AT1G13650 : -
Query Information
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AGICode AT1G13650
Description BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae - 22; Bacteria - 222; Metazoa - 684; Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes - 2392 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G13650 BEST Arabidopsis thaliana protein match is: 18S
pre-ribosomal assembly protein gar2-related
(TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in
255 species: Archae - 22; Bacteria - 222; Metazoa - 684;
Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes -
2392 (source: NCBI BLink).		 1 0.3 -0.33
2 AT1G49430 long-chain acyl-CoA synthetase 2 long-chain acyl-CoA synthetase 2,
LATERAL ROOT DEVELOPMENT 2		 0.78 0.35 -0.33
3 AT1G04750 vesicle-associated membrane protein 721 AT VAMP7B, ATVAMP721,
vesicle-associated membrane
protein 721, VESICLE-ASSOCIATED
MEMBRANE PROTEIN 7B		 -0.78 0.32 -0.29
4 AT1G28210 DNAJ heat shock family protein ATJ1 -0.77 0.32 -0.3
5 AT3G07540 Actin-binding FH2 (formin homology 2) family protein 0.77 0.3 -0.32
6 AT3G51790 transmembrane protein G1P-related 1 transmembrane protein G1P-related
1, transmembrane protein
G1P-related 1		 -0.75 0.31 -0.29
7 AT2G17130 isocitrate dehydrogenase subunit 2 isocitrate dehydrogenase II,
isocitrate dehydrogenase subunit 2		 -0.75 0.31 -0.34
8 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 -0.74 0.33 -0.29
9 AT2G17290 Calcium-dependent protein kinase family protein ARABIDOPSIS THALIANA
CALMODULIN-DOMAIN PROTEIN KINASE
3, ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
6, calcium dependent protein
kinase 6		 -0.74 0.31 -0.3
10 AT3G60450 Phosphoglycerate mutase family protein -0.74 0.3 -0.33
11 AT5G62050 homolog of yeast oxidase assembly 1 (OXA1) ARABIDOPSIS THALIANA HOMOLOG OF
YEAST OXIDASE ASSEMBLY 1 (OXA1),
homolog of yeast oxidase assembly
1 (OXA1), HOMOLOG OF YEAST OXIDASE
ASSEMBLY 1 (OXA1) IN ARABIDOPSIS
THALIANA		 -0.74 0.3 -0.29
12 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b -0.73 0.31 -0.31
13 AT3G20410 calmodulin-domain protein kinase 9 calmodulin-domain protein kinase 9 -0.73 0.32 -0.32
14 AT2G27420 Cysteine proteinases superfamily protein 0.73 0.33 -0.32
15 AT3G47430 peroxin 11B peroxin 11B 0.73 0.31 -0.32
16 AT2G24280 alpha/beta-Hydrolases superfamily protein 0.73 0.31 -0.3
17 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 -0.72 0.33 -0.31
18 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein 0.72 0.32 -0.3
19 AT5G55470 Na+/H+ (sodium hydrogen) exchanger 3 ARABIDOPSIS THALIANA NA+/H+
(SODIUM HYDROGEN) EXCHANGER 3,
Na+/H+ (sodium hydrogen) exchanger
3		 0.72 0.31 -0.3
20 AT4G28300 Protein of unknown function (DUF1421) -0.72 0.32 -0.31
21 AT1G06010 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.31 -0.33
22 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 -0.72 0.33 -0.31
23 AT5G58290 regulatory particle triple-A ATPase 3 regulatory particle triple-A
ATPase 3		 -0.72 0.34 -0.31
24 AT4G39980 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1		 -0.71 0.31 -0.31
25 AT5G42150 Glutathione S-transferase family protein -0.71 0.32 -0.31
26 AT3G11150 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.71 0.3 -0.33
27 AT4G34560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.3 -0.32
28 AT2G20900 diacylglycerol kinase 5 ATDGK5, diacylglycerol kinase 5 -0.71 0.3 -0.32
29 AT1G30890 Integral membrane HRF1 family protein -0.7 0.31 -0.32
30 AT3G53600 C2H2-type zinc finger family protein -0.7 0.32 -0.3
31 AT1G36050 Endoplasmic reticulum vesicle transporter protein -0.7 0.32 -0.33
32 AT3G16740 F-box and associated interaction domains-containing protein -0.7 0.3 -0.32
33 AT2G07510 transposable element gene 0.7 0.31 -0.3
34 AT5G58910 laccase 16 laccase 16 -0.7 0.3 -0.33
35 AT4G18010 myo-inositol polyphosphate 5-phosphatase 2 myo-inositol polyphosphate
5-phosphatase 2, myo-inositol
polyphosphate 5-phosphatase 2,
INOSITOL(1,4,5)P3 5-PHOSPHATASE II		 -0.7 0.32 -0.32
36 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.3 -0.32
37 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 0.7 0.31 -0.32
38 AT5G04170 Calcium-binding EF-hand family protein -0.7 0.31 -0.34
39 AT5G40580 20S proteasome beta subunit PBB2 20S proteasome beta subunit PBB2 -0.7 0.31 -0.32
40 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 -0.7 0.31 -0.31
