AT1G30200 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G30200
Description F-box family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G30200 F-box family protein 1 0.33 -0.28
2 AT5G18630 alpha/beta-Hydrolases superfamily protein 0.79 0.31 -0.31
3 AT5G16040 Regulator of chromosome condensation (RCC1) family protein -0.74 0.29 -0.31
4 AT1G60560 SWIM zinc finger family protein -0.72 0.33 -0.31
5 AT5G10630 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.71 0.3 -0.31
6 AT3G53950 glyoxal oxidase-related protein 0.71 0.31 -0.32
7 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.3 -0.3
8 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12		 0.71 0.33 -0.32
9 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.33 -0.31
10 AT2G25355 PNAS-3 related -0.7 0.32 -0.3
11 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 -0.69 0.34 -0.34
12 AT3G09440 Heat shock protein 70 (Hsp 70) family protein -0.69 0.33 -0.31
13 AT3G15460 Ribosomal RNA processing Brix domain protein -0.69 0.32 -0.3
14 AT5G02490 Heat shock protein 70 (Hsp 70) family protein AtHsp70-2, Hsp70-2 -0.69 0.3 -0.34
15 AT3G52060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.69 0.31 -0.33
16 AT5G16380 Protein of unknown function, DUF538 -0.69 0.33 -0.33
17 AT3G62310 RNA helicase family protein -0.68 0.31 -0.32
18 AT1G06470 Nucleotide/sugar transporter family protein -0.67 0.3 -0.3
19 AT5G10900 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.67 0.31 -0.31
20 AT5G37930 Protein with RING/U-box and TRAF-like domains 0.67 0.32 -0.33
21 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.67 0.33 -0.31
22 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 0.67 0.34 -0.31
23 AT5G05210 Surfeit locus protein 6 -0.66 0.31 -0.31
24 AT2G40420 Transmembrane amino acid transporter family protein 0.66 0.32 -0.31
25 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 0.66 0.31 -0.33
26 AT3G09470 Major facilitator superfamily protein 0.66 0.3 -0.31
27 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 -0.66 0.3 -0.31
28 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.33
29 AT2G21520 Sec14p-like phosphatidylinositol transfer family protein -0.66 0.3 -0.31
30 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 -0.66 0.32 -0.32
31 AT1G72320 pumilio 23 pumilio 23, pumilio 23 -0.66 0.31 -0.34
32 AT3G16810 pumilio 24 pumilio 24, pumilio 24 -0.66 0.31 -0.3
33 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 -0.66 0.3 -0.31
34 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 0.65 0.3 -0.33
35 AT5G19120 Eukaryotic aspartyl protease family protein 0.65 0.3 -0.31
36 AT1G67500 recovery protein 3 recovery protein 3, recovery
protein 3		 0.65 0.3 -0.34
37 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 -0.65 0.31 -0.32
38 AT5G54910 DEA(D/H)-box RNA helicase family protein -0.65 0.3 -0.31
39 AT1G51610 Cation efflux family protein -0.65 0.33 -0.34
40 AT1G06380 Ribosomal protein L1p/L10e family -0.65 0.3 -0.33
41 AT4G20890 tubulin beta-9 chain tubulin beta-9 chain -0.65 0.3 -0.3
42 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein -0.65 0.34 -0.31
43 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.65 0.31 -0.32
44 AT2G01170 bidirectional amino acid transporter 1 bidirectional amino acid
transporter 1		 -0.65 0.3 -0.32
45 AT3G43590 zinc knuckle (CCHC-type) family protein -0.65 0.32 -0.31
46 AT2G16500 arginine decarboxylase 1 arginine decarboxylase 1, ARGDC,
ARGDC1, SPE1		 -0.65 0.3 -0.32
47 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 -0.65 0.3 -0.33
48 AT5G28150 Plant protein of unknown function (DUF868) -0.65 0.31 -0.31
49 AT1G66080 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF775 (InterPro:IPR008493); Has 285 Blast
hits to 283 proteins in 133 species: Archae - 0; Bacteria -
0; Metazoa - 120; Fungi - 88; Plants - 50; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 -0.65 0.3 -0.33
