AT1G22330 : -
Query Information
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AGICode AT1G22330
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.31 -0.31
2 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.31 -0.31
3 AT3G27210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25
species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7;
Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 -0.84 0.32 -0.32
4 AT1G23480 cellulose synthase-like A3 cellulose synthase-like A3,
ATCSLA3, CSLA03, cellulose
synthase-like A3, CELLULOSE
SYNTHASE-LIKE A3		 0.82 0.3 -0.32
5 AT1G54060 6B-interacting protein 1-like 1 6B-interacting protein 1-like 1 0.8 0.31 -0.32
6 AT1G55330 arabinogalactan protein 21 arabinogalactan protein 21,
ARABINOGALACTAN PROTEIN 21		 0.8 0.3 -0.32
7 AT5G50000 Protein kinase superfamily protein 0.8 0.32 -0.32
8 AT2G01070 Lung seven transmembrane receptor family protein 0.79 0.31 -0.31
9 AT5G10700 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.79 0.28 -0.31
10 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 0.78 0.33 -0.29
11 AT2G45890 RHO guanyl-nucleotide exchange factor 4 RHO GUANYL-NUCLEOTIDE EXCHANGE
FACTOR 4, ROOT HAIR SPECIFIC 11,
RHO guanyl-nucleotide exchange
factor 4		 0.78 0.31 -0.3
12 AT2G02590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Putative small
multi-drug export (InterPro:IPR009577); Has 405 Blast hits
to 405 proteins in 185 species: Archae - 65; Bacteria -
295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0;
Other Eukaryotes - 22 (source: NCBI BLink).		 0.78 0.33 -0.32
13 AT3G02180 SPIRAL1-like3 SPIRAL1-like3 0.77 0.3 -0.34
14 AT5G15350 early nodulin-like protein 17 AtENODL17, early nodulin-like
protein 17		 0.77 0.32 -0.32
15 AT2G46225 ABI-1-like 1 ABI-1-like 1 0.77 0.32 -0.31
16 AT5G46790 PYR1-like 1 PYR1-like 1, regulatory components
of ABA receptor 12		 0.77 0.29 -0.32
17 AT3G07010 Pectin lyase-like superfamily protein 0.77 0.33 -0.33
18 AT5G08330 TCP family transcription factor AtTCP11, TCP domain protein 11 0.77 0.34 -0.32
19 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 0.77 0.31 -0.32
20 AT3G21200 proton gradient regulation 7 proton gradient regulation 7 0.76 0.29 -0.3
21 AT1G05850 Chitinase family protein ATCTL1, CHITINASE-LIKE PROTEIN 1,
ECTOPIC DEPOSITION OF LIGNIN IN
PITH, ECTOPIC DEPOSITION OF LIGNIN
IN PITH 1, ECTOPIC ROOT HAIR 2,
SENSITIVE TO HOT TEMPERATURES 2,
POM-POM1		 0.76 0.3 -0.31
22 AT3G54690 Sugar isomerase (SIS) family protein SETH3 0.76 0.32 -0.3
23 AT2G42900 Plant basic secretory protein (BSP) family protein 0.76 0.32 -0.31
24 AT4G28050 tetraspanin7 tetraspanin7 0.76 0.31 -0.3
25 AT3G11700 FASCICLIN-like arabinogalactan protein 18 precursor FASCICLIN-like arabinogalactan
protein 18 precursor		 0.76 0.29 -0.32
26 AT3G58120 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP61, BZIP61 0.76 0.32 -0.31
27 AT5G15600 SPIRAL1-like4 SPIRAL1-like4 0.76 0.31 -0.31
28 AT1G18640 3-phosphoserine phosphatase 3-phosphoserine phosphatase 0.75 0.32 -0.31
29 AT2G17265 homoserine kinase DOWNY MILDEW RESISTANT 1,
homoserine kinase		 0.75 0.31 -0.31
30 AT3G45230 hydroxyproline-rich glycoprotein family protein 0.75 0.34 -0.29
31 AT1G03870 FASCICLIN-like arabinoogalactan 9 FASCICLIN-like arabinoogalactan 9 0.75 0.32 -0.31
