AT1G12620 : -
Query Information
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AGICode AT1G12620
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.31
2 AT3G42430 transposable element gene -0.77 0.28 -0.3
3 AT5G01310 APRATAXIN-like APRATAXIN-like 0.76 0.32 -0.31
4 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.75 0.3 -0.29
5 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.74 0.33 -0.34
6 AT5G03280 NRAMP metal ion transporter family protein ATEIN2, CYTOKININ RESISTANT 1,
ETHYLENE INSENSITIVE 2, ENHANCED
RESPONSE TO ABA3, ORESARA 2,
ORESARA 3, PIR2		 0.74 0.31 -0.31
7 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 -0.73 0.31 -0.31
8 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 0.72 0.32 -0.32
9 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 -0.72 0.31 -0.31
10 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.72 0.34 -0.33
11 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.3
12 AT1G30350 Pectin lyase-like superfamily protein 0.71 0.31 -0.3
13 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.31 -0.32
14 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.33 -0.33
15 AT4G08210 Pentatricopeptide repeat (PPR-like) superfamily protein 0.7 0.34 -0.3
16 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.7 0.31 -0.32
17 AT1G69330 RING/U-box superfamily protein 0.7 0.31 -0.32
18 AT3G19510 Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain		 HAT3.1 0.69 0.3 -0.31
19 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.29
20 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.69 0.32 -0.33
21 AT5G14470 GHMP kinase family protein -0.69 0.3 -0.32
22 AT3G59490 unknown protein; Has 30 Blast hits to 30 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.68 0.31 -0.31
23 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.68 0.34 -0.33
24 AT1G75290 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.3 -0.32
25 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.68 0.32 -0.32
26 AT3G16620 translocon outer complex protein 120 ARABIDOPSIS THALIANA TRANSLOCON
OUTER COMPLEX PROTEIN 120,
translocon outer complex protein
120		 0.68 0.32 -0.33
27 AT1G58300 heme oxygenase 4 heme oxygenase 4 0.68 0.32 -0.33
28 AT1G34080 transposable element gene 0.68 0.3 -0.33
29 AT5G17140 Cysteine proteinases superfamily protein 0.68 0.29 -0.33
30 AT5G24910 cytochrome P450, family 714, subfamily A, polypeptide 1 cytochrome P450, family 714,
subfamily A, polypeptide 1,
EUI-like p450 A1		 0.67 0.31 -0.32
31 AT1G35380 transposable element gene -0.67 0.3 -0.3
32 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.67 0.31 -0.3
33 AT5G10695 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.3 -0.32
34 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.67 0.3 -0.33
35 AT2G32030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.67 0.32 -0.31
36 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 -0.67 0.31 -0.32
37 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.66 0.32 -0.29
38 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 0.66 0.3 -0.31
39 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 0.66 0.3 -0.32
40 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.31 -0.33
41 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.3 -0.32
42 AT5G52860 ABC-2 type transporter family protein ATP-binding cassette G8 0.66 0.32 -0.33
43 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.66 0.29 -0.33
44 AT2G11360 transposable element gene 0.65 0.34 -0.31
45 AT1G31810 Formin Homology 14 Formin Homology 14 0.65 0.32 -0.33
46 AT1G50740 Transmembrane proteins 14C -0.65 0.32 -0.33
47 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 0.65 0.31 -0.31
48 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.31 -0.33
49 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 -0.65 0.3 -0.32
50 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.64 0.32 -0.3
51 AT2G10010 transposable element gene 0.64 0.33 -0.31
52 AT1G64790 ILITYHIA ILITYHIA 0.64 0.31 -0.3
53 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.64 0.31 -0.31
54 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 0.64 0.31 -0.3
55 AT5G06320 NDR1/HIN1-like 3 NDR1/HIN1-like 3 -0.64 0.32 -0.31
56 AT5G22600 FBD / Leucine Rich Repeat domains containing protein -0.64 0.31 -0.33
57 ATMG01410 open reading frame 204 open reading frame 204 -0.64 0.31 -0.31
58 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.32 -0.32
59 AT4G18840 Pentatricopeptide repeat (PPR-like) superfamily protein 0.63 0.32 -0.3
