AT1G56220 : -
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AGICode AT1G56220
Description Dormancy/auxin associated family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G56220 Dormancy/auxin associated family protein 1 0.31 -0.34
2 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 0.86 0.31 -0.32
3 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.82 0.31 -0.3
4 AT2G29310 NAD(P)-binding Rossmann-fold superfamily protein 0.82 0.33 -0.32
5 AT4G28240 Wound-responsive family protein 0.82 0.33 -0.32
6 AT1G80630 RNI-like superfamily protein 0.82 0.31 -0.31
7 AT2G17450 RING-H2 finger A3A RING-H2 finger A3A 0.8 0.3 -0.33
8 AT3G07310 Protein of unknown function (DUF760) 0.8 0.33 -0.31
9 AT1G01170 Protein of unknown function (DUF1138) 0.8 0.31 -0.31
10 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.79 0.31 -0.32
11 AT2G02860 sucrose transporter 2 ARABIDOPSIS THALIANA SUCROSE
TRANSPORTER 3, ATSUT2, SUCROSE
TRANSPORTER 3, sucrose transporter
2
-0.79 0.32 -0.33
12 AT1G75460 ATP-dependent protease La (LON) domain protein 0.79 0.34 -0.32
13 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1
-0.79 0.32 -0.3
14 AT4G10040 cytochrome c-2 cytochrome c-2 -0.79 0.33 -0.32
15 AT5G56100 glycine-rich protein / oleosin 0.79 0.34 -0.32
16 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7
0.79 0.33 -0.29
17 AT2G34630 geranyl diphosphate synthase 1 GERANYLPYROPHOSPHATE SYNTHASE,
geranyl diphosphate synthase 1
-0.79 0.31 -0.32
18 AT2G38820 Protein of unknown function (DUF506) 0.78 0.32 -0.32
19 AT1G29310 SecY protein transport family protein -0.78 0.33 -0.32
20 AT4G24800 MA3 domain-containing protein EIN2 C-terminus Interacting
Protein 1
0.77 0.32 -0.32
21 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA -0.77 0.31 -0.3
22 AT2G47700 RING/U-box superfamily protein RED AND FAR-RED INSENSITIVE 2 0.77 0.29 -0.3
23 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4
0.76 0.32 -0.31
24 AT5G03180 RING/U-box superfamily protein 0.76 0.32 -0.3
25 AT1G67910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast
hits to 167 proteins in 19 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.76 0.31 -0.32
26 AT1G72820 Mitochondrial substrate carrier family protein 0.76 0.32 -0.31
27 AT3G25585 aminoalcoholphosphotransferase aminoalcoholphosphotransferase,
ATAAPT2
-0.75 0.32 -0.32
28 AT3G01350 Major facilitator superfamily protein 0.75 0.31 -0.32
29 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit
-0.75 0.31 -0.34
30 AT4G33660 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.75 0.31 -0.3
31 AT5G56350 Pyruvate kinase family protein -0.75 0.33 -0.33
32 AT3G13320 cation exchanger 2 atcax2, cation exchanger 2 -0.75 0.29 -0.31
33 AT3G02740 Eukaryotic aspartyl protease family protein -0.75 0.31 -0.3
34 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 0.75 0.33 -0.31
35 AT1G74370 RING/U-box superfamily protein 0.75 0.32 -0.33
36 AT2G46220 Uncharacterized conserved protein (DUF2358) 0.74 0.29 -0.33
37 AT5G35200 ENTH/ANTH/VHS superfamily protein -0.74 0.3 -0.31
38 AT1G77210 sugar transporter 14 sugar transport protein 14, sugar
transport protein 14
0.74 0.29 -0.32
39 AT5G10550 global transcription factor group E2 global transcription factor group
E2
0.74 0.31 -0.33
40 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10