32 AT2G15680 Calcium-binding EF-hand family protein AtCML30, calmodulin-like 30 0.75 0.3 -0.33
33 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein 0.74 0.32 -0.34
34 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A 0.74 0.31 -0.32
35 AT1G64640 early nodulin-like protein 8 AtENODL8, early nodulin-like
protein 8		 0.74 0.34 -0.34
36 AT5G32450 RNA binding (RRM/RBD/RNP motifs) family protein 0.74 0.31 -0.32
37 AT1G69480 EXS (ERD1/XPR1/SYG1) family protein -0.74 0.31 -0.32
38 AT2G19760 profilin 1 PROFILIN 1, profilin 1 0.74 0.29 -0.32
39 AT3G49680 branched-chain aminotransferase 3 ATBCAT-3, branched-chain
aminotransferase 3		 0.74 0.31 -0.33
40 AT5G16590 Leucine-rich repeat protein kinase family protein Leucine rich repeat protein 1 0.73 0.33 -0.3
41 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.3 -0.3
42 AT3G24310 myb domain protein 305 MYB DOMAIN PROTEIN 71, myb domain
protein 305		 -0.73 0.33 -0.31
43 AT3G01120 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 AtCGS1, A. thaliana cystathionine
gamma-synthetase 1, CYSTATHIONINE
GAMMA-SYNTHASE, CYSTATHIONINE
GAMMA-SYNTHASE 1, METHIONINE
OVERACCUMULATION 1		 0.73 0.33 -0.31
44 AT2G30520 Phototropic-responsive NPH3 family protein ROOT PHOTOTROPISM 2 0.73 0.29 -0.31
45 AT3G06750 hydroxyproline-rich glycoprotein family protein 0.72 0.31 -0.31
46 AT2G44740 cyclin p4;1 cyclin p4;1 0.72 0.32 -0.31
47 AT5G23860 tubulin beta 8 tubulin beta 8 0.72 0.32 -0.31
48 AT5G60490 FASCICLIN-like arabinogalactan-protein 12 FASCICLIN-like
arabinogalactan-protein 12		 0.72 0.32 -0.32
49 AT4G32330 TPX2 (targeting protein for Xklp2) protein family 0.72 0.31 -0.31
50 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 0.72 0.3 -0.34
51 AT4G10310 high-affinity K+ transporter 1 ATHKT1, high-affinity K+
transporter 1		 0.72 0.34 -0.31
52 AT4G03110 RNA-binding protein-defense related 1 RNA-binding protein-defense
related 1, RNA-binding
protein-defense related 1		 0.72 0.31 -0.3
53 AT4G17190 farnesyl diphosphate synthase 2 farnesyl diphosphate synthase 2 0.72 0.31 -0.31
54 AT5G17850 Sodium/calcium exchanger family protein -0.72 0.3 -0.32
55 AT2G30520 Phototropic-responsive NPH3 family protein ROOT PHOTOTROPISM 2 0.71 0.32 -0.31
56 AT4G20870 fatty acid hydroxylase 2 ARABIDOPSIS FATTY ACID HYDROXYLASE
2, fatty acid hydroxylase 2		 0.71 0.33 -0.31
57 AT2G32720 cytochrome B5 isoform B ARABIDOPSIS CYTOCHROME B5 ISOFORM
B, B5 #4, cytochrome B5 isoform B		 0.71 0.33 -0.32
58 AT3G48750 cell division control 2 cell division control 2, CDC2A,
CDC2AAT, CDK2, CDKA1, CDKA;1		 0.71 0.32 -0.29
59 AT1G49590 C2H2 and C2HC zinc fingers superfamily protein 0.71 0.32 -0.32
60 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.71 0.32 -0.3
61 AT1G21480 Exostosin family protein 0.71 0.32 -0.33
62 AT5G64850 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting
protein 4, defence response (InterPro:IPR008700); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.71 0.29 -0.3
63 AT5G11110 sucrose phosphate synthase 2F sucrose phosphate synthase 2F,
KAONASHI 2, SUCROSE PHOSPHATE
SYNTHASE 1, sucrose phosphate
synthase 2F, sucrose-phosphate
synthase A2		 -0.71 0.32 -0.32
64 AT4G34215 Domain of unknown function (DUF303) 0.71 0.3 -0.32
65 AT1G30120 pyruvate dehydrogenase E1 beta pyruvate dehydrogenase E1 beta 0.71 0.31 -0.31
