0.33
140 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.31 -0.3
141 AT3G04690 Malectin/receptor-like protein kinase family protein ANXUR1 -0.56 0.29 -0.34
142 AT4G38670 Pathogenesis-related thaumatin superfamily protein -0.56 0.31 -0.32
143 AT1G74740 calcium-dependent protein kinase 30 ATCPK30, CALCIUM-DEPENDENT PROTEIN
KINASE 1A, calcium-dependent
protein kinase 30		 -0.56 0.32 -0.3
144 AT5G37055 HIT-type Zinc finger family protein ATSWC6, SERRATED LEAVES AND EARLY
FLOWERING		 -0.56 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
145 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.71 0.48 -0.45 C0136
146 C0219 Pyroglutamic acid (2R,2S)-Pyroglutamic acid 5-Oxoproline gamma-glutamyl cycle (plant pathway),
gamma-glutamyl cycle 		-0.56 0.29 -0.3 C0219