AT3G11250 : -
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AGICode AT3G11250
Description Ribosomal protein L10 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G11250 Ribosomal protein L10 family protein 1 0.3 -0.29
2 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.91 0.31 -0.33
3 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3
0.91 0.32 -0.33
4 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB
0.9 0.34 -0.31
5 AT3G52580 Ribosomal protein S11 family protein 0.89 0.3 -0.31
6 AT1G07070 Ribosomal protein L35Ae family protein 0.89 0.3 -0.31
7 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.89 0.32 -0.31
8 AT1G73230 Nascent polypeptide-associated complex NAC 0.88 0.33 -0.32
9 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 0.88 0.33 -0.31
10 AT1G29250 Alba DNA/RNA-binding protein 0.88 0.31 -0.31
11 AT3G07110 Ribosomal protein L13 family protein 0.88 0.33 -0.3
12 AT5G15520 Ribosomal protein S19e family protein 0.87 0.32 -0.34
13 AT5G35530 Ribosomal protein S3 family protein 0.87 0.29 -0.33
14 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.87 0.32 -0.32
15 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.87 0.3 -0.3
16 AT3G03960 TCP-1/cpn60 chaperonin family protein 0.87 0.34 -0.3
17 AT2G19730 Ribosomal L28e protein family 0.87 0.33 -0.33
18 AT1G04680 Pectin lyase-like superfamily protein 0.86 0.33 -0.32
19 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.86 0.33 -0.33
20 AT4G34555 Ribosomal protein S25 family protein 0.86 0.32 -0.31
21 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B
0.86 0.34 -0.31
22 AT3G56340 Ribosomal protein S26e family protein 0.86 0.32 -0.32
23 AT3G28900 Ribosomal protein L34e superfamily protein 0.86 0.32 -0.31
24 AT2G37190 Ribosomal protein L11 family protein 0.86 0.32 -0.33
25 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein
0.86 0.31 -0.3
26 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C
0.86 0.32 -0.33
27 AT3G16780 Ribosomal protein L19e family protein 0.86 0.31 -0.31
28 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b
0.86 0.32 -0.32
29 AT2G35605 SWIB/MDM2 domain superfamily protein 0.86 0.31 -0.31
30 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.31 -0.3
31 AT4G16720 Ribosomal protein L23/L15e family protein 0.85 0.33 -0.33
32 AT5G05570 transducin family protein / WD-40 repeat family protein -0.85 0.29 -0.32
33 AT2G33370 Ribosomal protein L14p/L23e family protein 0.85 0.31 -0.31
34 AT5G56710 Ribosomal protein L31e family protein 0.85 0.32 -0.31
35 AT2G25210 Ribosomal protein L39 family protein 0.85 0.32 -0.31
36 AT2G20450 Ribosomal protein L14 0.85 0.31 -0.3
37 AT1G22930 T-complex protein 11 -0.85 0.34 -0.32
38 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit
0.85 0.32 -0.31
39 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1
-0.85 0.33 -0.31
40 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein
0.85 0.3 -0.32
41 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA
0.85 0.34 -0.32
42 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
-0.84 0.32 -0.3
43 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.84 0.31 -0.32
44 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A
0.84 0.33 -0.31
45 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.31 -0.33
46 AT1G20950 Phosphofructokinase family protein 0.84 0.31 -0.33
47 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1
0.84 0.32 -0.33
48 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.84 0.31 -0.31
49 AT4G17520 Hyaluronan / mRNA binding family 0.83 0.32 -0.32
50 AT2G27720 60S acidic ribosomal protein family 0.83 0.33 -0.31
51 AT3G25620 ABC-2 type transporter family protein ATP-binding cassette G21 -0.83 0.3 -0.32
52 AT4G10450 Ribosomal protein L6 family 0.83 0.3 -0.31
53 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.83 0.34 -0.32
54 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.83 0.33 -0.31
55 AT5G53350 CLP protease regulatory subunit X CLP protease regulatory subunit X -0.83 0.28 -0.33
56 AT5G47700 60S acidic ribosomal protein family 0.83 0.31 -0.32
57 AT3G06610 DNA-binding enhancer protein-related 0.83 0.31 -0.3
58 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.83 0.31 -0.34
59 AT3G02560 Ribosomal protein S7e family protein 0.83 0.32 -0.33
60 AT3G61960 Protein kinase superfamily protein -0.83 0.32 -0.3
61 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 0.83 0.32 -0.32