66 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.32
67 AT1G10020 Protein of unknown function (DUF1005) 0.7 0.32 -0.31
68 AT1G06060 LisH and RanBPM domains containing protein 0.7 0.31 -0.34
69 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B		 0.7 0.3 -0.31
70 AT4G18460 D-Tyr-tRNA(Tyr) deacylase family protein 0.7 0.32 -0.29
71 AT5G40980 Protein of unknown function (DUF 3339) 0.7 0.31 -0.31
72 AT5G56280 COP9 signalosome subunit 6A COP9 signalosome subunit 6A 0.7 0.33 -0.31
73 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 -0.7 0.3 -0.32
74 AT1G75840 RAC-like GTP binding protein 5 RAC-like GTP binding protein 5,
ARABIDOPSIS THALIANA
GERANYLGERANYLATED PROTEIN 3,
RHO-LIKE GTP BINDING PROTEIN 4,
RHO-LIKE GTP BINDING PROTEIN 4		 0.69 0.31 -0.34
75 AT2G35880 TPX2 (targeting protein for Xklp2) protein family 0.69 0.32 -0.31
76 AT4G30080 auxin response factor 16 auxin response factor 16 -0.69 0.31 -0.32
77 AT4G34960 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.69 0.31 -0.33
78 AT5G52560 UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase,
UDP-sugar pyrophosphorylase		 0.69 0.32 -0.29
79 AT2G07050 cycloartenol synthase 1 cycloartenol synthase 1 0.69 0.32 -0.32
80 AT3G12110 actin-11 actin-11 0.69 0.31 -0.32
81 AT1G78030 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (duplicated DUF1399)
(TAIR:AT4G37900.1); Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.29 -0.32
82 AT1G12100 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.69 0.33 -0.31
83 AT2G21200 SAUR-like auxin-responsive protein family 0.69 0.33 -0.31
84 AT2G46330 arabinogalactan protein 16 arabinogalactan protein 16,
ATAGP16		 0.69 0.3 -0.31
85 AT1G76080 chloroplastic drought-induced stress protein of 32 kD ARABIDOPSIS THALIANA CHLOROPLASTIC
DROUGHT-INDUCED STRESS PROTEIN OF
32 KD, chloroplastic
drought-induced stress protein of
32 kD		 0.69 0.33 -0.32
86 AT5G14550 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.69 0.3 -0.31
87 AT1G80820 cinnamoyl coa reductase ATCCR2, cinnamoyl coa reductase -0.69 0.33 -0.32
88 AT3G26700 Protein kinase superfamily protein 0.69 0.31 -0.32
89 AT1G80940 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.69 0.32 -0.3
90 AT2G23120 Late embryogenesis abundant protein, group 6 -0.69 0.31 -0.31
91 AT2G22090 RNA-binding (RRM/RBD/RNP motifs) family protein UBA1A 0.69 0.3 -0.34
92 AT1G65690 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.69 0.31 -0.31
93 AT1G30540 Actin-like ATPase superfamily protein 0.68 0.32 -0.31
94 AT4G35410 Clathrin adaptor complex small chain family protein 0.68 0.31 -0.33
95 AT1G19830 SAUR-like auxin-responsive protein family 0.68 0.34 -0.32
96 AT3G07950 rhomboid protein-related 0.68 0.34 -0.31
97 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.68 0.3 -0.3
98 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B -0.67 0.32 -0.28
99 AT3G50970 dehydrin family protein LOW TEMPERATURE-INDUCED 30, XERO2 -0.67 0.3 -0.32
100 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.67 0.33 -0.33
101 AT5G58700 phosphatidylinositol-speciwc phospholipase C4 ATPLC4,
phosphatidylinositol-speciwc
phospholipase C4		 -0.66 0.33 -0.31
102 AT1G49720 abscisic acid responsive element-binding factor 1 abscisic acid responsive
