AGICode | AT1G07190 |
Description | BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in 47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G07190 | BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in 47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
1 | 0.31 | -0.33 | |||
2 | AT5G50320 | radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein |
Elongator protein 3, enhancer-of-asymmetric leaves-two 1, ELONGATA 3, Elongator protein 3, HISTONE ACETYLTRANSFERASE 8, HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 3 |
-0.64 | 0.31 | -0.3 | ||
3 | AT1G05030 | Major facilitator superfamily protein | 0.64 | 0.31 | -0.34 | |||
4 | AT5G61400 | Pentatricopeptide repeat (PPR) superfamily protein | -0.63 | 0.33 | -0.31 | |||
5 | AT2G43150 | Proline-rich extensin-like family protein | 0.63 | 0.32 | -0.32 | |||
6 | AT3G05020 | acyl carrier protein 1 | ACYL CARRIER PROTEIN, acyl carrier protein 1 |
-0.61 | 0.32 | -0.31 | ||
7 | AT3G61010 | Ferritin/ribonucleotide reductase-like family protein | 0.61 | 0.29 | -0.32 | |||
8 | AT3G55850 | Amidohydrolase family | LONG AFTER FAR-RED 3, LONG AFTER FAR-RED 3 ISOFORM 1, LAF3 ISOFORM 2 |
0.61 | 0.3 | -0.31 | ||
9 | AT1G59520 | CW7 | CW7 | 0.6 | 0.3 | -0.31 | ||
10 | AT1G57906 | unknown protein; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.29 | -0.34 | |||
11 | AT2G34870 | hydroxyproline-rich glycoprotein family protein | maternal effect embryo arrest 26 | -0.59 | 0.3 | -0.31 | ||
12 | AT3G09600 | Homeodomain-like superfamily protein | LHY-CCA1-LIKE5, REVEILLE 8 | 0.59 | 0.32 | -0.34 | ||
13 | AT1G71780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.3 | -0.32 | |||
14 | AT1G30880 | unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.32 | |||
15 | AT5G15250 | FTSH protease 6 | ATFTSH6, FTSH protease 6 | 0.58 | 0.34 | -0.31 | ||
16 | AT1G71490 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.58 | 0.31 | -0.32 | |||
17 | AT5G40200 | DegP protease 9 | DegP protease 9 | -0.58 | 0.32 | -0.31 | ||
18 | AT5G19680 | Leucine-rich repeat (LRR) family protein | -0.58 | 0.3 | -0.29 | |||
19 | AT4G27850 | Glycine-rich protein family | 0.58 | 0.31 | -0.31 | |||
20 | AT3G19120 | PIF / Ping-Pong family of plant transposases | -0.57 | 0.31 | -0.3 | |||
21 | AT3G18030 | HAL3-like protein A | ATHAL3, ARABIDOPSIS THALIANA HAL3-LIKE PROTEIN A, HALOTOLERANCE DETERMINANT 3, HAL3-like protein A |
-0.57 | 0.32 | -0.3 | ||
22 | AT1G35890 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
0.57 | 0.29 | -0.33 | |||
23 | AT3G01015 | TPX2 (targeting protein for Xklp2) protein family | 0.56 | 0.34 | -0.34 | |||
24 | AT1G78150 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.33 | -0.33 | |||
25 | AT1G01030 | AP2/B3-like transcriptional factor family protein | NGATHA3 | 0.56 | 0.32 | -0.32 | ||
26 | AT3G58000 | VQ motif-containing protein | 0.56 | 0.33 | -0.32 | |||
27 | AT1G22090 | Protein of unknown function (DUF626) | embryo defective 2204 | 0.56 | 0.31 | -0.34 | ||
28 | AT5G46140 | Protein of unknown function (DUF295) | 0.55 | 0.31 | -0.3 | |||
29 | AT4G02250 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.55 | 0.28 | -0.31 | |||
30 | AT1G17260 | autoinhibited H(+)-ATPase isoform 10 | autoinhibited H(+)-ATPase isoform 10 |
0.55 | 0.33 | -0.33 | ||
31 | AT4G16870 | transposable element gene | 0.55 | 0.3 | -0.31 | |||
32 | AT1G72860 | Disease resistance protein (TIR-NBS-LRR class) family | 0.55 | 0.31 | -0.31 | |||
33 | AT1G09150 | pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein |
-0.55 | 0.32 | -0.28 | |||
34 | AT1G15830 | unknown protein; Has 165982 Blast hits to 57214 proteins in 2459 species: Archae - 263; Bacteria - 44622; Metazoa - 55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other Eukaryotes - 34550 (source: NCBI BLink). |
