AT1G22330 : -
Query Information
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AGICode AT1G22330
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.33 -0.3
2 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.32 -0.31
3 AT5G15350 early nodulin-like protein 17 AtENODL17, early nodulin-like
protein 17		 0.82 0.32 -0.33
4 AT2G19760 profilin 1 PROFILIN 1, profilin 1 0.81 0.31 -0.32
5 AT1G54060 6B-interacting protein 1-like 1 6B-interacting protein 1-like 1 0.79 0.32 -0.29
6 AT1G69480 EXS (ERD1/XPR1/SYG1) family protein -0.79 0.31 -0.33
7 AT1G23480 cellulose synthase-like A3 cellulose synthase-like A3,
ATCSLA3, CSLA03, cellulose
synthase-like A3, CELLULOSE
SYNTHASE-LIKE A3		 0.79 0.31 -0.32
8 AT2G01070 Lung seven transmembrane receptor family protein 0.77 0.31 -0.3
9 AT1G21480 Exostosin family protein 0.77 0.3 -0.35
10 AT2G45890 RHO guanyl-nucleotide exchange factor 4 RHO GUANYL-NUCLEOTIDE EXCHANGE
FACTOR 4, ROOT HAIR SPECIFIC 11,
RHO guanyl-nucleotide exchange
factor 4		 0.77 0.32 -0.32
11 AT3G27210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25
species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7;
Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 -0.77 0.32 -0.31
12 AT2G02590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Putative small
multi-drug export (InterPro:IPR009577); Has 405 Blast hits
to 405 proteins in 185 species: Archae - 65; Bacteria -
295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0;
Other Eukaryotes - 22 (source: NCBI BLink).		 0.77 0.32 -0.31
13 AT3G06750 hydroxyproline-rich glycoprotein family protein 0.76 0.31 -0.34
14 AT1G55330 arabinogalactan protein 21 arabinogalactan protein 21,
ARABINOGALACTAN PROTEIN 21		 0.76 0.35 -0.31
15 AT5G50000 Protein kinase superfamily protein 0.76 0.31 -0.3
16 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B		 0.76 0.32 -0.32
17 AT5G56280 COP9 signalosome subunit 6A COP9 signalosome subunit 6A 0.76 0.31 -0.34
18 AT3G48750 cell division control 2 cell division control 2, CDC2A,
CDC2AAT, CDK2, CDKA1, CDKA;1		 0.75 0.35 -0.32
19 AT1G10020 Protein of unknown function (DUF1005) 0.75 0.32 -0.3
20 AT4G17190 farnesyl diphosphate synthase 2 farnesyl diphosphate synthase 2 0.75 0.33 -0.33
21 AT4G34960 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.74 0.31 -0.33
22 AT1G06060 LisH and RanBPM domains containing protein 0.74 0.32 -0.3
23 AT1G68000 phosphatidylinositol synthase 1 PHOSPHATIDYLINOSITOL SYNTHASE,
phosphatidylinositol synthase 1,
phosphatidylinositol synthase 1		 0.74 0.34 -0.31
24 AT2G23110 Late embryogenesis abundant protein, group 6 -0.74 0.33 -0.3
25 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.32 -0.34
26 AT1G05850 Chitinase family protein ATCTL1, CHITINASE-LIKE PROTEIN 1,
ECTOPIC DEPOSITION OF LIGNIN IN
PITH, ECTOPIC DEPOSITION OF LIGNIN
IN PITH 1, ECTOPIC ROOT HAIR 2,
SENSITIVE TO HOT TEMPERATURES 2,
POM-POM1		 0.73 0.32 -0.33
27 AT5G05610 alfin-like 1 alfin-like 1 0.73 0.32 -0.32
28 AT1G18640 3-phosphoserine phosphatase 3-phosphoserine phosphatase 0.73 0.3 -0.3
29 AT2G42900 Plant basic secretory protein (BSP) family protein 0.73 0.3 -0.29
30 AT5G32450 RNA binding (RRM/RBD/RNP motifs) family protein 0.73 0.34 -0.34
31 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 0.73 0.3 -0.34
32 AT5G60490 FASCICLIN-like arabinogalactan-protein 12 FASCICLIN-like
arabinogalactan-protein 12		 0.73 0.31 -0.34
33 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 0.73 0.31 -0.31
34 AT3G58120 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP61, BZIP61 0.73 0.32 -0.29
35 AT1G75840 RAC-like GTP binding protein 5 RAC-like GTP binding protein 5,
ARABIDOPSIS THALIANA
GERANYLGERANYLATED PROTEIN 3,
RHO-LIKE GTP BINDING PROTEIN 4,
RHO-LIKE GTP BINDING PROTEIN 4		 0.72 0.31 -0.3
36 AT4G14000 Putative methyltransferase family protein 0.72 0.31 -0.33
37 AT5G53180 polypyrimidine tract-binding protein 2 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 2, polypyrimidine
tract-binding protein 2		 0.72 0.28 -0.29
38 AT2G46225 ABI-1-like 1 ABI-1-like 1 0.72 0.3 -0.31
39 AT5G62980 Dihydroneopterin aldolase FOLB2 0.72 0.31 -0.3