50 AT1G65000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits
to 49 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.31 -0.29
51 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 0.64 0.31 -0.33
52 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.34 -0.3
53 AT1G09350 galactinol synthase 3 galactinol synthase 3, galactinol
synthase 3		 -0.64 0.31 -0.32
54 AT2G15230 lipase 1 lipase 1, lipase 1 0.64 0.33 -0.31
55 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 0.64 0.34 -0.32
56 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 -0.64 0.33 -0.31
57 AT1G71710 DNAse I-like superfamily protein -0.64 0.3 -0.32
58 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 0.64 0.3 -0.31
59 AT4G21720 unknown protein; Has 2692 Blast hits to 975 proteins in 186
species: Archae - 4; Bacteria - 460; Metazoa - 658; Fungi -
93; Plants - 1089; Viruses - 100; Other Eukaryotes - 288
(source: NCBI BLink).		 -0.64 0.31 -0.33
60 AT4G35310 calmodulin-domain protein kinase 5 ATCPK5, calmodulin-domain protein
kinase 5		 -0.64 0.34 -0.33
61 AT1G51600 ZIM-LIKE 2 GATA TRANSCRIPTION FACTOR 28,
TIFY2A, ZIM-LIKE 2		 -0.64 0.31 -0.32
62 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.64 0.31 -0.28
63 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.32 -0.3
64 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 -0.63 0.32 -0.31
65 AT1G62740 stress-inducible protein, putative Hop2 -0.63 0.3 -0.33
66 AT5G01410 Aldolase-type TIM barrel family protein ATPDX1, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.3, PDX1,
PYRIDOXINE BIOSYNTHESIS 1.3,
REDUCED SUGAR RESPONSE 4		 -0.63 0.31 -0.32
67 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF -0.63 0.3 -0.3
68 AT2G30160 Mitochondrial substrate carrier family protein -0.63 0.3 -0.33
69 AT5G41190 CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)
Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA
nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.32 -0.33
70 AT3G50880 DNA glycosylase superfamily protein 0.63 0.33 -0.32
71 AT4G03180 CONTAINS InterPro DOMAIN/s: rRNA processing
(InterPro:IPR013730); Has 898 Blast hits to 687 proteins in
142 species: Archae - 2; Bacteria - 28; Metazoa - 200;
Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes -
506 (source: NCBI BLink).		 -0.63 0.34 -0.33
72 AT1G55820 Kinase-related protein of unknown function (DUF1296) -0.63 0.32 -0.32
73 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein -0.63 0.3 -0.32
74 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.31 -0.32
75 AT4G12750 Homeodomain-like transcriptional regulator -0.62 0.31 -0.33
76 AT2G28590 Protein kinase superfamily protein -0.62 0.3 -0.31
77 AT3G42670 chromatin remodeling 38 chromatin remodeling 38, CLASSY1,
CLASSY 1		 -0.62 0.31 -0.33
78 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain		 -0.62 0.32 -0.32
79 AT1G17130 Family of unknown function (DUF572) -0.62 0.31 -0.32
80 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 -0.62 0.31 -0.31
81 AT5G13470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.31 -0.3
82 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 -0.62 0.32 -0.33
83 AT2G18900 Transducin/WD40 repeat-like superfamily protein -0.62 0.3 -0.31
84 AT2G39570 ACT domain-containing protein ACT domain repeats 9 0.62 0.33 -0.31
85 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.34 -0.3
86 AT5G63770 diacylglycerol kinase 2 diacylglycerol kinase 2,
diacylglycerol kinase 2		 -0.61 0.3 -0.31
87 AT1G04900 Protein of unknown function (DUF185) -0.61 0.32 -0.33
88 AT3G49725 GTP-binding protein, HflX -0.61 0.33 -0.33
89 AT1G25250 indeterminate(ID)-domain 16 indeterminate(ID)-domain 16,
indeterminate(ID)-domain 16		 -0.61 0.3 -0.33
90 AT3G44110 DNAJ homologue 3 ATJ, DNAJ homologue 3, J3 -0.61 0.32 -0.33
91 AT3G09000 proline-rich family protein 0.61 0.3 -0.33
92 AT3G20440 Alpha amylase family protein BRANCHING ENZYME 1, EMBRYO
