AT1G16920 : RAB GTPase homolog A1B
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G16920
Description RAB GTPase homolog A1B
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G16920 RAB GTPase homolog A1B RAB GTPase homolog A1B, RAB11, RAB
GTPase homolog A1B		 1 0.32 -0.33
2 AT5G20280 sucrose phosphate synthase 1F sucrose phosphate synthase 1F,
sucrose phosphate synthase 1F,
sucrose-phosphate synthase A1		 -0.85 0.28 -0.32
3 AT2G37190 Ribosomal protein L11 family protein 0.83 0.31 -0.33
4 AT3G23805 ralf-like 24 ralf-like 24 0.83 0.32 -0.31
5 AT3G52580 Ribosomal protein S11 family protein 0.82 0.32 -0.31
6 AT5G57700 BNR/Asp-box repeat family protein 0.82 0.3 -0.31
7 AT1G02640 beta-xylosidase 2 BETA-XYLOSIDASE 2, beta-xylosidase
2		 0.82 0.31 -0.31
8 AT3G07700 Protein kinase superfamily protein -0.82 0.31 -0.31
9 AT1G48370 YELLOW STRIPE like 8 YELLOW STRIPE like 8 -0.81 0.32 -0.33
10 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein -0.81 0.31 -0.3
11 AT3G61960 Protein kinase superfamily protein -0.8 0.31 -0.31
12 AT3G04920 Ribosomal protein S24e family protein 0.79 0.32 -0.32
13 AT5G43700 AUX/IAA transcriptional regulator family protein AUXIN INDUCIBLE 2-11,
indole-3-acetic acid inducible 4		 0.79 0.32 -0.32
14 AT3G50760 galacturonosyltransferase-like 2 galacturonosyltransferase-like 2 -0.79 0.31 -0.3
15 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11		 0.79 0.34 -0.33
16 AT2G39050 hydroxyproline-rich glycoprotein family protein ArathEULS3, Euonymus lectin S3 -0.78 0.33 -0.32
17 AT1G67300 Major facilitator superfamily protein -0.78 0.31 -0.3
18 AT5G63670 SPT4 homolog 2 SPT4 homolog 2 0.78 0.31 -0.33
19 AT1G03080 kinase interacting (KIP1-like) family protein -0.78 0.32 -0.31
20 AT3G07580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48335.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.78 0.32 -0.33
21 AT5G66920 SKU5 similar 17 SKU5 similar 17 0.78 0.31 -0.34
22 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 0.78 0.32 -0.32
23 AT2G27130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.78 0.31 -0.32
24 AT1G80560 isopropylmalate dehydrogenase 2 ARABIDOPSIS ISOPROPYLMALATE
DEHYDROGENASE 2, isopropylmalate
dehydrogenase 2		 0.77 0.35 -0.31
25 AT2G22010 related to KPC1 related to KPC1 -0.77 0.3 -0.3
26 AT5G66230 Chalcone-flavanone isomerase family protein 0.77 0.3 -0.32
27 AT1G71140 MATE efflux family protein -0.77 0.31 -0.32
28 AT5G17860 calcium exchanger 7 calcium exchanger 7 -0.77 0.32 -0.32
29 AT2G18400 ribosomal protein L6 family protein 0.77 0.31 -0.32
30 AT4G15490 UDP-Glycosyltransferase superfamily protein UGT84A3 -0.77 0.32 -0.31
31 AT4G22980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits
to 468 proteins in 130 species: Archae - 5; Bacteria - 23;
Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 -0.77 0.31 -0.32
32 AT5G15520 Ribosomal protein S19e family protein 0.76 0.31 -0.31
33 AT3G07270 GTP cyclohydrolase I 0.76 0.3 -0.31
34 AT4G26840 small ubiquitin-like modifier 1 ARABIDOPSIS THALIANA SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, small
ubiquitin-like modifier 1		 0.76 0.31 -0.32
35 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.76 0.3 -0.32
36 AT3G23880 F-box and associated interaction domains-containing protein 0.76 0.32 -0.3
37 AT3G02790 zinc finger (C2H2 type) family protein 0.76 0.33 -0.32
38 AT4G27830 beta glucosidase 10 beta glucosidase 10 -0.76 0.33 -0.3
39 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.76 0.32 -0.33
40 AT1G70985 hydroxyproline-rich glycoprotein family protein 0.76 0.29 -0.3