-0.74 0.33 -0.29
41 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B
-0.74 0.31 -0.3
42 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1
-0.73 0.34 -0.3
43 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein
0.73 0.33 -0.31
44 AT5G37600 glutamine synthase clone R1 ARABIDOPSIS GLUTAMINE SYNTHASE
1;1, ARABIDOPSIS THALIANA
GLUTAMINE SYNTHASE CLONE R1,
GLUTAMINE SYNTHASE 1;1, glutamine
synthase clone R1
-0.73 0.32 -0.31
45 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4
0.73 0.32 -0.31
46 AT5G42150 Glutathione S-transferase family protein -0.73 0.31 -0.31
47 AT1G23050 hydroxyproline-rich glycoprotein family protein 0.73 0.32 -0.31
48 AT4G16480 inositol transporter 4 ATINT4, inositol transporter 4 0.73 0.32 -0.32
49 AT2G41730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits
to 25 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.73 0.33 -0.33
50 AT3G13930 Dihydrolipoamide acetyltransferase, long form protein -0.73 0.31 -0.31
51 AT5G61790 calnexin 1 ATCNX1, calnexin 1 -0.72 0.33 -0.3
52 AT1G18460 alpha/beta-Hydrolases superfamily protein 0.72 0.32 -0.31
53 AT1G79460 Terpenoid cyclases/Protein prenyltransferases superfamily
protein
ARABIDOPSIS THALIANA ENT-KAURENE
SYNTHASE, ARABIDOPSIS THALIANA
ENT-KAURENE SYNTHASE 1, GA
REQUIRING 2, KS, ENT-KAURENE
SYNTHASE 1
0.72 0.31 -0.33
54 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).
0.72 0.31 -0.3
55 AT3G19970 alpha/beta-Hydrolases superfamily protein -0.72 0.32 -0.34
56 AT3G21690 MATE efflux family protein -0.72 0.32 -0.31
57 AT4G29520 LOCATED IN: endoplasmic reticulum, plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Saposin B
(InterPro:IPR008139); Has 137 Blast hits to 137 proteins in
50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi -
10; Plants - 36; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).
-0.72 0.3 -0.32
58 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).
0.72 0.31 -0.32
59 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 -0.71 0.31 -0.33
60 AT3G57040 response regulator 9 response regulator 9, RESPONSE
REGULATOR 4
0.71 0.32 -0.32
61 AT3G50910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits
to 75 proteins in 28 species: Archae - 0; Bacteria - 10;
Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).
-0.71 0.31 -0.34
62 AT1G08980 amidase 1 amidase 1, AMIDASE-LIKE PROTEIN 1,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-I, TRANSLOCON AT THE OUTER
MEMBRANE OF CHLOROPLASTS 64-I
0.71 0.31 -0.32
63 AT1G50460 hexokinase-like 1 ATHKL1, hexokinase-like 1 -0.71 0.31 -0.32
64 AT5G60680 Protein of unknown function, DUF584 0.71 0.31 -0.32
65 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 -0.71 0.32 -0.33
66 AT5G49480 Ca2+-binding protein 1 Ca2+-binding protein 1,
Ca2+-binding protein 1
-0.71 0.31 -0.31
67 AT3G14200 Chaperone DnaJ-domain superfamily protein -0.7 0.34 -0.31
68 AT3G25655 inflorescence deficient in abscission (IDA)-like 1 inflorescence deficient in
abscission (IDA)-like 1
-0.7 0.29 -0.33
69 AT2G20670 Protein of unknown function (DUF506) 0.7 0.31 -0.31
70 AT2G37250 adenosine kinase adenosine kinase, ATPADK1 -0.7 0.3 -0.32
71 AT2G44060 Late embryogenesis abundant protein, group 2 0.7 0.3 -0.33
72 AT5G01390 DNAJ heat shock family protein 0.7 0.3 -0.31
