AT1G12610 : DWARF AND DELAYED FLOWERING 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G12610
Description Integrase-type DNA-binding superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12610 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 1 1 0.31 -0.29
2 AT1G73540 nudix hydrolase homolog 21 nudix hydrolase homolog 21, nudix
hydrolase homolog 21		 0.83 0.32 -0.32
3 AT5G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 8 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.82 0.32 -0.34
4 AT4G25470 C-repeat/DRE binding factor 2 ATCBF2, C-repeat/DRE binding
factor 2, DRE/CRT-BINDING PROTEIN
1C, FREEZING TOLERANCE QTL 4		 0.8 0.34 -0.32
5 AT4G27280 Calcium-binding EF-hand family protein 0.79 0.31 -0.31
6 AT4G29780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits
to 944 proteins in 87 species: Archae - 0; Bacteria - 0;
Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 0.79 0.31 -0.31
7 AT1G18740 Protein of unknown function (DUF793) 0.79 0.32 -0.32
8 AT4G24570 dicarboxylate carrier 2 dicarboxylate carrier 2 0.78 0.31 -0.31
9 AT1G61340 F-box family protein 0.76 0.33 -0.32
10 AT4G25490 C-repeat/DRE binding factor 1 ATCBF1, C-repeat/DRE binding
factor 1, DRE BINDING PROTEIN 1B		 0.76 0.31 -0.33
11 AT3G50060 myb domain protein 77 myb domain protein 77 0.76 0.33 -0.32
12 AT5G61600 ethylene response factor 104 ethylene response factor 104 0.76 0.32 -0.32
13 AT1G19770 purine permease 14 purine permease 14, purine
permease 14		 0.76 0.35 -0.31
14 AT5G51190 Integrase-type DNA-binding superfamily protein 0.75 0.33 -0.32
15 AT4G34410 redox responsive transcription factor 1 redox responsive transcription
factor 1		 0.75 0.33 -0.33
16 AT1G27100 Actin cross-linking protein 0.75 0.29 -0.31
17 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46		 0.74 0.3 -0.32
18 AT4G27654 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.32 -0.32
19 AT3G46620 zinc finger (C3HC4-type RING finger) family protein 0.74 0.28 -0.3
20 AT4G11280 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 1-aminocyclopropane-1-carboxylic
acid (acc) synthase 6, ATACS6		 0.74 0.29 -0.3
21 AT1G15010 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits
to 71 proteins in 13 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.3 -0.32
22 AT4G27657 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G54145.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.33 -0.32
23 AT4G27652 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G27657.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.74 0.32 -0.3
24 AT5G42380 calmodulin like 37 calmodulin like 37, CALMODULIN
LIKE 39		 0.72 0.31 -0.32
25 AT2G26190 calmodulin-binding family protein 0.72 0.32 -0.31
26 AT5G47230 ethylene responsive element binding factor 5 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR- 5, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
5, ethylene responsive element
binding factor 5		 0.72 0.29 -0.31
27 AT1G19210 Integrase-type DNA-binding superfamily protein 0.72 0.32 -0.31
28 AT5G37770 EF hand calcium-binding protein family CALMODULIN-LIKE 24, TOUCH 2 0.7 0.31 -0.31
29 AT1G23710 Protein of unknown function (DUF1645) 0.7 0.31 -0.3
30 AT2G40000 ortholog of sugar beet HS1 PRO-1 2 ARABIDOPSIS ORTHOLOG OF SUGAR BEET
HS1 PRO-1 2, ortholog of sugar
beet HS1 PRO-1 2		 0.69 0.32 -0.34
31 AT3G02840 ARM repeat superfamily protein 0.69 0.31 -0.29
32 AT3G46600 GRAS family transcription factor 0.69 0.32 -0.32
33 AT3G15530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.32 -0.31
34 AT1G48110 evolutionarily conserved C-terminal region 7 evolutionarily conserved
C-terminal region 7		 -0.67 0.3 -0.31
35 AT1G74930 Integrase-type DNA-binding superfamily protein ORA47 0.67 0.32 -0.3
36 AT5G11070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.67 0.31 -0.32
37 AT4G17490 ethylene responsive element binding factor 6 ethylene responsive element
binding factor 6, ERF-6-6,
ethylene responsive element
binding factor 6		 0.67 0.33 -0.31
38 AT1G33760 Integrase-type DNA-binding superfamily protein 0.67 0.33 -0.3
39 AT2G24600 Ankyrin repeat family protein 0.66 0.31 -0.32
