AGICode | AT1G12630 |
Description | Integrase-type DNA-binding superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G12630 | Integrase-type DNA-binding superfamily protein | 1 | 0.33 | -0.32 | |||
2 | AT1G78720 | SecY protein transport family protein | 0.7 | 0.31 | -0.3 | |||
3 | AT1G67220 | histone acetyltransferase of the CBP family 2 | ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 1, HAC02, histone acetyltransferase of the CBP family 2 |
0.7 | 0.31 | -0.33 | ||
4 | AT5G45080 | phloem protein 2-A6 | phloem protein 2-A6, phloem protein 2-A6 |
0.69 | 0.31 | -0.32 | ||
5 | AT3G60760 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.33 | -0.3 | |||
6 | AT3G10580 | Homeodomain-like superfamily protein | 0.68 | 0.3 | -0.33 | |||
7 | AT1G07980 | nuclear factor Y, subunit C10 | nuclear factor Y, subunit C10 | -0.67 | 0.32 | -0.31 | ||
8 | AT3G16380 | poly(A) binding protein 6 | poly(A) binding protein 6 | 0.66 | 0.34 | -0.33 | ||
9 | AT5G38910 | RmlC-like cupins superfamily protein | 0.66 | 0.31 | -0.3 | |||
10 | AT1G26530 | PIN domain-like family protein | -0.66 | 0.3 | -0.32 | |||
11 | AT5G45980 | WUSCHEL related homeobox 8 | STIMPY-LIKE, WUSCHEL related homeobox 8, WUSCHEL related homeobox 9B |
0.66 | 0.32 | -0.32 | ||
12 | AT3G49162 | pseudogene of glycoside hydrolase family 28 protein | -0.66 | 0.31 | -0.33 | |||
13 | AT5G04260 | WCRKC thioredoxin 2 | WCRKC thioredoxin 2 | -0.66 | 0.33 | -0.31 | ||
14 | AT2G01710 | Chaperone DnaJ-domain superfamily protein | -0.66 | 0.32 | -0.29 | |||
15 | AT1G17410 | Nucleoside diphosphate kinase family protein | -0.65 | 0.32 | -0.31 | |||
16 | AT5G14470 | GHMP kinase family protein | -0.65 | 0.31 | -0.33 | |||
17 | AT1G12720 | transposable element gene | 0.65 | 0.28 | -0.31 | |||
18 | AT2G36060 | MMS ZWEI homologue 3 | MMS ZWEI homologue 3, UBIQUITIN E2 VARIANT 1C |
-0.64 | 0.31 | -0.3 | ||
19 | AT5G11050 | myb domain protein 64 | myb domain protein 64, myb domain protein 64 |
0.64 | 0.31 | -0.31 | ||
20 | AT5G32470 | Haem oxygenase-like, multi-helical | 0.64 | 0.31 | -0.32 | |||
21 | AT1G27550 | F-box family protein | -0.64 | 0.31 | -0.33 | |||
22 | AT1G55410 | pseudogene, CHP-rich zinc finger protein, putative, similar to putative CHP-rich zinc finger protein GB:CAB77744 GI:7268217 from (Arabidopsis thaliana) |
0.63 | 0.32 | -0.33 | |||
23 | AT3G12660 | FASCICLIN-like arabinogalactan protein 14 precursor | FASCICLIN-like arabinogalactan protein 14 precursor |
0.62 | 0.31 | -0.31 | ||
24 | AT4G27690 | vacuolar protein sorting 26B | vacuolar protein sorting 26B | -0.62 | 0.31 | -0.29 | ||
25 | AT5G55950 | Nucleotide/sugar transporter family protein | 0.62 | 0.32 | -0.33 | |||
26 | AT4G11690 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.62 | 0.31 | -0.31 | |||
27 | AT1G47680 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.31 | -0.3 | |||
28 | AT3G07440 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.61 | 0.3 | -0.31 | |||
29 | AT2G04600 | transposable element gene | 0.61 | 0.31 | -0.32 | |||
30 | AT1G74550 | cytochrome P450, family 98, subfamily A, polypeptide 9 | cytochrome P450, family 98, subfamily A, polypeptide 9 |
0.61 | 0.3 | -0.3 | ||
31 | AT4G18720 | Transcription factor IIS protein | -0.6 | 0.32 | -0.34 | |||
32 | AT1G18290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.3 | |||
33 | AT3G59270 | FBD-like domain family protein | 0.6 | 0.32 | -0.31 | |||
34 | AT2G24255 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to 121 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.33 | -0.32 | |||
35 | AT3G09130 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.3 | -0.33 | |||
36 | AT3G04020 | unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.6 | 0.3 | -0.29 | |||
37 | AT5G63620 | GroES-like zinc-binding alcohol dehydrogenase family protein |
-0.6 | 0.33 | -0.3 | |||
38 | AT4G10690 | transposable element gene | 0.6 | 0.33 | -0.3 | |||
39 | AT5G49320 | Protein of unknown function (DUF1218) | 0.59 | 0.31 | -0.32 | |||
40 | AT3G50250 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.33 | -0.33 | |||
41 | AT3G22350 | F-box and associated interaction domains-containing protein | 0.59 | 0.33 | -0.31 | |||