40 AT5G08330 TCP family transcription factor AtTCP11, TCP domain protein 11 0.72 0.31 -0.31
41 AT1G27310 nuclear transport factor 2A nuclear transport factor 2A 0.71 0.33 -0.3
42 AT4G15690 Thioredoxin superfamily protein 0.71 0.33 -0.31
43 AT5G61590 Integrase-type DNA-binding superfamily protein 0.71 0.33 -0.34
44 AT2G29560 cytosolic enolase cytosolic enolase 0.71 0.29 -0.32
45 AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 TRICHOME BIREFRINGENCE-LIKE 34 0.71 0.31 -0.32
46 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 0.71 0.3 -0.31
47 AT4G03110 RNA-binding protein-defense related 1 RNA-binding protein-defense
related 1, RNA-binding
protein-defense related 1		 0.71 0.32 -0.32
48 AT5G15600 SPIRAL1-like4 SPIRAL1-like4 0.71 0.3 -0.3
49 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 0.7 0.32 -0.31
50 AT4G35335 Nucleotide-sugar transporter family protein 0.7 0.34 -0.32
51 AT3G07950 rhomboid protein-related 0.7 0.32 -0.32
52 AT1G64980 Nucleotide-diphospho-sugar transferases superfamily protein 0.7 0.27 -0.33
53 AT5G46790 PYR1-like 1 PYR1-like 1, regulatory components
of ABA receptor 12		 0.7 0.3 -0.29
54 AT5G15770 glucose-6-phosphate acetyltransferase 1 glucose-6-phosphate
acetyltransferase 1,
glucose-6-phosphate
acetyltransferase 1		 0.7 0.33 -0.35
55 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.7 0.31 -0.32
56 AT2G47320 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.7 0.35 -0.32
57 AT2G04350 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 8 -0.7 0.33 -0.34
58 AT2G18245 alpha/beta-Hydrolases superfamily protein 0.7 0.31 -0.32
59 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent -0.7 0.33 -0.3
60 AT1G11610 cytochrome P450, family 71, subfamily A, polypeptide 18 cytochrome P450, family 71,
subfamily A, polypeptide 18		 -0.7 0.32 -0.35
61 AT4G36750 Quinone reductase family protein 0.69 0.32 -0.31
62 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 -0.69 0.32 -0.32
63 AT5G59910 Histone superfamily protein HTB4 0.69 0.34 -0.34
64 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A 0.69 0.32 -0.3
65 AT4G34215 Domain of unknown function (DUF303) 0.69 0.32 -0.31
66 AT5G10700 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.69 0.32 -0.32
67 AT3G11700 FASCICLIN-like arabinogalactan protein 18 precursor FASCICLIN-like arabinogalactan
protein 18 precursor		 0.69 0.32 -0.31
68 AT1G24170 Nucleotide-diphospho-sugar transferases superfamily protein GALACTURONOSYLTRANSFERASE-LIKE 8,
LGT9		 0.69 0.29 -0.29
69 AT2G35880 TPX2 (targeting protein for Xklp2) protein family 0.68 0.32 -0.29
70 AT1G30540 Actin-like ATPase superfamily protein 0.68 0.31 -0.32
71 AT5G23850 Arabidopsis thaliana protein of unknown function (DUF821) -0.68 0.33 -0.33
72 AT2G21200 SAUR-like auxin-responsive protein family 0.68 0.3 -0.31
73 AT5G23860 tubulin beta 8 tubulin beta 8 0.68 0.3 -0.31
74 AT5G50375 cyclopropyl isomerase cyclopropyl isomerase 0.68 0.32 -0.31
75 AT5G11110 sucrose phosphate synthase 2F sucrose phosphate synthase 2F,
KAONASHI 2, SUCROSE PHOSPHATE
SYNTHASE 1, sucrose phosphate
synthase 2F, sucrose-phosphate
synthase A2		 -0.68 0.32 -0.3
76 AT2G01580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits
to 129 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.32 -0.3
77 AT1G80940 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.68 0.32 -0.3
78 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.68 0.3 -0.31
79 AT2G30520 Phototropic-responsive NPH3 family protein ROOT PHOTOTROPISM 2 0.68 0.32 -0.32
80 AT4G20870 fatty acid hydroxylase 2 ARABIDOPSIS FATTY ACID HYDROXYLASE
2, fatty acid hydroxylase 2		 0.67 0.32 -0.33
81 AT4G18593 dual specificity protein phosphatase-related 0.67 0.35 -0.33
82 AT3G55350 PIF / Ping-Pong family of plant transposases 0.67 0.33 -0.32
83 AT5G35740 Carbohydrate-binding X8 domain superfamily protein 0.67 0.31 -0.31
84 AT4G35410 Clathrin adaptor complex small chain family protein 0.67 0.3 -0.29
85 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.67 0.33 -0.32
86 AT4G19890 Pentatricopeptide repeat (PPR-like) superfamily protein -0.67 0.31 -0.31