73 AT4G35020 RAC-like 3 RAC-like 3, ATROP6, RAC-like 3,
RHO1PS, RHO-RELATED PROTEIN FROM
PLANTS 6
0.7 0.31 -0.32
74 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2
0.7 0.31 -0.32
75 AT2G33810 squamosa promoter binding protein-like 3 squamosa promoter binding
protein-like 3
0.7 0.34 -0.31
76 AT2G17280 Phosphoglycerate mutase family protein -0.7 0.31 -0.32
77 AT5G48030 gametophytic factor 2 gametophytic factor 2 -0.7 0.31 -0.32
78 AT2G29320 NAD(P)-binding Rossmann-fold superfamily protein 0.7 0.33 -0.31
79 AT1G54740 Protein of unknown function (DUF3049) 0.7 0.3 -0.33
80 AT5G44260 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.7 0.31 -0.32
81 AT1G80910 Protein of unknown function (DUF1712) -0.7 0.32 -0.31
82 AT1G23390 Kelch repeat-containing F-box family protein 0.7 0.33 -0.32
83 AT5G24490 30S ribosomal protein, putative 0.7 0.3 -0.32
84 AT5G25210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
0.7 0.3 -0.31
85 AT2G45810 DEA(D/H)-box RNA helicase family protein 0.7 0.31 -0.3
86 AT1G68650 Uncharacterized protein family (UPF0016) -0.7 0.32 -0.32
87 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3
-0.69 0.31 -0.32
88 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1
-0.69 0.31 -0.34
89 AT1G16740 Ribosomal protein L20 -0.69 0.33 -0.32
90 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 -0.69 0.31 -0.3
91 AT1G29240 Protein of unknown function (DUF688) 0.69 0.31 -0.33
92 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).
0.69 0.31 -0.34
93 AT4G26690 PLC-like phosphodiesterase family protein Glycerophosphodiester
phosphodiesterase (GDPD) like 3,
GLYCEROPHOSPHODIESTERASE-LIKE 2,
MUTANT ROOT HAIR 5, SHAVEN 3
-0.69 0.29 -0.33
94 AT3G17910 Surfeit locus 1 cytochrome c oxidase biogenesis protein EMBRYO DEFECTIVE 3121, SURFEIT 1 -0.69 0.31 -0.32
95 AT4G16660 heat shock protein 70 (Hsp 70) family protein -0.69 0.3 -0.33
96 AT2G37940 Arabidopsis Inositol phosphorylceramide synthase 2 Arabidopsis Inositol
phosphorylceramide synthase 2,
enhancing RPW8-mediated HR-like
cell death 1
-0.69 0.31 -0.31
97 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24
-0.69 0.28 -0.35
98 AT1G51820 Leucine-rich repeat protein kinase family protein -0.69 0.31 -0.31
99 AT4G24330 Protein of unknown function (DUF1682) -0.69 0.31 -0.33
100 AT2G39400 alpha/beta-Hydrolases superfamily protein 0.69 0.3 -0.31
101 AT4G24120 YELLOW STRIPE like 1 YELLOW STRIPE LIKE 1, YELLOW
STRIPE like 1
-0.69 0.31 -0.31
102 AT1G18670 Protein kinase superfamily protein IMPAIRED IN BABA-INDUCED STERILITY
1
0.69 0.29 -0.3
103 AT5G05690 Cytochrome P450 superfamily protein CABBAGE 3, CONSTITUTIVE
PHOTOMORPHOGENIC DWARF, CYP90,
CYP90A, CYTOCHROME P450 90A1,
DWARF 3
0.69 0.32 -0.32
104 AT4G01330 Protein kinase superfamily protein 0.69 0.32 -0.31
105 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein
0.69 0.32 -0.32
106 AT4G05070 Wound-responsive family protein 0.69 0.31 -0.32
107 AT4G37560 Acetamidase/Formamidase family protein 0.69 0.33 -0.3
108 AT4G13830 DNAJ-like 20 DNAJ-like 20 0.68 0.34 -0.32
109 AT1G68110 ENTH/ANTH/VHS superfamily protein 0.68 0.3 -0.33
110 AT2G01190 Octicosapeptide/Phox/Bem1p family protein PIGMENT DEFECTIVE 331 -0.68 0.33 -0.3
111 AT1G20030 Pathogenesis-related thaumatin superfamily protein 0.68 0.3 -0.32