60 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.63 0.32 -0.31
61 AT5G44510 target of AVRB operation1 target of AVRB operation1 0.63 0.3 -0.31
62 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.63 0.33 -0.31
63 AT1G15880 golgi snare 11 atgos11, golgi snare 11 -0.63 0.33 -0.35
64 AT3G42290 transposable element gene -0.63 0.31 -0.32
65 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.63 0.32 -0.32
66 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.63 0.32 -0.31
67 AT5G58550 ETO1-like 2 ETO1-like 2 0.63 0.3 -0.29
68 AT4G13160 Protein of unknown function, DUF593 -0.63 0.3 -0.31
69 AT5G26700 RmlC-like cupins superfamily protein 0.63 0.32 -0.32
70 AT1G67570 Protein of unknown function (DUF3537) 0.63 0.31 -0.31
71 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.33 -0.29
72 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.62 0.33 -0.32
73 AT5G38500 Domain of unknown function (DUF313) 0.62 0.31 -0.31
74 AT3G17690 cyclic nucleotide gated channel 19 CYCLIC NUCLEOTIDE-GATED CHANNEL
19, cyclic nucleotide gated
channel 19		 -0.62 0.31 -0.33
75 AT5G27220 Frigida-like protein 0.62 0.32 -0.31
76 AT3G24500 multiprotein bridging factor 1C ATMBF1C, multiprotein bridging
factor 1C		 -0.62 0.32 -0.31
77 AT5G48140 Pectin lyase-like superfamily protein -0.62 0.32 -0.31
78 AT2G40070 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.62 0.33 -0.31
79 AT2G06640 transposable element gene -0.62 0.32 -0.31
80 AT5G44880 transposable element gene -0.62 0.3 -0.31
81 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 -0.62 0.32 -0.3
82 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.61 0.34 -0.32
83 AT5G14890 NHL domain-containing protein -0.61 0.32 -0.31
84 AT2G06890 transposable element gene 0.61 0.28 -0.31
85 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.61 0.31 -0.33
86 AT4G34150 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.61 0.32 -0.34
87 AT1G32320 MAP kinase kinase 10 MAP kinase kinase 10, MAP kinase
kinase 10		 -0.61 0.3 -0.31
88 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.32 -0.28
89 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.61 0.31 -0.3
90 AT2G33220 GRIM-19 protein -0.61 0.3 -0.34
91 AT4G28400 Protein phosphatase 2C family protein -0.61 0.33 -0.31
92 AT4G11690 Pentatricopeptide repeat (PPR-like) superfamily protein 0.61 0.31 -0.3
93 AT1G43870 transposable element gene -0.61 0.31 -0.29
94 AT1G43680 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast
hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.3 -0.3
95 AT2G26150 heat shock transcription factor A2 heat shock transcription factor
A2, heat shock transcription
factor A2		 -0.6 0.33 -0.33
96 AT4G08030 transposable element gene -0.6 0.31 -0.32
97 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 -0.6 0.31 -0.31
98 AT2G26970 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.6 0.31 -0.31
99 AT3G20190 Leucine-rich repeat protein kinase family protein -0.6 0.32 -0.32
100 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.6 0.31 -0.33
101 AT5G06020 Plant self-incompatibility protein S1 family -0.6 0.33 -0.31
102 AT3G30440 transposable element gene -0.59 0.31 -0.3
103 AT1G70130 Concanavalin A-like lectin protein kinase family protein -0.59 0.33 -0.31
104 AT3G51560 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.31 -0.32
105 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.58 0.32 -0.33
106 AT4G18330 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.58 0.32 -0.32
107 AT1G63590 Receptor-like protein kinase-related family protein -0.58 0.32 -0.32
108 AT4G17483 alpha/beta-Hydrolases superfamily protein -0.58 0.34 -0.31
109 AT2G33530 serine carboxypeptidase-like 46 serine carboxypeptidase-like 46 -0.58 0.33 -0.3
110 AT4G25720 glutaminyl cyclase ARABIDOPSIS THALIANA GLUTAMINYL
CYCLASE, glutaminyl cyclase,
GLUTAMINYL CYCLOTRANSFERASE		 -0.58 0.32 -0.32
111 AT4G34270 TIP41-like family protein -0.58 0.32 -0.31
112 AT2G04000 transposable element gene -0.57 0.31 -0.3
113 AT5G42440 Protein kinase superfamily protein -0.57 0.33 -0.31
114 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.32 -0.3
115 AT3G32910 transposable element gene -0.57 0.35 -0.32
116 AT3G50590 Transducin/WD40 repeat-like superfamily protein -0.57 0.31 -0.31
117 AT1G14750 Cyclin family protein SOLO DANCERS -0.57 0.33 -0.32
118 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.57 0.31 -0.31
119 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 -0.57 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0127 Isorhamnetin-hexosyl-rhamnoside - - - 0.67 0.46 -0.42