AT3G12610 : DNA-DAMAGE REPAIR/TOLERATION 100
Query Information
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AGICode AT3G12610
Description Leucine-rich repeat (LRR) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12610 Leucine-rich repeat (LRR) family protein DNA-DAMAGE REPAIR/TOLERATION 100 1 0.3 -0.32
2 AT3G07010 Pectin lyase-like superfamily protein 0.88 0.31 -0.34
3 AT4G28050 tetraspanin7 tetraspanin7 0.85 0.29 -0.32
4 AT1G64640 early nodulin-like protein 8 AtENODL8, early nodulin-like
protein 8		 0.84 0.32 -0.29
5 AT4G14960 Tubulin/FtsZ family protein TUA6 0.83 0.3 -0.32
6 AT4G23820 Pectin lyase-like superfamily protein 0.82 0.3 -0.31
7 AT4G14750 IQ-domain 19 IQ-domain 19 0.82 0.3 -0.32
8 AT1G11545 xyloglucan endotransglucosylase/hydrolase 8 xyloglucan
endotransglucosylase/hydrolase 8		 0.82 0.32 -0.32
9 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.82 0.31 -0.31
10 AT1G12070 Immunoglobulin E-set superfamily protein 0.82 0.31 -0.33
11 AT1G75680 glycosyl hydrolase 9B7 glycosyl hydrolase 9B7, glycosyl
hydrolase 9B7		 0.81 0.31 -0.34
12 AT1G04820 tubulin alpha-4 chain TORTIFOLIA 2, tubulin alpha-4
chain		 0.81 0.3 -0.3
13 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein -0.8 0.31 -0.3
14 AT3G52940 Ergosterol biosynthesis ERG4/ERG24 family EXTRA-LONG-LIFESPAN 1, FACKEL,
HYD2		 0.8 0.33 -0.31
15 AT5G48900 Pectin lyase-like superfamily protein 0.8 0.31 -0.3
16 AT5G25460 Protein of unknown function, DUF642 0.8 0.3 -0.33
17 AT5G02890 HXXXD-type acyl-transferase family protein 0.8 0.32 -0.32
18 AT3G58120 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP61, BZIP61 0.8 0.31 -0.3
19 AT4G12880 early nodulin-like protein 19 AtENODL19, early nodulin-like
protein 19		 0.79 0.34 -0.31
20 AT2G01450 MAP kinase 17 MAP kinase 17, MAP kinase 17 -0.78 0.31 -0.32
21 AT1G29440 SAUR-like auxin-responsive protein family 0.78 0.32 -0.3
22 AT5G50000 Protein kinase superfamily protein 0.78 0.33 -0.31
23 AT1G69480 EXS (ERD1/XPR1/SYG1) family protein -0.78 0.32 -0.31
24 AT5G12250 beta-6 tubulin beta-6 tubulin 0.77 0.33 -0.31
25 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 -0.77 0.28 -0.32
26 AT4G28980 CDK-activating kinase 1AT CDK-activating kinase 1AT,
CYCLIN-DEPENDENT KINASE F;1		 0.77 0.34 -0.31
27 AT2G37640 Barwin-like endoglucanases superfamily protein EXPANSIN 3, ARABIDOPSIS THALIANA
EXPANSIN A3, ATHEXP ALPHA 1.9,
EXP3		 0.77 0.3 -0.31
28 AT3G57520 seed imbibition 2 seed imbibition 2, raffinose
synthase 2, seed imbibition 2		 -0.77 0.3 -0.31
29 AT1G04040 HAD superfamily, subfamily IIIB acid phosphatase 0.77 0.36 -0.33
30 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11		 0.77 0.32 -0.31
31 AT5G18060 SAUR-like auxin-responsive protein family 0.77 0.3 -0.32
32 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.29 -0.32
33 AT1G50010 tubulin alpha-2 chain tubulin alpha-2 chain 0.76 0.3 -0.31
34 AT1G48610 AT hook motif-containing protein 0.76 0.29 -0.29
35 AT5G07590 Transducin/WD40 repeat-like superfamily protein 0.76 0.32 -0.33
36 AT1G05210 Transmembrane protein 97, predicted 0.76 0.3 -0.35
37 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 -0.76 0.3 -0.32
38 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 0.76 0.32 -0.31
39 AT4G18030 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.75 0.3 -0.3
40 AT3G22460 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 O-acetylserine (thiol) lyase