40 AT4G01950 glycerol-3-phosphate acyltransferase 3 ATGPAT3, glycerol-3-phosphate
acyltransferase 3		 0.66 0.33 -0.31
41 AT3G61190 BON association protein 1 BON association protein 1 0.66 0.31 -0.29
42 AT5G45340 cytochrome P450, family 707, subfamily A, polypeptide 3 cytochrome P450, family 707,
subfamily A, polypeptide 3		 0.66 0.33 -0.3
43 AT2G25250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast
hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.3 -0.3
44 AT5G39670 Calcium-binding EF-hand family protein 0.64 0.31 -0.31
45 AT2G41010 calmodulin (CAM)-binding protein of 25 kDa calmodulin (CAM)-binding protein
of 25 kDa, calmodulin
(CAM)-binding protein of 25 kDa		 0.64 0.31 -0.32
46 AT1G14480 Ankyrin repeat family protein 0.64 0.32 -0.28
47 AT4G11160 Translation initiation factor 2, small GTP-binding protein -0.64 0.29 -0.32
48 AT2G41451 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G57200.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.63 0.31 -0.32
49 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.63 0.31 -0.35
50 AT1G22190 Integrase-type DNA-binding superfamily protein related to AP2 4 0.63 0.32 -0.32
51 AT5G26920 Cam-binding protein 60-like G Cam-binding protein 60-like G 0.63 0.34 -0.3
52 AT5G15400 U-box domain-containing protein -0.63 0.31 -0.31
53 AT1G49780 plant U-box 26 plant U-box 26 0.63 0.32 -0.32
54 AT4G26510 uridine kinase-like 4 uridine kinase-like 4 -0.62 0.32 -0.34
55 AT1G58420 Uncharacterised conserved protein UCP031279 0.62 0.32 -0.32
56 AT4G37260 myb domain protein 73 ATMYB73, myb domain protein 73 0.62 0.32 -0.28
57 AT1G09950 RESPONSE TO ABA AND SALT 1 RESPONSE TO ABA AND SALT 1 0.61 0.34 -0.3
58 AT2G28390 SAND family protein -0.61 0.32 -0.32
59 AT3G09870 SAUR-like auxin-responsive protein family 0.61 0.3 -0.31
60 AT3G24520 heat shock transcription factor C1 AT-HSFC1, heat shock transcription
factor C1		 0.61 0.3 -0.31
61 AT3G60860 SEC7-like guanine nucleotide exchange family protein -0.61 0.31 -0.32
62 AT2G39170 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function NEP (InterPro:IPR019320); Has 57 Blast
hits to 57 proteins in 26 species: Archae - 0; Bacteria -
0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.61 0.27 -0.32
63 AT3G25600 Calcium-binding EF-hand family protein 0.6 0.32 -0.35
64 AT5G64440 fatty acid amide hydrolase fatty acid amide hydrolase, fatty
acid amide hydrolase		 -0.6 0.31 -0.32
65 AT1G68720 tRNA arginine adenosine deaminase ARABIDOPSIS THALIANA TRNA
ADENOSINE DEAMINASE A, tRNA
arginine adenosine deaminase		 -0.6 0.3 -0.33
66 AT5G19240 Glycoprotein membrane precursor GPI-anchored 0.6 0.31 -0.32
67 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein 0.6 0.31 -0.32
68 AT5G03555 permease, cytosine/purines, uracil, thiamine, allantoin
family protein		 -0.59 0.32 -0.32
69 AT3G48650 pseudogene, At14a-related protein, similar to At14a
(GI:11994571 and GI:11994573) (Arabidopsis thaliana)		 0.59 0.32 -0.32
70 AT5G15910 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.34 -0.34
71 AT5G49050 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to stress; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016),
Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729); BEST Arabidopsis thaliana protein
match is: Adenine nucleotide alpha hydrolases-like
superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.3 -0.32
72 AT5G44060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.28 -0.32
73 AT1G44750 purine permease 11 purine permease 11, purine
permease 11		 -0.58 0.31 -0.32
74 AT4G32640 Sec23/Sec24 protein transport family protein -0.58 0.32 -0.31
75 AT3G55840 Hs1pro-1 protein 0.58 0.33 -0.31
76 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 -0.58 0.32 -0.34
77 AT5G16210 HEAT repeat-containing protein -0.58 0.31 -0.32
78 AT5G65950 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal
(InterPro:IPR012880), Foie gras liver health family 1
(InterPro:IPR021773); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.57 0.3 -0.28
79 AT4G24980 nodulin MtN21 /EamA-like transporter family protein -0.57 0.29 -0.32