41 AT3G16940 calmodulin binding;transcription regulators -0.75 0.32 -0.35
42 AT1G18470 Transmembrane Fragile-X-F-associated protein -0.75 0.34 -0.31
43 AT5G52810 NAD(P)-binding Rossmann-fold superfamily protein -0.75 0.32 -0.32
44 AT5G58480 O-Glycosyl hydrolases family 17 protein 0.75 0.32 -0.3
45 AT3G57080 Eukaryotic rpb5 RNA polymerase subunit family protein NRPE5, RNA POLYMERASE II FIFTH
LARGEST SUBUNIT, B		 0.75 0.32 -0.31
46 AT5G39040 transporter associated with antigen processing protein 2 ATP-binding cassette B27, ALUMINUM
SENSITIVE 1, AtALS1, ARABIDOPSIS
THALIANA TRANSPORTER ASSOCIATED
WITH ANTIGEN PROCESSING PROTEIN 2,
transporter associated with
antigen processing protein 2		 -0.75 0.33 -0.33
47 AT5G16870 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.75 0.32 -0.3
48 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase -0.75 0.32 -0.3
49 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.75 0.33 -0.31
50 AT5G27700 Ribosomal protein S21e 0.75 0.29 -0.33
51 AT2G42110 unknown protein; Has 27 Blast hits to 27 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.75 0.3 -0.31
52 AT3G14205 Phosphoinositide phosphatase family protein -0.74 0.3 -0.31
53 AT2G42010 phospholipase D beta 1 PLDBETA, phospholipase D beta 1 -0.74 0.3 -0.32
54 AT5G19340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits
to 906 proteins in 61 species: Archae - 0; Bacteria - 4;
Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other
Eukaryotes - 766 (source: NCBI BLink).		 0.74 0.35 -0.31
55 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 -0.74 0.31 -0.31
56 AT1G71790 Subunits of heterodimeric actin filament capping protein
Capz superfamily		 0.74 0.32 -0.32
57 AT4G12300 cytochrome P450, family 706, subfamily A, polypeptide 4 cytochrome P450, family 706,
subfamily A, polypeptide 4		 -0.74 0.34 -0.32
58 AT2G38465 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; Has 16 Blast hits to 16 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.74 0.33 -0.32
59 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.74 0.32 -0.31
60 AT1G79610 Na+/H+ antiporter 6 ARABIDOPSIS NA+/H+ ANTIPORTER 6,
Na+/H+ antiporter 6		 -0.74 0.32 -0.3
61 AT2G32830 phosphate transporter 1;5 phosphate transporter 1;5,
PHOSPHATE TRANSPORTER 5		 -0.74 0.3 -0.31
62 AT5G63140 purple acid phosphatase 29 purple acid phosphatase 29, PAP29,
purple acid phosphatase 29		 0.74 0.31 -0.3
63 AT1G32960 Subtilase family protein ATSBT3.3, SBT3.3 -0.73 0.31 -0.32
64 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.73 0.31 -0.31
65 AT3G18210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.73 0.31 -0.3
66 AT1G34420 leucine-rich repeat transmembrane protein kinase family
protein		 -0.73 0.31 -0.29
67 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 0.73 0.3 -0.3
68 AT2G38810 histone H2A 8 histone H2A 8 0.73 0.31 -0.34
69 AT4G31840 early nodulin-like protein 15 AtENODL15, early nodulin-like
protein 15		 0.73 0.3 -0.33
70 AT5G55260 protein phosphatase X 2 PROTEIN PHOSPHATASE X -2, protein
phosphatase X 2		 0.73 0.33 -0.3
71 AT1G50490 ubiquitin-conjugating enzyme 20 ubiquitin-conjugating enzyme 20 0.73 0.33 -0.34
72 AT5G13200 GRAM domain family protein -0.73 0.34 -0.32
73 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 0.73 0.3 -0.3
74 AT3G12710 DNA glycosylase superfamily protein 0.73 0.32 -0.32
75 AT1G47290 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 1,
3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 1		 0.73 0.31 -0.32
76 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.73 0.29 -0.33