112 AT3G62150 P-glycoprotein 21 ATP-binding cassette B21,
P-glycoprotein 21
-0.68 0.3 -0.32
113 AT2G20390 unknown protein; Has 50 Blast hits to 50 proteins in 18
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.68 0.33 -0.31
114 AT3G26300 cytochrome P450, family 71, subfamily B, polypeptide 34 cytochrome P450, family 71,
subfamily B, polypeptide 34
0.68 0.31 -0.32
115 AT3G47836 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.68 0.3 -0.33
116 AT5G40870 uridine kinase/uracil phosphoribosyltransferase 1 uridine kinase/uracil
phosphoribosyltransferase 1,
uridine kinase/uracil
phosphoribosyltransferase 1,
URIDINE KINASE-LIKE 1
0.68 0.32 -0.3
117 AT4G24920 secE/sec61-gamma protein transport protein -0.68 0.3 -0.31
118 AT1G17720 Protein phosphatase 2A, regulatory subunit PR55 ATB BETA -0.68 0.33 -0.3
119 AT4G33670 NAD(P)-linked oxidoreductase superfamily protein 0.68 0.32 -0.31
120 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.68 0.31 -0.31
121 AT5G49360 beta-xylosidase 1 BETA-XYLOSIDASE 1, beta-xylosidase
1
0.68 0.31 -0.35
122 AT1G16210 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1014 (InterPro:IPR010422); Has 16107
Blast hits to 8386 proteins in 1107 species: Archae - 26;
Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants -
526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI
BLink).
-0.68 0.33 -0.31
123 AT1G18630 glycine-rich RNA-binding protein 6 glycine-rich RNA-binding protein 6 -0.67 0.29 -0.31
124 AT1G09240 nicotianamine synthase 3 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 3, nicotianamine synthase
3
-0.67 0.32 -0.3
125 AT5G03610 GDSL-like Lipase/Acylhydrolase superfamily protein -0.67 0.33 -0.31
126 AT4G38040 Exostosin family protein -0.67 0.32 -0.31
127 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8
-0.67 0.32 -0.31
128 AT1G22840 CYTOCHROME C-1 CYTOCHROME C-A, CYTOCHROME C-1 -0.67 0.34 -0.34
129 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V
-0.67 0.3 -0.32
130 AT4G00330 calmodulin-binding receptor-like cytoplasmic kinase 2 calmodulin-binding receptor-like
cytoplasmic kinase 2
-0.67 0.32 -0.29
131 AT1G07890 ascorbate peroxidase 1 ascorbate peroxidase 1, ATAPX01,
ATAPX1, CS1, maternal effect
embryo arrest 6
-0.66 0.33 -0.32
132 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b -0.66 0.3 -0.34
133 AT3G24530 AAA-type ATPase family protein / ankyrin repeat family
protein
-0.66 0.3 -0.31
134 AT4G31870 glutathione peroxidase 7 GLUTATHIONE PEROXIDASE 7,
glutathione peroxidase 7
-0.66 0.32 -0.31
135 AT4G00570 NAD-dependent malic enzyme 2 NAD-dependent malic enzyme 2 -0.66 0.34 -0.31
136 AT3G16150 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein
asparaginase B1 -0.66 0.34 -0.33
137 AT5G05370 Cytochrome b-c1 complex, subunit 8 protein -0.66 0.31 -0.32
138 AT3G49160 pyruvate kinase family protein -0.66 0.31 -0.31
139 AT5G13490 ADP/ATP carrier 2 ADP/ATP carrier 2 -0.66 0.3 -0.33
140 AT4G01080 TRICHOME BIREFRINGENCE-LIKE 26 TRICHOME BIREFRINGENCE-LIKE 26 -0.66 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
141 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion
0.83 0.42 -0.43 C0263
142 C0226 Raffinose pentahydrate D-(+)-Raffinose pentahydrate - galactolipid biosynthesis suppression,
polysaccharide biosynthesis
-0.68 0.33 -0.31