DEFECTIVE 2729		 -0.61 0.3 -0.33
93 AT2G40430 CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687),
Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has
709 Blast hits to 643 proteins in 201 species: Archae - 0;
Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45;
Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).		 -0.61 0.3 -0.31
94 AT1G06000 UDP-Glycosyltransferase superfamily protein -0.61 0.32 -0.31
95 AT4G17090 chloroplast beta-amylase BETA-AMYLASE 3, BETA-AMYLASE 8,
chloroplast beta-amylase		 -0.61 0.3 -0.31
96 AT2G40780 Nucleic acid-binding, OB-fold-like protein -0.61 0.3 -0.3
97 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 -0.6 0.29 -0.32
98 AT5G48970 Mitochondrial substrate carrier family protein -0.6 0.31 -0.33
99 AT1G02330 CONTAINS InterPro DOMAIN/s: Hepatocellular
carcinoma-associated antigen 59 (InterPro:IPR010756); Has
1239 Blast hits to 998 proteins in 204 species: Archae - 4;
Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87;
Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).		 -0.6 0.31 -0.31
100 AT1G53720 cyclophilin 59 CYCLOPHILIN 59, cyclophilin 59 -0.6 0.31 -0.31
101 AT1G59600 ZCW7 ZCW7 -0.6 0.32 -0.32
102 AT3G13450 Transketolase family protein DARK INDUCIBLE 4 0.6 0.32 -0.31
103 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.6 0.33 -0.3
104 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.6 0.31 -0.31
105 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 -0.6 0.31 -0.32
106 AT1G03905 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette I19 -0.6 0.31 -0.3
107 AT1G43580 Sphingomyelin synthetase family protein 0.6 0.33 -0.33
108 AT5G23080 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 TOUGH 0.6 0.31 -0.32
109 AT5G50840 CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.6 0.33 -0.31
110 AT1G06670 nuclear DEIH-boxhelicase nuclear DEIH-boxhelicase -0.6 0.31 -0.31
111 AT5G41080 PLC-like phosphodiesterases superfamily protein AtGDPD2, glycerophosphodiester
phosphodiesterase 2		 0.59 0.29 -0.3
112 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 0.59 0.29 -0.31
113 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E 0.59 0.31 -0.34
114 AT3G26510 Octicosapeptide/Phox/Bem1p family protein 0.59 0.35 -0.33
115 AT3G22220 hAT transposon superfamily 0.58 0.32 -0.32
116 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.58 0.31 -0.31
117 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 0.58 0.32 -0.32
118 AT1G49740 PLC-like phosphodiesterases superfamily protein 0.58 0.33 -0.31
119 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 0.58 0.29 -0.32
120 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.58 0.3 -0.32
121 AT1G11360 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.58 0.33 -0.33
122 AT5G10710 INVOLVED IN: chromosome segregation, cell division; LOCATED
IN: chromosome, centromeric region, nucleus; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O
(InterPro:IPR018464); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.57 0.33 -0.34
123 AT1G11270 F-box and associated interaction domains-containing protein 0.57 0.3 -0.33
124 AT1G55290 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.57 0.33 -0.34
125 AT1G29570 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.56 0.31 -0.31
126 AT5G63190 MA3 domain-containing protein 0.56 0.29 -0.3
127 AT5G16560 Homeodomain-like superfamily protein KANADI, KANADI 1 0.56 0.29 -0.31
128 AT1G61100 disease resistance protein (TIR class), putative 0.56 0.32 -0.3
129 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.55 0.32 -0.32
130 AT5G40020 Pathogenesis-related thaumatin superfamily protein 0.54 0.34 -0.34
131 AT1G44810 DNA-binding storekeeper protein-related transcriptional
regulator		 0.54 0.32 -0.31
132 AT5G07780 Actin-binding FH2 (formin homology 2) family protein 0.54 0.31 -0.33
133 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 0.54 0.32 -0.3