AT1G56200 : embryo defective 1303
Query Information
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AGICode AT1G56200
Description embryo defective 1303
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G56200 embryo defective 1303 embryo defective 1303 1 0.31 -0.31
2 AT3G06570 Galactose oxidase/kelch repeat superfamily protein 0.77 0.3 -0.31
3 AT1G02475 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.72 0.33 -0.34
4 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.69 0.32 -0.3
5 AT5G26880 AGAMOUS-like 26 AGAMOUS-like 26 0.68 0.32 -0.31
6 AT4G33670 NAD(P)-linked oxidoreductase superfamily protein 0.68 0.31 -0.34
7 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 0.68 0.32 -0.34
8 AT5G01890 Leucine-rich receptor-like protein kinase family protein -0.67 0.32 -0.32
9 AT5G07770 Actin-binding FH2 protein -0.66 0.32 -0.3
10 AT1G24040 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.66 0.3 -0.33
11 AT3G56840 FAD-dependent oxidoreductase family protein 0.65 0.31 -0.31
12 AT3G15770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits
to 143 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.63 0.31 -0.3
13 AT2G35795 Chaperone DnaJ-domain superfamily protein 0.63 0.34 -0.33
14 AT1G73820 Ssu72-like family protein 0.63 0.3 -0.3
15 AT1G27510 Protein of unknown function (DUF3506) 0.63 0.29 -0.31
16 AT5G55000 potassium channel tetramerisation domain-containing protein
/ pentapeptide repeat-containing protein		 FIP2 0.63 0.31 -0.3
17 AT3G48990 AMP-dependent synthetase and ligase family protein 0.62 0.32 -0.31
18 AT3G61880 cytochrome p450 78a9 cytochrome p450 78a9 -0.62 0.31 -0.32
19 AT3G26630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.31 -0.33
20 AT2G28200 C2H2-type zinc finger family protein 0.62 0.32 -0.34
21 AT1G32310 unknown protein; Has 28 Blast hits to 28 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.3
22 AT1G64330 myosin heavy chain-related -0.61 0.31 -0.32
23 AT5G05710 Pleckstrin homology (PH) domain superfamily protein 0.61 0.32 -0.32
24 AT3G61440 cysteine synthase C1 BETA-SUBSTITUTED ALA SYNTHASE 3;1,
CYSTEINE SYNTHASE C1, cysteine
synthase C1		 0.61 0.33 -0.32
25 AT4G15260 UDP-Glycosyltransferase superfamily protein 0.61 0.31 -0.33
26 AT2G35320 EYES ABSENT homolog EYES ABSENT homolog, EYES ABSENT
homolog		 0.6 0.32 -0.31
27 AT4G00820 IQ-domain 17 IQ-domain 17 -0.6 0.32 -0.3
28 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 -0.6 0.31 -0.33
29 AT2G28060 5'-AMP-activated protein kinase beta-2 subunit protein 0.59 0.32 -0.33
30 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 0.59 0.33 -0.29
31 AT5G16650 Chaperone DnaJ-domain superfamily protein 0.58 0.33 -0.3
32 AT5G05700 arginine-tRNA protein transferase 1 ATATE1, arginine-tRNA protein
transferase 1, DELAYED LEAF
SENESCENCE 1		 0.58 0.32 -0.32
33 AT5G36160 Tyrosine transaminase family protein 0.58 0.31 -0.33
34 AT1G67290 glyoxal oxidase-related protein glyoxal oxidase 1 0.57 0.31 -0.31
35 AT1G20890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.33 -0.31
36 AT1G26090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.3
37 AT4G24210 F-box family protein SLEEPY1 0.57 0.32 -0.31
38 AT1G10660 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G62960.1); Has 155 Blast hits to 154
proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 4; Plants - 139; Viruses - 0; Other Eukaryotes
- 2 (source: NCBI BLink).		 0.56 0.31 -0.3
39 AT5G53340 Galactosyltransferase family protein 0.56 0.31 -0.31
40 AT2G18500 ovate family protein 7 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 7, ovate family protein 7		 -0.56 0.31 -0.32