80 AT2G20790 clathrin adaptor complexes medium subunit family protein -0.57 0.31 -0.31
81 AT4G35985 Senescence/dehydration-associated protein-related 0.57 0.32 -0.32
82 AT2G13560 NAD-dependent malic enzyme 1 NAD-dependent malic enzyme 1 -0.57 0.33 -0.31
83 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 0.57 0.34 -0.32
84 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family 0.57 0.34 -0.31
85 AT5G40460 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits
to 87 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.34 -0.33
86 AT1G26110 decapping 5 decapping 5 -0.56 0.32 -0.32
87 AT4G18300 Trimeric LpxA-like enzyme -0.56 0.32 -0.33
88 AT5G11040 TRS120 AtTRS120, TRS120 -0.56 0.31 -0.3
89 AT2G07360 SH3 domain-containing protein -0.56 0.32 -0.33
90 AT4G02890 Ubiquitin family protein UBQ14 -0.56 0.32 -0.32
91 AT3G30820 Arabidopsis retrotransposon ORF-1 protein 0.56 0.31 -0.3
92 AT1G10560 plant U-box 18 ARABIDOPSIS THALIANA PLANT U-BOX
18, plant U-box 18		 0.55 0.3 -0.33
93 AT1G67880 beta-1,4-N-acetylglucosaminyltransferase family protein 0.55 0.3 -0.31
94 AT4G04630 Protein of unknown function, DUF584 0.55 0.32 -0.33
95 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 -0.55 0.31 -0.29
96 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 -0.55 0.31 -0.32
97 AT1G49840 Protein of unknown function (DUF620) 0.55 0.31 -0.31
98 AT5G46710 PLATZ transcription factor family protein 0.54 0.3 -0.3
99 AT1G71820 SEC6 SEC6 -0.54 0.31 -0.31
100 AT2G36910 ATP binding cassette subfamily B1 ATP-binding cassette B1,
ARABIDOPSIS THALIANA P
GLYCOPROTEIN1, P-GLYCOPROTEIN 1		 -0.54 0.32 -0.3
101 AT2G47060 Protein kinase superfamily protein Pto-interacting 1-4 0.54 0.33 -0.32
102 AT5G15800 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 2, SEPALLATA1 -0.53 0.34 -0.27
103 AT2G46340 SPA (suppressor of phyA-105) protein family SUPPRESSOR OF PHYA-105 1 -0.53 0.31 -0.31
104 AT1G22660 Polynucleotide adenylyltransferase family protein -0.53 0.31 -0.31
105 AT1G79990 structural molecules -0.53 0.32 -0.33
106 AT5G19400 Telomerase activating protein Est1 SMG7 -0.52 0.33 -0.3
107 AT3G52640 Zn-dependent exopeptidases superfamily protein -0.52 0.29 -0.3
108 AT4G38640 Plasma-membrane choline transporter family protein -0.52 0.31 -0.3
109 AT5G28220 Protein prenylyltransferase superfamily protein -0.52 0.32 -0.36
110 AT1G66770 Nodulin MtN3 family protein AtSWEET6, SWEET6 -0.52 0.33 -0.32
111 AT1G67930 Golgi transport complex protein-related -0.52 0.33 -0.33
112 AT5G52710 Copper transport protein family -0.51 0.33 -0.3
113 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 -0.51 0.31 -0.3
114 AT5G41170 Pentatricopeptide repeat (PPR-like) superfamily protein -0.51 0.35 -0.34
115 AT1G49800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sepal, male gametophyte,
stamen; EXPRESSED DURING: 4 anthesis; Has 12 Blast hits to
12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 -0.51 0.3 -0.31
116 AT1G34550 Protein of unknown function (DUF616) EMBRYO DEFECTIVE 2756 -0.51 0.31 -0.32
117 AT1G21660 Chaperone DnaJ-domain superfamily protein -0.51 0.31 -0.31
118 AT5G09850 Transcription elongation factor (TFIIS) family protein -0.5 0.31 -0.31
119 AT5G08750 RING/FYVE/PHD zinc finger superfamily protein -0.5 0.31 -0.34
120 AT4G03390 STRUBBELIG-receptor family 3 STRUBBELIG-receptor family 3 -0.5 0.32 -0.33
121 AT5G47490 RGPR-related -0.5 0.31 -0.32
122 AT4G24470 GATA-type zinc finger protein with TIFY domain GATA TRANSCRIPTION FACTOR 25,
TIFY1, Zinc-finger protein
expressed in Inflorescence
Meristem		 -0.5 0.32 -0.3
123 AT1G31780 CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex
COG6 (InterPro:IPR010490); Has 384 Blast hits to 379
proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa
- 151; Fungi - 156; Plants - 42; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 -0.5 0.32 -0.29
124 AT4G17420 Tryptophan RNA-binding attenuator protein-like -0.49 0.31 -0.33
125 AT1G80400 RING/U-box superfamily protein -0.49 0.3 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		-0.61 0.42 -0.45 C0073