(OAS-TL) isoform A2		 -0.75 0.3 -0.3
41 AT3G55360 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATTSC13, ECERIFERUM 10, ENOYL-COA
REDUCTASE, TSC13		 0.75 0.31 -0.3
42 AT4G22010 SKU5 similar 4 SKU5 similar 4 0.75 0.34 -0.29
43 AT1G47200 WPP domain protein 2 WPP domain protein 2 0.75 0.34 -0.3
44 AT5G43100 Eukaryotic aspartyl protease family protein -0.74 0.33 -0.29
45 AT5G06930 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3369 Blast hits to 1526 proteins in
313 species: Archae - 2; Bacteria - 910; Metazoa - 754;
Fungi - 336; Plants - 137; Viruses - 11; Other Eukaryotes -
1219 (source: NCBI BLink).		 0.74 0.32 -0.3
46 AT1G56670 GDSL-like Lipase/Acylhydrolase superfamily protein 0.74 0.33 -0.3
47 AT4G34760 SAUR-like auxin-responsive protein family 0.74 0.32 -0.33
48 AT1G20190 expansin 11 ATEXP11, expansin 11, ATHEXP ALPHA
1.14, EXPANSIN 11, expansin 11		 0.74 0.3 -0.3
49 AT3G43720 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.74 0.31 -0.32
50 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.73 0.31 -0.3
51 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 -0.73 0.32 -0.32
52 AT2G44740 cyclin p4;1 cyclin p4;1 0.73 0.31 -0.32
53 AT3G12710 DNA glycosylase superfamily protein 0.73 0.31 -0.31
54 AT5G15160 BANQUO 2 BASIC HELIX-LOOP-HELIX PROTEIN
134, BANQUO 2		 0.73 0.34 -0.31
55 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.73 0.29 -0.3
56 AT4G38850 SAUR-like auxin-responsive protein family ARABIDOPSIS THALIANA SMALL AUXIN
UPREGULATED 15, ARABIDOPSIS
COLUMBIA SAUR GENE 1, SMALL AUXIN
UPREGULATED 15, SMALL AUXIN UP RNA
1 FROM ARABIDOPSIS THALIANA
ECOTYPE COLUMBIA		 0.73 0.3 -0.32
57 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a 0.73 0.31 -0.31
58 AT4G30410 sequence-specific DNA binding transcription factors 0.72 0.33 -0.3
59 AT2G45570 cytochrome P450, family 76, subfamily C, polypeptide 2 cytochrome P450, family 76,
subfamily C, polypeptide 2		 -0.72 0.32 -0.29
60 AT5G43930 Transducin family protein / WD-40 repeat family protein -0.72 0.34 -0.3
61 AT2G21200 SAUR-like auxin-responsive protein family 0.72 0.32 -0.3
62 AT4G32330 TPX2 (targeting protein for Xklp2) protein family 0.72 0.34 -0.29
63 AT5G49800 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.72 0.31 -0.33
64 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 0.72 0.31 -0.32
65 AT4G01110 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits
to 272 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.32 -0.3
66 AT2G35880 TPX2 (targeting protein for Xklp2) protein family 0.71 0.33 -0.31
67 AT5G02540 NAD(P)-binding Rossmann-fold superfamily protein 0.71 0.3 -0.33
68 AT5G04540 Myotubularin-like phosphatases II superfamily -0.71 0.33 -0.33
69 AT5G05840 Protein of unknown function (DUF620) 0.71 0.31 -0.32
70 AT5G03760 Nucleotide-diphospho-sugar transferases superfamily protein ATCSLA09, ATCSLA9, CSLA09,
CELLULOSE SYNTHASE LIKE A9,
RESISTANT TO AGROBACTERIUM
TRANSFORMATION 4		 0.71 0.31 -0.32
71 AT4G02500 UDP-xylosyltransferase 2 ARABIDOPSIS THALIANA
UDP-XYLOSYLTRANSFERASE 2,
UDP-xylosyltransferase 2, XYG
XYLOSYLTRANSFERASE 2		 0.71 0.32 -0.32
72 AT1G18160 Protein kinase superfamily protein -0.71 0.33 -0.31
73 AT5G24580 Heavy metal transport/detoxification superfamily protein 0.71 0.31 -0.31
74 AT3G57760 Protein kinase superfamily protein -0.7 0.32 -0.33
