AT3G12370 : -
Query Information
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AGICode AT3G12370
Description Ribosomal protein L10 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12370 Ribosomal protein L10 family protein 1 0.32 -0.3
2 AT2G17630 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.8 0.3 -0.31
3 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.3 -0.29
4 AT1G77750 Ribosomal protein S13/S18 family 0.79 0.31 -0.32
5 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.78 0.32 -0.32
6 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.77 0.33 -0.32
7 AT3G43220 Phosphoinositide phosphatase family protein -0.76 0.32 -0.31
8 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.76 0.31 -0.32
9 AT1G77800 PHD finger family protein -0.75 0.3 -0.33
10 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.29 -0.33
11 AT1G64090 Reticulan like protein B3 Reticulan like protein B3 0.75 0.33 -0.31
12 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.74 0.32 -0.31
13 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.3 -0.31
14 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.74 0.32 -0.32
15 AT2G21160 Translocon-associated protein (TRAP), alpha subunit 0.74 0.3 -0.32
16 AT4G32390 Nucleotide-sugar transporter family protein 0.74 0.32 -0.32
17 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.73 0.31 -0.31
18 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.73 0.31 -0.3
19 AT2G23930 probable small nuclear ribonucleoprotein G probable small nuclear
ribonucleoprotein G		 0.73 0.32 -0.34
20 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.33
21 AT1G14210 Ribonuclease T2 family protein 0.73 0.31 -0.31
22 AT1G19360 Nucleotide-diphospho-sugar transferase family protein reduced residual arabinose 3 0.72 0.34 -0.33
23 AT4G23980 auxin response factor 9 auxin response factor 9 -0.72 0.34 -0.34
24 AT1G27340 Galactose oxidase/kelch repeat superfamily protein 0.71 0.32 -0.32
25 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 0.71 0.32 -0.32
26 AT3G12030 Protein of unknown function DUF106, transmembrane 0.71 0.3 -0.29
27 AT3G56140 Protein of unknown function (DUF399 and DUF3411) -0.71 0.31 -0.33
28 AT5G63400 adenylate kinase 1 adenylate kinase 1 0.71 0.33 -0.32
29 AT4G36420 Ribosomal protein L12 family protein 0.7 0.31 -0.3
30 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.7 0.31 -0.33
31 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 -0.7 0.31 -0.3
32 AT5G66680 dolichyl-diphosphooligosaccharide-protein
glycosyltransferase 48kDa subunit family protein		 DEFECTIVE GLYCOSYLATION 0.7 0.32 -0.31
33 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.7 0.29 -0.32
34 AT1G02080 transcription regulators -0.7 0.33 -0.34
35 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.7 0.33 -0.33
36 AT5G54970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.32 -0.32
37 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.31 -0.32
38 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 -0.69 0.33 -0.29
39 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.69 0.31 -0.29
40 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.28 -0.34
41 AT4G31820 Phototropic-responsive NPH3 family protein ENHANCER OF PINOID, MACCHI-BOU 4,
NAKED PINS IN YUC MUTANTS 1		 -0.68 0.31 -0.33
42 AT5G20840 Phosphoinositide phosphatase family protein -0.68 0.31 -0.32
43 AT1G15340 methyl-CPG-binding domain 10 methyl-CPG-binding domain 10 -0.67 0.31 -0.32
44 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog -0.66 0.33 -0.33
45 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA -0.66 0.3 -0.32
46 AT1G72650 TRF-like 6 TRF-like 6 -0.66 0.33 -0.31
47 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.66 0.29 -0.34
48 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 -0.66 0.31 -0.32
49 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.65 0.32 -0.31
50 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.65 0.31 -0.31
51 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 -0.65 0.33 -0.3
52 AT1G48840 Plant protein of unknown function (DUF639) -0.65 0.31 -0.31
53 AT5G58720 smr (Small MutS Related) domain-containing protein -0.65 0.31 -0.33
54 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.64 0.32 -0.3
55 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.64 0.31 -0.3
56 AT3G17920 Outer arm dynein light chain 1 protein -0.64 0.34 -0.3
57 AT3G22380 time for coffee TIME FOR COFFEE -0.63 0.29 -0.32
58 AT3G06290 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3B, yeast Sac3 homolog B -0.63 0.31 -0.33
59 AT3G57470 Insulinase (Peptidase family M16) family protein -0.63 0.31 -0.32
60 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 -0.63 0.31 -0.32
61 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.63 0.33 -0.32
62 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.63 0.32 -0.3
63 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B -0.62 0.32 -0.3
64 AT2G42330 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 -0.61 0.31 -0.33
65 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.61 0.32 -0.29
66 AT3G01310 Phosphoglycerate mutase-like family protein -0.61 0.32 -0.3
67 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 -0.61 0.3 -0.3
68 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.61 0.33 -0.33
69 AT4G32660 Protein kinase superfamily protein AME3 -0.6 0.29 -0.31
70 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 -0.6 0.3 -0.31
71 AT3G33530 Transducin family protein / WD-40 repeat family protein -0.6 0.29 -0.32
72 AT4G18130 phytochrome E phytochrome E -0.6 0.32 -0.32
73 AT2G46560 transducin family protein / WD-40 repeat family protein -0.6 0.32 -0.31
74 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 -0.6 0.32 -0.3
75 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 -0.6 0.32 -0.32
76 AT2G24520 H(+)-ATPase 5 H(+)-ATPase 5, H(+)-ATPase 5 -0.6 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.77 0.44 -0.45 C0109
78 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.76 0.47 -0.43 C0210