AT1G16830 : -
Query Information
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AGICode AT1G16830
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.32
2 AT5G26180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.77 0.3 -0.31
3 AT2G20740 Tetraspanin family protein -0.76 0.35 -0.31
4 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.74 0.33 -0.3
5 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.32 -0.33
6 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein 0.72 0.31 -0.32
7 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.29 -0.31
8 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.72 0.33 -0.32
9 AT1G17790 DNA-binding bromodomain-containing protein -0.72 0.31 -0.31
10 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.3 -0.31
11 AT5G66960 Prolyl oligopeptidase family protein 0.69 0.32 -0.31
12 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.32 -0.32
13 AT2G30090 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.69 0.34 -0.31
14 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 -0.68 0.3 -0.32
15 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 -0.68 0.3 -0.32
16 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.68 0.3 -0.33
17 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.3 -0.32
18 AT2G23480 transposable element gene -0.68 0.31 -0.3
19 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.68 0.33 -0.32
20 AT3G13980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits
to 418 proteins in 98 species: Archae - 0; Bacteria - 6;
Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other
Eukaryotes - 1059 (source: NCBI BLink).		 -0.67 0.32 -0.31
21 AT4G33810 Glycosyl hydrolase superfamily protein -0.67 0.32 -0.32
22 AT3G18230 Octicosapeptide/Phox/Bem1p family protein 0.67 0.31 -0.31
23 AT5G54260 DNA repair and meiosis protein (Mre11) ARABIDOPSIS MEIOTIC RECOMBINATION
11, MEIOTIC RECOMBINATION 11		 0.67 0.28 -0.3
24 AT5G25160 zinc finger protein 3 zinc finger protein 3 0.67 0.31 -0.33
25 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO 0.66 0.33 -0.31
26 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.3 -0.32
27 AT1G26290 unknown protein; Has 126 Blast hits to 112 proteins in 36
species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 3;
Plants - 14; Viruses - 0; Other Eukaryotes - 89 (source:
NCBI BLink).		 -0.66 0.34 -0.32
28 AT3G22070 proline-rich family protein -0.66 0.34 -0.32
29 AT5G17440 LUC7 related protein 0.66 0.32 -0.32
30 AT1G48040 Protein phosphatase 2C family protein 0.66 0.32 -0.33
31 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.32 -0.3
32 AT2G44230 Plant protein of unknown function (DUF946) -0.65 0.3 -0.3
33 AT5G08600 U3 ribonucleoprotein (Utp) family protein 0.65 0.33 -0.34
34 AT5G49750 Leucine-rich repeat (LRR) family protein -0.65 0.31 -0.32
35 AT1G12030 Protein of unknown function (DUF506) -0.65 0.31 -0.3
36 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 0.65 0.3 -0.31
37 AT2G46070 mitogen-activated protein kinase 12 ATMPK12, MAPK12, mitogen-activated
protein kinase 12		 -0.64 0.29 -0.32
38 AT5G25820 Exostosin family protein 0.64 0.31 -0.3
39 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 -0.64 0.33 -0.31
40 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.64 0.31 -0.33
41 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 -0.64 0.33 -0.31
42 AT3G51500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.64 0.33 -0.3
43 AT3G57680 Peptidase S41 family protein -0.64 0.32 -0.32
44 AT5G19580 glyoxal oxidase-related protein -0.64 0.32 -0.32
45 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 -0.63 0.3 -0.32
46 AT3G56240 copper chaperone copper chaperone -0.63 0.32 -0.3
47 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 0.63 0.3 -0.3
48 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.63 0.33 -0.31
49 AT2G25580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.31 -0.31
50 AT3G50780 BEST Arabidopsis thaliana protein match is: BTB/POZ
domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast
hits to 298 proteins in 22 species: Archae - 0; Bacteria -
0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink).		 -0.63 0.3 -0.32
51 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.63 0.3 -0.33
52 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.63 0.32 -0.31
53 AT5G02350 Cysteine/Histidine-rich C1 domain family protein 0.62 0.32 -0.34
54 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.62 0.3 -0.31
55 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 0.62 0.33 -0.3
56 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 -0.62 0.31 -0.31
57 AT5G14860 UDP-Glycosyltransferase superfamily protein -0.62 0.3 -0.3
58 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.29 -0.3
59 AT3G10760 Homeodomain-like superfamily protein -0.62 0.35 -0.32
60 AT1G23070 Protein of unknown function (DUF300) -0.62 0.32 -0.31
61 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 0.62 0.31 -0.32
62 AT2G06170 transposable element gene 0.62 0.32 -0.3
63 AT2G26120 glycine-rich protein 0.62 0.32 -0.33
64 AT5G23000 myb domain protein 37 ATMYB37, myb domain protein 37,
REGULATOR OF AXILLARY MERISTEMS 1		 0.61 0.31 -0.3
65 AT4G14660 RNA polymerase Rpb7-like, N-terminal domain NRPE7 0.61 0.31 -0.32
66 AT2G09840 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT2G06904.1); Has 10 Blast
hits to 10 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.33
67 AT2G17300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast
hits to 42 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.32
68 AT2G23890 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 0.61 0.3 -0.33
69 AT1G69210 Uncharacterised protein family UPF0090 0.61 0.31 -0.32
70 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 -0.61 0.29 -0.32
71 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 -0.61 0.3 -0.32
72 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.61 0.32 -0.32
73 AT5G48200 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.29 -0.3
74 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 -0.61 0.35 -0.29
75 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.29 -0.33
76 AT1G03470 Kinase interacting (KIP1-like) family protein -0.6 0.29 -0.34
77 AT1G64690 branchless trichome BRANCHLESS TRICHOMES -0.6 0.31 -0.28
78 AT2G15695 Protein of unknown function DUF829, transmembrane 53 -0.6 0.31 -0.3
79 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 -0.6 0.31 -0.32
80 AT3G47640 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 POPEYE -0.6 0.31 -0.32
81 AT1G26970 Protein kinase superfamily protein -0.6 0.33 -0.32
82 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 -0.59 0.32 -0.3
83 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.59 0.29 -0.33
84 AT3G53350 ROP interactive partner 4 ROP interactive partner 4 -0.59 0.3 -0.32
85 AT3G22940 F-box associated ubiquitination effector family protein -0.59 0.3 -0.34
86 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.33 -0.3
87 AT4G16830 Hyaluronan / mRNA binding family -0.58 0.3 -0.32
88 AT5G18120 APR-like 7 APR-like 7, APR-like 7 -0.58 0.33 -0.29
89 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor -0.58 0.33 -0.31
90 AT1G51690 protein phosphatase 2A 55 kDa regulatory subunit B alpha
isoform		 protein phosphatase 2A 55 kDa
regulatory subunit B alpha
isoform, protein phosphatase 2A 55
kDa regulatory subunit B alpha
isoform		 -0.58 0.32 -0.34
91 AT5G28860 transposable element gene -0.57 0.32 -0.31
92 AT5G45640 Subtilisin-like serine endopeptidase family protein -0.57 0.32 -0.31
93 AT4G00230 xylem serine peptidase 1 xylem serine peptidase 1 -0.57 0.29 -0.32
94 AT3G06110 MAPK phosphatase 2 ARABIDOPSIS MAPK PHOSPHATASE 2,
DUAL-SPECIFICITY PROTEIN
PHOSPHATASE 1B, MAPK phosphatase 2		 -0.57 0.31 -0.32
95 AT3G50150 Plant protein of unknown function (DUF247) -0.57 0.3 -0.34