41 AT3G13235 ubiquitin family protein DNA-damage inducible 1 -0.7 0.31 -0.29
42 AT3G03490 peroxin 19-1 AtPEX19-1, peroxin 19-1 -0.7 0.33 -0.32
43 AT1G03780 targeting protein for XKLP2 AtTPX2, targeting protein for
XKLP2		 0.69 0.32 -0.3
44 AT2G47970 Nuclear pore localisation protein NPL4 -0.69 0.32 -0.32
45 AT3G09810 isocitrate dehydrogenase VI isocitrate dehydrogenase VI -0.69 0.31 -0.31
46 AT2G20390 unknown protein; Has 50 Blast hits to 50 proteins in 18
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.32 -0.3
47 AT2G19930 RNA-dependent RNA polymerase family protein 0.69 0.31 -0.31
48 AT1G22200 Endoplasmic reticulum vesicle transporter protein -0.69 0.33 -0.32
49 AT2G45340 Leucine-rich repeat protein kinase family protein 0.69 0.31 -0.33
50 AT4G17060 FRIGIDA interacting protein 2 FRIGIDA interacting protein 2 -0.68 0.31 -0.31
51 AT2G47550 Plant invertase/pectin methylesterase inhibitor superfamily -0.68 0.32 -0.31
52 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 -0.68 0.33 -0.32
53 AT3G52560 ubiquitin E2 variant 1D-4 MMS2 ZWEI HOMOLOGUE 4, UBIQUITIN
E2 VARIANT 1D, ubiquitin E2
variant 1D-4		 -0.68 0.32 -0.31
54 AT5G58020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF602 (InterPro:IPR006735); Has 385 Blast
hits to 385 proteins in 189 species: Archae - 0; Bacteria -
0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0;
Other Eukaryotes - 65 (source: NCBI BLink).		 -0.68 0.3 -0.29
55 AT2G30990 Protein of unknown function (DUF688) -0.68 0.3 -0.31
56 AT1G64720 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 CP5 0.68 0.34 -0.31
57 AT4G22540 OSBP(oxysterol binding protein)-related protein 2A OSBP(oxysterol binding
protein)-related protein 2A		 0.68 0.3 -0.33
58 AT5G63700 zinc ion binding;DNA binding 0.68 0.32 -0.31
59 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 0.68 0.3 -0.31
60 AT3G43510 transposable element gene -0.68 0.3 -0.31
61 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 -0.68 0.31 -0.34
62 AT3G17410 Protein kinase superfamily protein -0.68 0.33 -0.32
63 AT5G04870 calcium dependent protein kinase 1 ATCPK1, calcium dependent protein
kinase 1		 -0.68 0.31 -0.31
64 AT4G39910 ubiquitin-specific protease 3 ubiquitin-specific protease 3,
ubiquitin-specific protease 3		 -0.68 0.34 -0.31
65 AT1G29310 SecY protein transport family protein -0.68 0.33 -0.34
66 AT4G13450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.67 0.32 -0.29
67 AT1G13260 related to ABI3/VP1 1 ETHYLENE RESPONSE DNA BINDING
FACTOR 4, related to ABI3/VP1 1		 -0.67 0.32 -0.31
68 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5		 -0.67 0.3 -0.32
69 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 -0.67 0.31 -0.28
70 AT1G23000 Heavy metal transport/detoxification superfamily protein 0.67 0.33 -0.32
71 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein -0.67 0.3 -0.33
72 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 -0.67 0.32 -0.29
73 AT2G31460 Domain of unknown function (DUF313) -0.67 0.33 -0.31
74 AT3G07760 Sterile alpha motif (SAM) domain-containing protein -0.67 0.3 -0.33
75 AT3G56930 DHHC-type zinc finger family protein -0.67 0.32 -0.31
76 AT3G16690 Nodulin MtN3 family protein AtSWEET16, SWEET16 -0.67 0.31 -0.3
77 AT5G26280 TRAF-like family protein -0.67 0.31 -0.32
78 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 -0.67 0.29 -0.31
79 AT4G39390 nucleotide sugar transporter-KT 1 A. THALIANA NUCLEOTIDE SUGAR
TRANSPORTER-KT 1, nucleotide sugar
transporter-KT 1		 -0.67 0.31 -0.31
80 AT4G05340 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.33 -0.33
81 AT2G35310 Transcriptional factor B3 family protein 0.67 0.33 -0.31
82 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 -0.67 0.3 -0.33
83 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 -0.67 0.31 -0.32
84 AT3G20920 translocation protein-related -0.66 0.32 -0.3
85 AT5G41900 alpha/beta-Hydrolases superfamily protein 0.66 0.31 -0.32
86 AT5G37480 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.32 -0.34
87 AT1G63100 GRAS family transcription factor 0.66 0.29 -0.32
88 AT2G35790 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1301 (InterPro:IPR009724); Has 116
Blast hits to 116 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses
- 0; Other Eukaryotes - 8 (source: NCBI BLink).		 -0.66 0.31 -0.31
89 AT2G43790 MAP kinase 6 MAP kinase 6, MAP kinase 6, MAP