75 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 -0.7 0.29 -0.32
76 AT3G26910 hydroxyproline-rich glycoprotein family protein -0.7 0.31 -0.31
77 AT3G62630 Protein of unknown function (DUF1645) 0.7 0.32 -0.33
78 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor 0.7 0.31 -0.32
79 AT2G23110 Late embryogenesis abundant protein, group 6 -0.7 0.33 -0.32
80 AT1G41830 SKU5-similar 6 SKU5 SIMILAR 6, SKU5-similar 6 0.7 0.3 -0.33
81 AT1G29450 SAUR-like auxin-responsive protein family 0.69 0.31 -0.31
82 AT3G25580 Thioredoxin superfamily protein 0.69 0.3 -0.31
83 AT4G04960 Concanavalin A-like lectin protein kinase family protein -0.69 0.3 -0.31
84 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 -0.69 0.32 -0.31
85 AT2G25740 ATP-dependent protease La (LON) domain protein -0.69 0.33 -0.36
86 AT1G69530 expansin A1 AT-EXP1, ATEXP1, expansin A1,
ATHEXP ALPHA 1.2, EXPANSIN 1,
expansin A1		 0.69 0.31 -0.3
87 AT1G05890 RING/U-box superfamily protein ARIADNE 5, ARABIDOPSIS ARIADNE 5 -0.69 0.29 -0.34
88 AT3G06590 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.31 -0.33
89 AT1G72260 thionin 2.1 thionin 2.1, THI2.1.1 -0.69 0.32 -0.31
90 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 -0.69 0.32 -0.29
91 AT1G67730 beta-ketoacyl reductase 1 ATKCR1, beta-ketoacyl reductase 1,
YBR159		 0.69 0.32 -0.29
92 AT3G20460 Major facilitator superfamily protein 0.69 0.33 -0.33
93 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.67 0.32 -0.33
94 AT5G01450 RING/U-box superfamily protein -0.67 0.32 -0.33
95 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.3 -0.33
96 AT3G48860 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins
in 897 species: Archae - 180; Bacteria - 1190; Metazoa -
6552; Fungi - 1361; Plants - 886; Viruses - 50; Other
Eukaryotes - 2210 (source: NCBI BLink).		 -0.66 0.3 -0.33
97 AT3G25180 cytochrome P450, family 82, subfamily G, polypeptide 1 cytochrome P450, family 82,
subfamily G, polypeptide 1		 -0.66 0.3 -0.33
98 AT5G55310 DNA topoisomerase 1 beta TOPOISOMERASE 1, DNA topoisomerase
1 beta		 -0.66 0.32 -0.34
99 AT1G68765 Putative membrane lipoprotein INFLORESCENCE DEFICIENT IN
ABSCISSION		 -0.66 0.31 -0.32
100 AT3G57530 calcium-dependent protein kinase 32 ATCPK32, CDPK32, calcium-dependent
protein kinase 32		 -0.65 0.32 -0.28
101 AT2G17975 zinc finger (Ran-binding) family protein -0.65 0.33 -0.33
102 AT3G01320 SIN3-like 1 SIN3-like 1 -0.65 0.29 -0.31
103 AT1G05100 mitogen-activated protein kinase kinase kinase 18 mitogen-activated protein kinase
kinase kinase 18		 -0.65 0.33 -0.33
104 AT4G12760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.32 -0.31
105 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.64 0.33 -0.3
106 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 -0.64 0.32 -0.35
107 AT2G23980 cyclic nucleotide-gated channel 6 cyclic nucleotide-gated channel 6,
CYCLIC NUCLEOTIDE GATED CHANNEL 6,
cyclic nucleotide-gated channel 6		 -0.63 0.32 -0.32
108 AT5G57560 Xyloglucan endotransglucosylase/hydrolase family protein Touch 4, xyloglucan
endotransglucosylase/hydrolase 22		 -0.63 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
109 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - -0.67 0.49 -0.43 C0023
110 C0161 MST_1566.3 - - - -0.66 0.49 -0.47
111 C0160 MST_1509.5 - - - -0.65 0.46 -0.49
112 C0163 MST_1589.2 - - - -0.65 0.43 -0.43