77 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.73 0.32 -0.34
78 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.73 0.3 -0.31
79 AT1G13380 Protein of unknown function (DUF1218) 0.73 0.32 -0.3
80 AT1G49860 glutathione S-transferase (class phi) 14 glutathione S-transferase (class
phi) 14, glutathione S-transferase
(class phi) 14		 0.73 0.33 -0.31
81 AT5G33290 xylogalacturonan deficient 1 xylogalacturonan deficient 1 -0.73 0.34 -0.31
82 AT3G55270 mitogen-activated protein kinase phosphatase 1 ARABIDOPSIS MITOGEN-ACTIVATED
PROTEIN KINASE PHOSPHATASE 1,
mitogen-activated protein kinase
phosphatase 1		 -0.73 0.34 -0.34
83 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 0.72 0.31 -0.32
84 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.31 -0.3
85 AT3G62370 heme binding 0.72 0.3 -0.32
86 AT1G21840 urease accessory protein F urease accessory protein F 0.72 0.3 -0.33
87 AT1G04780 Ankyrin repeat family protein -0.72 0.34 -0.3
88 AT5G01910 unknown protein; Has 66 Blast hits to 66 proteins in 27
species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7;
Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.72 0.3 -0.34
89 AT5G20640 Protein of unknown function (DUF567) 0.72 0.3 -0.32
90 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 -0.72 0.34 -0.33
91 AT1G69530 expansin A1 AT-EXP1, ATEXP1, expansin A1,
ATHEXP ALPHA 1.2, EXPANSIN 1,
expansin A1		 0.72 0.32 -0.33
92 AT1G56650 production of anthocyanin pigment 1 MYB DOMAIN PROTEIN 75,
MYELOBLASTOSIS PROTEIN 75,
production of anthocyanin pigment
1, SUC-INDUCED ANTHOCYANIN
ACCUMULATION 1		 -0.72 0.31 -0.32
93 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.72 0.3 -0.31
94 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 -0.72 0.31 -0.3
95 AT1G29980 Protein of unknown function, DUF642 0.72 0.33 -0.31
96 AT2G47180 galactinol synthase 1 galactinol synthase 1, galactinol
synthase 1		 -0.72 0.31 -0.32
97 AT4G29870 Oligosaccharyltransferase complex/magnesium transporter
family protein		 0.72 0.32 -0.33
98 AT5G02440 unknown protein; Has 71 Blast hits to 71 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.29
99 AT5G18060 SAUR-like auxin-responsive protein family 0.72 0.31 -0.32
100 AT1G16540 molybdenum cofactor sulfurase (LOS5) (ABA3) ABA DEFICIENT 3, ALTERED
CHLOROPLAST IMPORT 2, ATABA3, LOW
OSMOTIC STRESS 5, SIRTINOL
RESISTANT 3		 -0.71 0.3 -0.32
101 AT3G47060 FTSH protease 7 FTSH protease 7 -0.71 0.3 -0.32
102 AT2G26780 ARM repeat superfamily protein -0.71 0.33 -0.32
103 AT2G37580 RING/U-box superfamily protein -0.71 0.32 -0.32
104 AT5G64510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 tunicamycin induced 1 -0.71 0.31 -0.3
105 AT4G30460 glycine-rich protein -0.7 0.31 -0.31
106 AT1G15130 Endosomal targeting BRO1-like domain-containing protein -0.7 0.31 -0.32
107 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 -0.7 0.29 -0.3
108 AT4G34230 cinnamyl alcohol dehydrogenase 5 cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5		 -0.7 0.32 -0.32
109 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.7 0.3 -0.3
110 AT2G04350 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 8 -0.7 0.33 -0.32
111 AT3G22550 Protein of unknown function (DUF581) -0.7 0.32 -0.3
112 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.7 0.33 -0.31
113 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.7 0.33 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0014 O-Acetylserine O-Acetyl-L-serine O-Acetyl-L-serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		-0.7 0.3 -0.31 C0014