87 AT1G75960 AMP-dependent synthetase and ligase family protein 0.67 0.31 -0.32
88 AT1G14290 sphingoid base hydroxylase 2 sphingoid base hydroxylase 2 0.67 0.32 -0.32
89 AT4G27760 NAD(P)-binding Rossmann-fold superfamily protein FOREVER YOUNG, FEY3 0.67 0.3 -0.33
90 AT3G24310 myb domain protein 305 MYB DOMAIN PROTEIN 71, myb domain
protein 305		 -0.67 0.3 -0.34
91 AT2G20930 SNARE-like superfamily protein 0.67 0.31 -0.31
92 AT1G20100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits
to 438 proteins in 92 species: Archae - 0; Bacteria - 14;
Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.67 0.31 -0.31
93 AT1G72430 SAUR-like auxin-responsive protein family 0.67 0.3 -0.31
94 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.35
95 AT3G59820 LETM1-like protein -0.66 0.31 -0.31
96 AT5G65710 HAESA-like 2 HAESA-like 2 -0.66 0.31 -0.31
97 AT5G11730 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.66 0.31 -0.32
98 AT1G72830 nuclear factor Y, subunit A3 ATHAP2C, HAP2C, nuclear factor Y,
subunit A3		 -0.66 0.33 -0.35
99 AT1G80820 cinnamoyl coa reductase ATCCR2, cinnamoyl coa reductase -0.66 0.3 -0.32
100 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.66 0.33 -0.32
101 AT1G03790 Zinc finger C-x8-C-x5-C-x3-H type family protein SOMNUS -0.65 0.33 -0.3
102 AT5G14550 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.65 0.31 -0.33
103 AT5G64390 RNA-binding KH domain-containing protein HUA ENHANCER 4 -0.65 0.32 -0.32
104 AT3G07274 unknown pseudogene -0.65 0.35 -0.3
105 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 -0.65 0.31 -0.28
106 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.65 0.33 -0.32
107 AT2G35300 Late embryogenesis abundant protein, group 1 protein late embryogenesis abundant 4-2,
late embryogenesis abundant 18,
late embryogenesis abundant 4-2		 -0.64 0.32 -0.3
108 AT1G62130 AAA-type ATPase family protein -0.64 0.32 -0.3
109 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.64 0.32 -0.31
110 AT2G36270 Basic-leucine zipper (bZIP) transcription factor family
protein		 ABA INSENSITIVE 5,
GROWTH-INSENSITIVITY TO ABA 1		 -0.64 0.3 -0.3
111 AT1G79950 RAD3-like DNA-binding helicase protein -0.64 0.31 -0.32
112 AT2G31990 Exostosin family protein -0.64 0.33 -0.33
113 AT2G39710 Eukaryotic aspartyl protease family protein -0.64 0.31 -0.32
114 AT3G17520 Late embryogenesis abundant protein (LEA) family protein -0.63 0.3 -0.3
115 AT2G06110 transposable element gene -0.63 0.32 -0.31
116 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.63 0.3 -0.33
117 AT2G41280 late embryogenesis abundant protein (M10) / LEA protein M10 ATM10, M10 -0.63 0.34 -0.32
118 AT3G27810 myb domain protein 21 myb domain protein 21, ARABIDOPSIS
THALIANA MYB DOMAIN PROTEIN 3,
myb domain protein 21		 -0.62 0.35 -0.32
119 AT4G00200 AT hook motif DNA-binding family protein -0.62 0.33 -0.33
120 AT4G17410 DWNN domain, a CCHC-type zinc finger -0.62 0.33 -0.31
121 AT5G56790 Protein kinase superfamily protein -0.62 0.31 -0.3
122 AT5G06510 nuclear factor Y, subunit A10 nuclear factor Y, subunit A10 -0.62 0.32 -0.33
123 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.62 0.33 -0.31
124 AT2G26600 Glycosyl hydrolase superfamily protein -0.61 0.31 -0.33
125 AT2G43570 chitinase, putative chitinase, putative -0.61 0.32 -0.29
126 AT1G01830 ARM repeat superfamily protein -0.61 0.33 -0.32
127 AT1G36160 acetyl-CoA carboxylase 1 acetyl-CoA carboxylase 1, AT-ACC1,
EMBRYO DEFECTIVE 22, GURKE,
GLOSSYHEAD 1, PASTICCINO 3		 -0.61 0.33 -0.35
128 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 -0.61 0.32 -0.31
129 AT2G41690 heat shock transcription factor B3 heat shock transcription factor
B3, HEAT SHOCK TRANSCRIPTION
FACTOR B3, heat shock
transcription factor B3		 -0.61 0.33 -0.3
130 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 -0.6 0.31 -0.31
131 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 -0.6 0.3 -0.33
132 AT3G62240 RING/U-box superfamily protein -0.6 0.32 -0.29
133 AT4G24480 Protein kinase superfamily protein -0.6 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.89 0.45 -0.46 C0017