0.54 | 0.34 | -0.34 | |||
35 | AT2G26510 | Xanthine/uracil permease family protein | pigment defective embryo 135 | -0.54 | 0.31 | -0.33 | ||
36 | AT3G58210 | TRAF-like family protein | -0.53 | 0.3 | -0.34 | |||
37 | AT2G21660 | cold, circadian rhythm, and rna binding 2 | GLYCINE RICH PROTEIN 7, cold, circadian rhythm, and rna binding 2, GLYCINE-RICH RNA-BINDING PROTEIN 7, GLYCINE-RICH RNA-BINDING PROTEIN 7 |
-0.53 | 0.3 | -0.33 | ||
38 | AT3G50300 | HXXXD-type acyl-transferase family protein | -0.53 | 0.3 | -0.32 | |||
39 | AT2G27650 | Ubiquitin carboxyl-terminal hydrolase-related protein | 0.53 | 0.32 | -0.33 | |||
40 | AT5G58830 | Subtilisin-like serine endopeptidase family protein | 0.53 | 0.3 | -0.3 | |||
41 | AT5G28640 | SSXT family protein | ANGUSTIFOLIA 3, ARABIDOPSIS GRF1-INTERACTING FACTOR 1, GRF1-INTERACTING FACTOR, GRF1-INTERACTING FACTOR 1 |
-0.53 | 0.33 | -0.33 | ||
42 | AT4G34970 | actin depolymerizing factor 9 | actin depolymerizing factor 9 | -0.53 | 0.3 | -0.3 | ||
43 | AT1G35860 | translocon outer membrane complex 75-I | translocon outer membrane complex 75-I |
0.52 | 0.31 | -0.31 | ||
44 | AT3G09160 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.52 | 0.31 | -0.32 | |||
45 | AT2G04063 | glycine-rich protein | -0.52 | 0.34 | -0.31 | |||
46 | AT1G31240 | Bromodomain transcription factor | -0.52 | 0.31 | -0.32 | |||
47 | AT5G46460 | Pentatricopeptide repeat (PPR) superfamily protein | -0.52 | 0.32 | -0.31 | |||
48 | AT3G09960 | Calcineurin-like metallo-phosphoesterase superfamily protein |
0.51 | 0.29 | -0.31 | |||
49 | AT4G01190 | phosphatidylinositol phosphate kinase 10 | phosphatidylinositol phosphate kinase 10, phosphatidylinositol phosphate kinase 10 |
0.51 | 0.31 | -0.31 | ||
50 | AT3G61120 | AGAMOUS-like 13 | AGAMOUS-like 13 | 0.51 | 0.31 | -0.31 | ||
51 | AT1G47220 | Cyclin A3;3 | Cyclin A3;3 | 0.51 | 0.32 | -0.33 | ||
52 | AT3G56510 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.51 | 0.33 | -0.31 | |||
53 | AT2G14060 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.51 | 0.33 | -0.33 | |||
54 | AT1G72270 | CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
0.5 | 0.32 | -0.32 | |||
55 | AT2G29920 | unknown protein; Has 14 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.5 | 0.34 | -0.32 | |||
56 | AT5G20450 | CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink). |
0.5 | 0.32 | -0.32 | |||
57 | AT2G39850 | Subtilisin-like serine endopeptidase family protein | 0.5 | 0.3 | -0.3 | |||
58 | AT4G25590 | actin depolymerizing factor 7 | actin depolymerizing factor 7 | 0.5 | 0.33 | -0.31 | ||
59 | AT5G35430 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.5 | 0.31 | -0.33 | |||
60 | AT1G61500 | S-locus lectin protein kinase family protein | 0.49 | 0.32 | -0.32 | |||
61 | AT3G19050 | phragmoplast orienting kinesin 2 | phragmoplast orienting kinesin 2 | 0.49 | 0.33 | -0.3 | ||
62 | AT1G16290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like, catalytic (InterPro:IPR008258); Has 171 Blast hits to 155 proteins in 40 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). |
0.49 | 0.31 | -0.31 | |||
63 | AT1G77270 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits to 388 proteins in 92 species: Archae - 0; Bacteria - 31; Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). |
0.49 | 0.3 | -0.32 | |||
64 | AT5G18070 | phosphoglucosamine mutase-related | DNA-DAMAGE-REPAIR/TOLERATION 101 | -0.49 | 0.31 | -0.3 | ||
65 | ATMG00710 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
ORF120 | -0.49 | 0.32 | -0.31 | ||
66 | AT5G06400 | Pentatricopeptide repeat (PPR) superfamily protein | -0.48 | 0.3 | -0.3 | |||
67 | AT5G13970 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.48 | 0.32 | -0.31 |