41 AT5G26230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 membrane-associated kinase
regulator 1		 -0.56 0.29 -0.34
42 AT2G31810 ACT domain-containing small subunit of acetolactate
synthase protein		 0.56 0.3 -0.32
43 AT2G26980 CBL-interacting protein kinase 3 CBL-interacting protein kinase 3,
SNF1-RELATED PROTEIN KINASE 3.17		 0.56 0.33 -0.32
44 AT5G50440 membrin 12 ATMEMB12, membrin 12 0.55 0.33 -0.33
45 AT1G22140 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.55 0.31 -0.32
46 AT1G63210 Transcription elongation factor Spt6 0.55 0.29 -0.29
47 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 -0.55 0.33 -0.31
48 AT4G20790 Leucine-rich repeat protein kinase family protein 0.55 0.31 -0.32
49 AT3G50960 phosducin-like protein 3 homolog phosducin-like protein 3 homolog -0.55 0.32 -0.34
50 AT3G42630 Pentatricopeptide repeat (PPR) superfamily protein 0.55 0.3 -0.33
51 AT3G14960 Galactosyltransferase family protein 0.55 0.35 -0.3
52 AT5G56830 transposable element gene -0.54 0.33 -0.32
53 AT5G13520 peptidase M1 family protein -0.54 0.3 -0.31
54 AT5G04520 Protein of unknown function DUF455 0.54 0.34 -0.29
55 AT2G17090 Protein kinase protein with tetratricopeptide repeat domain SHORT SUSPENSOR -0.54 0.3 -0.3
56 AT3G16640 translationally controlled tumor protein translationally controlled tumor
protein		 0.54 0.31 -0.3
57 AT5G23340 RNI-like superfamily protein 0.53 0.3 -0.32
58 AT2G30070 potassium transporter 1 potassium transporter 1, ATKT1P,
ATKUP1, potassium transporter 1,
POTASSIUM UPTAKE TRANSPORTER 1		 0.53 0.31 -0.31
59 AT4G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.53 0.34 -0.33
60 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 -0.53 0.33 -0.32
61 AT2G39640 glycosyl hydrolase family 17 protein -0.52 0.31 -0.3
62 AT4G35520 MUTL protein homolog 3 ATMLH3, MUTL protein homolog 3 -0.51 0.32 -0.3
63 AT1G80020 transposable element gene -0.51 0.34 -0.3
64 AT4G31890 ARM repeat superfamily protein -0.51 0.3 -0.32
65 AT2G32680 receptor like protein 23 receptor like protein 23, receptor
like protein 23		 -0.5 0.31 -0.32
66 AT3G17140 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.49 0.32 -0.31
67 AT5G12940 Leucine-rich repeat (LRR) family protein -0.49 0.32 -0.31
68 AT5G62420 NAD(P)-linked oxidoreductase superfamily protein -0.49 0.33 -0.31
69 AT5G20390 Glycosyl hydrolase superfamily protein -0.48 0.31 -0.32
70 AT1G14800 Nucleic acid-binding, OB-fold-like protein -0.47 0.33 -0.32
71 AT4G23150 cysteine-rich RLK (RECEPTOR-like protein kinase) 7 cysteine-rich RLK (RECEPTOR-like
protein kinase) 7		 -0.47 0.33 -0.32
72 AT3G44200 NIMA (never in mitosis, gene A)-related 6 NIMA-RELATED KINASE6, IBO1, NIMA
(never in mitosis, gene A)-related
6		 -0.46 0.3 -0.33
73 AT3G25630 transposable element gene -0.46 0.31 -0.31
74 AT5G43760 3-ketoacyl-CoA synthase 20 3-ketoacyl-CoA synthase 20 -0.46 0.31 -0.31
75 AT1G41770 transposable element gene -0.46 0.33 -0.34
76 AT5G28490 Protein of unknown function (DUF640) LIGHT-DEPENDENT SHORT HYPOCOTYLS
1, ORGAN BOUNDARY 2		 -0.46 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0168 MST_2023.2 - - - -0.71 0.47 -0.46
78 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		-0.6 0.31 -0.3 C0098
79 C0238 Sitosterol 3-O-β-D-glucoside - 3-O-β-D-Glucosyl-β-sitosterol sphingolipid biosynthesis -0.59 0.34 -0.33 C0238
80 C0064 Campesterol 3-O-β-D-glucoside - - - -0.56 0.3 -0.35
81 C0250 Sulfoquinovosyldiacylglycerol-36:5 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.52 0.32 -0.34 C0250