AT1G06960 : -
Query Information
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AGICode AT1G06960
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G06960 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.33 -0.3
2 AT3G29280 unknown protein; Has 24 Blast hits to 24 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.84 0.3 -0.32
3 AT5G38300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 12 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.79 0.3 -0.31
4 AT5G03050 unknown protein; Has 33 Blast hits to 33 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.31 -0.3
5 AT5G16910 cellulose-synthase like D2 ATCSLD2, cellulose-synthase like
D2		 -0.78 0.33 -0.31
6 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.78 0.31 -0.3
7 AT4G18060 SH3 domain-containing protein 0.77 0.32 -0.3
8 AT5G01750 Protein of unknown function (DUF567) 0.76 0.31 -0.3
9 AT1G76390 ARM repeat superfamily protein plant U-box 43 -0.76 0.31 -0.32
10 AT5G21105 Plant L-ascorbate oxidase -0.75 0.33 -0.32
11 AT2G44745 WRKY family transcription factor 0.75 0.33 -0.33
12 AT2G05710 aconitase 3 aconitase 3 -0.75 0.32 -0.35
13 AT2G45820 Remorin family protein 0.74 0.32 -0.31
14 AT1G32350 alternative oxidase 1D alternative oxidase 1D -0.74 0.28 -0.32
15 AT5G25570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.73 0.31 -0.32
16 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 -0.73 0.31 -0.3
17 AT5G46800 Mitochondrial substrate carrier family protein A BOUT DE SOUFFLE 0.73 0.31 -0.32
18 AT2G30350 Excinuclease ABC, C subunit, N-terminal 0.73 0.3 -0.3
19 AT3G10450 serine carboxypeptidase-like 7 serine carboxypeptidase-like 7 -0.72 0.3 -0.31
20 AT4G39080 vacuolar proton ATPase A3 vacuolar proton ATPase A3 -0.72 0.33 -0.33
21 AT1G75770 unknown protein; Has 6 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.31 -0.31
22 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 -0.72 0.32 -0.32
23 AT3G16330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits
to 109 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.32
24 AT4G35020 RAC-like 3 RAC-like 3, ATROP6, RAC-like 3,
RHO1PS, RHO-RELATED PROTEIN FROM
PLANTS 6		 0.72 0.33 -0.31
25 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4		 -0.72 0.33 -0.31
26 AT1G08800 Protein of unknown function, DUF593 -0.71 0.32 -0.33
27 AT1G12640 MBOAT (membrane bound O-acyl transferase) family protein -0.71 0.29 -0.33
28 AT5G44240 aminophospholipid ATPase 2 aminophospholipid ATPase 2 -0.7 0.32 -0.31
29 AT1G01420 UDP-glucosyl transferase 72B3 UDP-glucosyl transferase 72B3 0.7 0.31 -0.33
30 AT2G44150 histone-lysine N-methyltransferase ASHH3 histone-lysine N-methyltransferase
ASHH3, SET DOMAIN-CONTAINING
PROTEIN 7		 0.7 0.32 -0.3
31 AT4G08180 OSBP(oxysterol binding protein)-related protein 1C OSBP(oxysterol binding
protein)-related protein 1C		 -0.7 0.33 -0.31
32 AT4G28950 RHO-related protein from plants 9 Arabidopsis RAC-like 7, ATRAC7,
ATROP9, RAC7, RHO-related protein
from plants 9		 0.7 0.31 -0.32
33 AT3G06370 sodium hydrogen exchanger 4 ATNHX4, sodium hydrogen exchanger
4		 0.7 0.32 -0.32
34 AT2G20010 Protein of unknown function (DUF810) -0.7 0.3 -0.33
35 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 -0.7 0.34 -0.33
36 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 -0.7 0.31 -0.31
37 AT3G51880 high mobility group B1 AtHMGB1, high mobility group B1,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D1		 0.7 0.3 -0.32
38 AT3G49210 O-acyltransferase (WSD1-like) family protein -0.7 0.33 -0.32
39 AT1G18030 Protein phosphatase 2C family protein 0.7 0.32 -0.31
40 AT2G03120 signal peptide peptidase signal peptide peptidase, signal
peptide peptidase		 -0.69 0.32 -0.32
41 AT4G08310 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Histone chaperone domain CHZ (InterPro:IPR019098); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G44780.2); Has 53711 Blast hits to 33687 proteins
in 1618 species: Archae - 142; Bacteria - 4400; Metazoa -
24303; Fungi - 6688; Plants - 2484; Viruses - 449; Other
Eukaryotes - 15245 (source: NCBI BLink).		 0.69 0.31 -0.32
42 AT1G65490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.31 -0.31
43 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.69 0.32 -0.31
44 AT2G42100 Actin-like ATPase superfamily protein 0.69 0.33 -0.3
45 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 -0.69 0.3 -0.31
46 AT2G38250 Homeodomain-like superfamily protein -0.69 0.32 -0.29
47 AT1G31460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23270.1); Has 1251
Blast hits to 756 proteins in 185 species: Archae - 0;
Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58;
Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink).		 0.68 0.28 -0.32
48 AT1G36510 Nucleic acid-binding proteins superfamily -0.68 0.33 -0.31
49 AT2G01990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G14630.1); Has 118 Blast hits
to 118 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.33
50 AT1G15270 Translation machinery associated TMA7 -0.68 0.31 -0.3
51 AT4G16660 heat shock protein 70 (Hsp 70) family protein -0.68 0.29 -0.32
52 AT5G08120 movement protein binding protein 2C movement protein binding protein
2C		 0.68 0.3 -0.31
53 AT3G01920 DHBP synthase RibB-like alpha/beta domain 0.68 0.31 -0.32
54 AT1G80950 Phospholipid/glycerol acyltransferase family protein -0.68 0.33 -0.32
55 AT4G20280 TBP-associated factor 11 TBP-associated factor 11 0.68 0.32 -0.31
56 AT1G59650 Protein of unknown function (DUF1336) CW14 -0.68 0.33 -0.31
57 AT4G11160 Translation initiation factor 2, small GTP-binding protein -0.67 0.32 -0.29
58 AT4G27780 acyl-CoA binding protein 2 acyl-CoA binding protein 2 -0.67 0.3 -0.32
59 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 -0.67 0.32 -0.32
60 AT5G15400 U-box domain-containing protein -0.67 0.32 -0.33
61 AT1G10480 zinc finger protein 5 zinc finger protein 5 -0.66 0.29 -0.31
62 AT2G46520 cellular apoptosis susceptibility protein, putative /
importin-alpha re-exporter, putative		 -0.66 0.3 -0.32
63 AT1G78920 vacuolar H+-pyrophosphatase 2 AtVHP2;1, vacuolar
H+-pyrophosphatase 2,
VACUOLAR-PYROPHOSPHATASE LIKE
PROTEIN 1, VHP2;1, vacuolar
H+-pyrophosphatase 2		 -0.66 0.31 -0.3
64 AT1G63770 Peptidase M1 family protein -0.66 0.33 -0.32
65 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 -0.66 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
66 C0145 Maltotetraose - Maltotetraose starch degradation II -0.73 0.44 -0.45 C0145