62 AT3G56620 nodulin MtN21 /EamA-like transporter family protein -0.83 0.33 -0.33
63 AT3G51730 saposin B domain-containing protein -0.82 0.32 -0.32
64 AT3G44590 60S acidic ribosomal protein family 0.82 0.3 -0.31
65 AT5G61840 Exostosin family protein GUT1 0.82 0.31 -0.32
66 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.82 0.29 -0.32
67 AT3G02080 Ribosomal protein S19e family protein 0.82 0.33 -0.3
68 AT3G53960 Major facilitator superfamily protein -0.82 0.31 -0.34
69 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2
-0.82 0.29 -0.32
70 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4
0.82 0.31 -0.32
71 AT5G22440 Ribosomal protein L1p/L10e family 0.82 0.32 -0.31
72 AT5G66920 SKU5 similar 17 SKU5 similar 17 0.82 0.34 -0.31
73 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1
0.82 0.31 -0.32
74 AT3G10610 Ribosomal S17 family protein 0.82 0.31 -0.33
75 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.82 0.31 -0.32
76 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1
-0.81 0.32 -0.29
77 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B
0.81 0.31 -0.35
78 AT2G41840 Ribosomal protein S5 family protein 0.81 0.32 -0.33
79 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F
-0.81 0.35 -0.3
80 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.81 0.28 -0.31
81 AT1G55890 Tetratricopeptide repeat (TPR)-like superfamily protein 0.81 0.32 -0.32
82 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 0.81 0.33 -0.32
83 AT1G04340 HR-like lesion-inducing protein-related 0.8 0.32 -0.33
84 AT2G47600 magnesium/proton exchanger magnesium/proton exchanger,
ATMHX1, magnesium/proton
exchanger, MAGNESIUM/PROTON
EXCHANGER 1
-0.8 0.32 -0.32
85 AT1G65430 IBR domain-containing protein ARIADNE 8, ARABIDOPSIS ARIADNE 8 -0.8 0.32 -0.32
86 AT3G17000 ubiquitin-conjugating enzyme 32 ubiquitin-conjugating enzyme 32 -0.8 0.3 -0.33
87 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.8 0.33 -0.32
88 AT3G58100 plasmodesmata callose-binding protein 5 plasmodesmata callose-binding
protein 5
0.8 0.32 -0.32
89 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.8 0.33 -0.31
90 AT5G10650 RING/U-box superfamily protein -0.8 0.32 -0.29
91 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C
0.8 0.32 -0.3
92 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1
0.8 0.32 -0.3
93 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10
0.8 0.29 -0.33
94 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.79 0.31 -0.3
95 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.79 0.33 -0.32
96 AT4G36210 Protein of unknown function (DUF726) -0.79 0.31 -0.33
97 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
-0.79 0.31 -0.32
98 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain
ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE
-0.79 0.32 -0.3
99 AT3G26380 Melibiase family protein -0.79 0.32 -0.31
100 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H
-0.78 0.3 -0.33
101 AT4G32250 Protein kinase superfamily protein -0.78 0.33 -0.32
102 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase
-0.78 0.32 -0.31
103 AT3G24740 Protein of unknown function (DUF1644) -0.78 0.32 -0.3
104 AT1G17550 homology to ABI2 homology to ABI2 -0.78 0.32 -0.31
105 AT1G03080 kinase interacting (KIP1-like) family protein -0.78 0.31 -0.31
106 AT3G26100 Regulator of chromosome condensation (RCC1) family protein -0.78 0.3 -0.33
107 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.78 0.32 -0.31
108 AT5G22850 Eukaryotic aspartyl protease family protein -0.78 0.3 -0.31
109 AT1G42470 Patched family protein -0.78 0.3 -0.32
110 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein
XYLEM INTERMIXED WITH PHLOEM 1 -0.78 0.31 -0.31
111 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.78 0.32 -0.31
112 AT4G20930 6-phosphogluconate dehydrogenase family protein -0.78 0.31 -0.3
113 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1
-0.77 0.32 -0.31
114 AT1G68820 Transmembrane Fragile-X-F-associated protein -0.77 0.33 -0.31
115 AT4G13550 triglyceride lipases;triglyceride lipases -0.77 0.32 -0.31
116 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1
-0.77 0.32 -0.31
117 AT3G21250 multidrug resistance-associated protein 6 ATP-binding cassette C8,
ARABIDOPSIS THALIANA MULTIDRUG
RESISTANCE-ASSOCIATED PROTEIN 6,
multidrug resistance-associated
protein 6
-0.77 0.32 -0.3
118 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).