element-binding factor 1		 -0.66 0.3 -0.28
103 AT2G36270 Basic-leucine zipper (bZIP) transcription factor family
protein		 ABA INSENSITIVE 5,
GROWTH-INSENSITIVITY TO ABA 1		 -0.66 0.33 -0.32
104 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.3
105 AT1G11210 Protein of unknown function (DUF761) -0.65 0.33 -0.3
106 AT5G06760 Late Embryogenesis Abundant 4-5 Late Embryogenesis Abundant 4-5,
Late Embryogenesis Abundant 4-5		 -0.65 0.31 -0.32
107 AT5G01850 Protein kinase superfamily protein -0.65 0.32 -0.31
108 AT2G39710 Eukaryotic aspartyl protease family protein -0.65 0.32 -0.3
109 AT2G22590 UDP-Glycosyltransferase superfamily protein -0.64 0.33 -0.32
110 AT5G41580 RING/U-box superfamily protein -0.64 0.31 -0.3
111 AT2G31990 Exostosin family protein -0.64 0.33 -0.32
112 AT1G11610 cytochrome P450, family 71, subfamily A, polypeptide 18 cytochrome P450, family 71,
subfamily A, polypeptide 18		 -0.64 0.31 -0.32
113 AT5G07990 Cytochrome P450 superfamily protein CYTOCHROME P450 75B1, D501,
TRANSPARENT TESTA 7		 -0.64 0.29 -0.32
114 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.63 0.3 -0.3
115 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.63 0.32 -0.31
116 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 -0.63 0.33 -0.33
117 AT1G20100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits
to 438 proteins in 92 species: Archae - 0; Bacteria - 14;
Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.63 0.32 -0.32
118 AT1G16850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, leaf whorl,
male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six
leaves visible, LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast
hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.32 -0.32
119 AT4G00200 AT hook motif DNA-binding family protein -0.62 0.32 -0.31
120 AT5G56790 Protein kinase superfamily protein -0.62 0.32 -0.31
121 AT1G75370 Sec14p-like phosphatidylinositol transfer family protein -0.62 0.33 -0.31
122 AT1G07500 unknown protein; Has 4 Blast hits to 4 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.32
123 AT1G67850 Protein of unknown function (DUF707) -0.61 0.31 -0.31
124 AT2G26600 Glycosyl hydrolase superfamily protein -0.61 0.3 -0.32
125 AT5G58380 SOS3-interacting protein 1 CBL-INTERACTING PROTEIN KINASE 10,
PKS2, SOS3-interacting protein 1,
SNF1-RELATED PROTEIN KINASE 3.8		 -0.61 0.32 -0.31
126 AT2G24560 GDSL-like Lipase/Acylhydrolase family protein -0.61 0.3 -0.32
127 AT5G64390 RNA-binding KH domain-containing protein HUA ENHANCER 4 -0.61 0.31 -0.32
128 AT1G20450 Dehydrin family protein EARLY RESPONSIVE TO DEHYDRATION
10, LOW TEMPERATURE INDUCED 29,
LOW TEMPERATURE INDUCED 45		 -0.61 0.31 -0.32
129 AT5G01450 RING/U-box superfamily protein -0.61 0.3 -0.31
130 AT5G66780 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.31 -0.32
131 AT5G43930 Transducin family protein / WD-40 repeat family protein -0.6 0.32 -0.31
132 AT5G51710 K+ efflux antiporter 5 ARABIDOPSIS THALIANA K+ EFFLUX
ANTIPORTER 5, K+ efflux antiporter
5		 -0.6 0.31 -0.31
133 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.6 0.3 -0.33
134 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein -0.6 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
135 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.86 0.43 -0.49 C0017