42 | AT3G13280 | Putative endonuclease or glycosyl hydrolase | 0.59 | 0.32 | -0.31 | |||
43 | AT1G22885 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.29 | -0.31 | |||
44 | AT2G22630 | AGAMOUS-like 17 | AGAMOUS-like 17 | -0.59 | 0.32 | -0.33 | ||
45 | AT2G27395 | pseudogene of cysteine protease-related | 0.59 | 0.33 | -0.31 | |||
46 | AT2G37360 | ABC-2 type transporter family protein | ATP-binding cassette G2 | 0.59 | 0.32 | -0.31 | ||
47 | AT2G16835 | Aquaporin-like superfamily protein | 0.58 | 0.33 | -0.33 | |||
48 | AT3G19070 | Homeodomain-like superfamily protein | 0.58 | 0.33 | -0.32 | |||
49 | AT2G10440 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). |
0.58 | 0.31 | -0.34 | |||
50 | AT4G03950 | Nucleotide/sugar transporter family protein | 0.58 | 0.33 | -0.31 | |||
51 | AT5G09780 | Transcriptional factor B3 family protein | 0.58 | 0.33 | -0.3 | |||
52 | AT2G41570 | transposable element gene | -0.58 | 0.31 | -0.31 | |||
53 | AT3G21470 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.57 | 0.29 | -0.31 | |||
54 | AT5G10770 | Eukaryotic aspartyl protease family protein | -0.57 | 0.33 | -0.29 | |||
55 | AT5G42960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.32 | -0.32 | |||
56 | AT3G17590 | transcription regulatory protein SNF5, putative (BSH) | BUSHY GROWTH, CHE1 | -0.57 | 0.33 | -0.31 | ||
57 | AT5G22980 | serine carboxypeptidase-like 47 | serine carboxypeptidase-like 47 | 0.57 | 0.33 | -0.32 | ||
58 | AT2G31570 | glutathione peroxidase 2 | glutathione peroxidase 2, glutathione peroxidase 2 |
-0.57 | 0.34 | -0.31 | ||
59 | AT5G43680 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
60 | AT2G43150 | Proline-rich extensin-like family protein | 0.57 | 0.31 | -0.32 | |||
61 | AT3G42400 | transposable element gene | -0.56 | 0.32 | -0.35 | |||
62 | AT5G46295 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.55 | 0.28 | -0.3 | |||
63 | AT5G59460 | scarecrow-like transcription factor 11 (SCL11) | -0.55 | 0.29 | -0.31 | |||
64 | AT5G23330 | Nucleotidylyl transferase superfamily protein | -0.54 | 0.31 | -0.31 | |||
65 | AT5G16790 | Tho complex subunit 7/Mft1p | AtTHO7, THO7 | -0.53 | 0.32 | -0.3 | ||
66 | AT3G44760 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.32 | -0.3 | |||
67 | AT3G47800 | Galactose mutarotase-like superfamily protein | -0.52 | 0.32 | -0.34 | |||
68 | AT3G21865 | peroxin 22 | peroxin 22 | -0.52 | 0.32 | -0.35 | ||
69 | AT1G48820 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.52 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
70 | C0016 | S-Adenosylmethionine | S-Adenosyl-L-methionine | S-Adenosyl-L-methionine | ethylene biosynthesis I (plants), scopoletin biosynthesis, quercetinsulphates biosynthesis, siroheme biosynthesis, gibberellin inactivation II (methylation), suberin biosynthesis, volatile benzenoid biosynthesis I (ester formation), S-adenosyl-L-methionine cycle II, methylhalides biosynthesis (plants), S-methylmethionine cycle, ubiquinol-9 biosynthesis (eukaryotic), nicotianamine biosynthesis, methionine biosynthesis II, spermine biosynthesis, choline biosynthesis II, diphthamide biosynthesis, homogalacturonan biosynthesis, phosphatidylcholine biosynthesis II, methylquercetin biosynthesis, plastoquinol biosynthesis, chlorophyllide a biosynthesis I, ferulate and sinapate biosynthesis, ubiquinol-10 biosynthesis (eukaryotic), phenylpropanoid biosynthesis, free phenylpropanoid acid biosynthesis, seleno-amino acid detoxification and volatilization I, plant sterol biosynthesis, lipoate biosynthesis and incorporation I, methyl indole-3-acetate interconversion, cyclopropane and cyclopropene fatty acid biosynthesis, spermidine biosynthesis I, thiamine biosynthesis II, methionine salvage pathway, spermidine hydroxycinnamic acid conjugates biosynthesis, simple coumarins biosynthesis, phosphatidylcholine biosynthesis IV, glutathione-mediated detoxification II, S-adenosyl-L-methionine biosynthesis, methionine degradation I (to homocysteine), phosphatidylcholine biosynthesis III, phylloquinol biosynthesis, choline biosynthesis I, biotin biosynthesis II, vitamin E biosynthesis |
0.68 | 0.45 | -0.46 |