kinase 6, MAP kinase 6		 -0.66 0.33 -0.31
90 AT1G62730 Terpenoid synthases superfamily protein -0.66 0.33 -0.33
91 AT1G53760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, membrane;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2343 (InterPro:IPR018786); Has 171
Blast hits to 171 proteins in 90 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41;
Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).		 -0.66 0.3 -0.31
92 AT1G47640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2053, membrane
(InterPro:IPR019164); Has 204 Blast hits to 204 proteins in
84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi
- 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27
(source: NCBI BLink).		 -0.66 0.31 -0.31
93 AT3G16270 ENTH/VHS family protein -0.66 0.29 -0.29
94 AT2G40640 RING/U-box superfamily protein 0.66 0.33 -0.33
95 AT2G34250 SecY protein transport family protein -0.66 0.3 -0.3
96 AT3G13050 Major facilitator superfamily protein AtNiaP, nicotinate transporter -0.66 0.31 -0.33
97 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 -0.66 0.32 -0.31
98 AT3G26480 Transducin family protein / WD-40 repeat family protein 0.66 0.32 -0.3
99 AT5G50960 nucleotide binding protein 35 NUCLEOTIDE BINDING PROTEIN 35,
nucleotide binding protein 35		 -0.66 0.32 -0.3
100 AT1G02750 Drought-responsive family protein -0.65 0.3 -0.35
101 AT1G03070 Bax inhibitor-1 family protein 0.65 0.32 -0.33
102 AT5G43170 zinc-finger protein 3 zinc-finger protein 3, zinc-finger
protein 3		 -0.65 0.32 -0.29
103 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.32
104 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.65 0.31 -0.3
105 AT2G31305 inhibitor-3 INHIBITOR-3 -0.65 0.32 -0.32
106 AT3G09570 Lung seven transmembrane receptor family protein -0.65 0.33 -0.31
107 AT1G01230 ORMDL family protein -0.65 0.32 -0.31
108 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 -0.65 0.3 -0.3
109 AT1G72360 Integrase-type DNA-binding superfamily protein AtERF73, ethylene response factor
73, HYPOXIA RESPONSIVE ERF
(ETHYLENE RESPONSE FACTOR) 1		 -0.65 0.31 -0.31
110 AT3G58300 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.65 0.32 -0.3
111 AT1G15860 Domain of unknown function (DUF298) -0.65 0.32 -0.32
112 AT5G19100 Eukaryotic aspartyl protease family protein -0.65 0.31 -0.3
113 AT4G29520 LOCATED IN: endoplasmic reticulum, plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Saposin B
(InterPro:IPR008139); Has 137 Blast hits to 137 proteins in
50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi -
10; Plants - 36; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 -0.65 0.32 -0.29
114 AT1G77310 BEST Arabidopsis thaliana protein match is:
wound-responsive family protein (TAIR:AT1G21610.1); Has 493
Blast hits to 482 proteins in 163 species: Archae - 0;
Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65;
Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink).		 0.65 0.32 -0.32
115 AT5G06410 DNAJ heat shock N-terminal domain-containing protein -0.65 0.32 -0.31
116 AT5G63220 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0363
(InterPro:IPR007317); Has 304 Blast hits to 301 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi
- 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38
(source: NCBI BLink).		 -0.65 0.32 -0.32
117 AT1G75440 ubiquitin-conjugating enzyme 16 ubiquitin-conjugating enzyme 16 -0.65 0.32 -0.31
118 AT2G20760 Clathrin light chain protein -0.65 0.3 -0.35
119 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.65 0.32 -0.33
120 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.65 0.31 -0.31
121 AT2G03310 unknown protein; Has 17 Blast hits to 17 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.32 -0.31
122 AT1G60690 NAD(P)-linked oxidoreductase superfamily protein 0.64 0.3 -0.29
123 AT3G30460 RING/U-box superfamily protein 0.64 0.3 -0.32
124 AT1G16070 tubby like protein 8 tubby like protein 8, tubby like
protein 8		 0.64 0.32 -0.31
125 AT5G25610 BURP domain-containing protein ATRD22, RESPONSIVE TO DESSICATION
22		 0.64 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.81 0.45 -0.46 C0016
127 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - -0.72 0.45 -0.46 C0023
128 C0160 MST_1509.5 - - - -0.69 0.46 -0.44
129 C0161 MST_1566.3 - - - -0.68 0.44 -0.45
130 C0163 MST_1589.2 - - - -0.65 0.43 -0.48