AT1G50840 : polymerase gamma 2
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G50840
Description polymerase gamma 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G50840 polymerase gamma 2 polymerase gamma 2, polymerase I A 1 0.32 -0.31
2 AT1G64430 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.31
3 AT5G27730 Protein of unknown function (DUF1624) 0.75 0.3 -0.32
4 AT1G05230 homeodomain GLABROUS 2 homeodomain GLABROUS 2 0.75 0.31 -0.32
5 AT1G10910 Pentatricopeptide repeat (PPR) superfamily protein EMBRYO DEFECTIVE 3103 0.74 0.32 -0.3
6 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 0.73 0.31 -0.29
7 AT4G18290 potassium channel in Arabidopsis thaliana 2 potassium channel in Arabidopsis
thaliana 2		 0.73 0.32 -0.3
8 ATCG00480 ATP synthase subunit beta ATP synthase subunit beta, ATP
synthase subunit beta		 0.72 0.3 -0.33
9 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.72 0.33 -0.34
10 AT3G26085 CAAX amino terminal protease family protein 0.71 0.31 -0.34
11 AT4G14510 CRM family member 3B ATCFM3B, CRM family member 3B 0.71 0.3 -0.31
12 AT1G01320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.3 -0.31
13 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.69 0.31 -0.32
14 AT1G66840 Plant protein of unknown function (DUF827) plastid movement impaired 2, WEAK
CHLOROPLAST MOVEMENT UNDER BLUE
LIGHT 2		 0.69 0.31 -0.3
15 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 0.69 0.31 -0.3
16 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 0.69 0.32 -0.33
17 AT1G28090 Polynucleotide adenylyltransferase family protein 0.67 0.33 -0.31
18 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 -0.67 0.31 -0.3
19 ATCG00630 PSAJ PSAJ 0.66 0.34 -0.3
20 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.66 0.33 -0.31
21 AT1G65070 DNA mismatch repair protein MutS, type 2 0.66 0.31 -0.31
22 AT1G15290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.3 -0.32
23 AT4G02260 RELA/SPOT homolog 1 RELA-SPOT HOMOLOG 1, RELA/SPOT
HOMOLOG 1, RELA/SPOT homolog 1		 0.66 0.33 -0.3
24 ATCG01040 Cytochrome C assembly protein YCF5 0.65 0.34 -0.31
25 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.65 0.31 -0.33
26 AT1G15960 NRAMP metal ion transporter 6 ATNRAMP6, NRAMP metal ion
transporter 6		 0.65 0.32 -0.33
27 AT2G32640 Lycopene beta/epsilon cyclase protein 0.65 0.33 -0.28
28 AT3G15300 VQ motif-containing protein -0.64 0.32 -0.29
29 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.64 0.31 -0.28
30 AT3G49050 alpha/beta-Hydrolases superfamily protein 0.63 0.32 -0.33
31 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.63 0.31 -0.29
32 AT5G59040 copper transporter 3 copper transporter 3 0.63 0.31 -0.33
33 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.63 0.34 -0.34
34 AT1G78010 tRNA modification GTPase, putative 0.63 0.32 -0.31
35 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 0.63 0.3 -0.36
36 AT2G26290 root-specific kinase 1 root-specific kinase 1 -0.63 0.31 -0.3
37 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 -0.61 0.31 -0.33
38 AT1G26820 ribonuclease 3 ribonuclease 3 -0.61 0.3 -0.33
39 AT5G23220 nicotinamidase 3 nicotinamidase 3 -0.61 0.31 -0.33
40 AT3G17090 Protein phosphatase 2C family protein -0.61 0.31 -0.29
41 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.6 0.33 -0.29
42 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.6 0.32 -0.32
43 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.6 0.31 -0.3
44 AT1G12160 Flavin-binding monooxygenase family protein -0.6 0.28 -0.32
45 AT3G20840 Integrase-type DNA-binding superfamily protein PLETHORA 1 -0.59 0.31 -0.3
46 AT1G73340 Cytochrome P450 superfamily protein -0.58 0.32 -0.31
47 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 -0.58 0.29 -0.32
48 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.58 0.32 -0.32
49 AT3G19390 Granulin repeat cysteine protease family protein -0.58 0.32 -0.33
50 AT2G19580 tetraspanin2 tetraspanin2 -0.57 0.3 -0.32
51 AT4G03810 transposable element gene -0.57 0.33 -0.33
52 AT4G15120 VQ motif-containing protein -0.57 0.32 -0.3
53 AT5G43690 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.3 -0.31
54 AT1G18690 Galactosyl transferase GMA12/MNN10 family protein -0.56 0.3 -0.34
55 AT3G12090 tetraspanin6 tetraspanin6 -0.56 0.32 -0.31
56 AT3G49380 IQ-domain 15 IQ-domain 15 -0.55 0.33 -0.32
57 AT2G37120 S1FA-like DNA-binding protein -0.55 0.31 -0.33
58 AT1G56020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits
to 958 proteins in 192 species: Archae - 0; Bacteria - 193;
Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8;
Other Eukaryotes - 1887 (source: NCBI BLink).		 -0.55 0.29 -0.32
59 AT1G51190 Integrase-type DNA-binding superfamily protein PLETHORA 2 -0.55 0.31 -0.31
60 AT4G22320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits
to 5363 proteins in 542 species: Archae - 33; Bacteria -
806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses -
151; Other Eukaryotes - 4399 (source: NCBI BLink).		 -0.55 0.33 -0.32
61 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.31 -0.31
62 AT3G21680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root, flower,
stamen; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 34 Blast hits to 34 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.32 -0.32
63 AT2G25640 SPOC domain / Transcription elongation factor S-II protein -0.54 0.33 -0.28
64 AT3G20710 F-box family protein -0.54 0.32 -0.3
65 AT5G27510 Protein kinase superfamily protein -0.53 0.32 -0.32
66 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 -0.53 0.31 -0.31
67 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.53 0.32 -0.31
68 AT5G62180 carboxyesterase 20 carboxyesterase 20,
carboxyesterase 20		 -0.53 0.3 -0.31
69 AT4G32890 GATA transcription factor 9 GATA transcription factor 9 -0.52 0.3 -0.31
70 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 -0.52 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
71 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.85 0.46 -0.44 C0133
72 C0177 MST_2429.6 - - - 0.67 0.45 -0.45