-0.77 0.33 -0.31
119 AT3G16940 calmodulin binding;transcription regulators -0.76 0.31 -0.33
120 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein
-0.76 0.31 -0.31
121 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.76 0.32 -0.32
122 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule -0.76 0.3 -0.32
123 AT1G05840 Eukaryotic aspartyl protease family protein -0.76 0.33 -0.32
124 AT4G30490 AFG1-like ATPase family protein -0.76 0.3 -0.31
125 AT1G58200 MSCS-like 3 MSCS-like 3 -0.76 0.32 -0.32
126 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.76 0.3 -0.31
127 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10
-0.76 0.33 -0.3
128 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).
-0.75 0.32 -0.29
129 AT1G05940 cationic amino acid transporter 9 cationic amino acid transporter 9 -0.75 0.29 -0.32
130 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM -0.75 0.32 -0.3
131 AT5G57815 Cytochrome c oxidase, subunit Vib family protein -0.75 0.33 -0.31
132 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 -0.75 0.3 -0.32
133 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.75 0.31 -0.3
134 AT1G18270 ketose-bisphosphate aldolase class-II family protein -0.75 0.33 -0.31
135 AT2G31260 autophagy 9 (APG9) autophagy 9, ATAPG9 -0.75 0.31 -0.33
136 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2
-0.75 0.32 -0.3
137 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta
-0.75 0.31 -0.32
138 AT4G33950 Protein kinase superfamily protein OPEN STOMATA 1, OPEN STOMATA 1,
P44, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-6,
SNF1-RELATED PROTEIN KINASE 2.6,
SRK2E
-0.74 0.33 -0.33
139 AT1G01710 Acyl-CoA thioesterase family protein -0.74 0.31 -0.3
140 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog -0.74 0.3 -0.31
141 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.31 -0.32
142 AT2G20920 Protein of unknown function (DUF3353) -0.74 0.32 -0.32
143 AT1G04970 lipid-binding serum glycoprotein family protein -0.74 0.31 -0.32
144 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6
-0.74 0.32 -0.3
145 AT4G22980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits
to 468 proteins in 130 species: Archae - 5; Bacteria - 23;
Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).
-0.74 0.32 -0.31
146 AT2G44130 Galactose oxidase/kelch repeat superfamily protein -0.74 0.31 -0.3
147 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.73 0.31 -0.31
148 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 -0.73 0.31 -0.29
149 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).
-0.73 0.33 -0.3
150 AT5G24800 basic leucine zipper 9 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 9, basic leucine zipper 9,
BASIC LEUCINE ZIPPER O2 HOMOLOG 2
-0.73 0.32 -0.32
151 AT4G18050 P-glycoprotein 9 ATP-binding cassette B9,
P-glycoprotein 9
-0.73 0.33 -0.3
152 AT5G65620 Zincin-like metalloproteases family protein -0.73 0.31 -0.31
153 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7
-0.73 0.32 -0.32
154 AT1G78670 gamma-glutamyl hydrolase 3 gamma-glutamyl hydrolase 3,
gamma-glutamyl hydrolase 3
-0.73 0.33 -0.33
155 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).
-0.73 0.3 -0.32
156 AT3G28007 Nodulin MtN3 family protein AtSWEET4, SWEET4 -0.73 0.3 -0.32
157 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein -0.73 0.3 -0.33
158 AT3G20300 Protein of unknown function (DUF3537) -0.73 0.32 -0.31
159 AT5G48020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.72 0.31 -0.32
160 AT3G11880 Protein of unknown function DUF2359, transmembrane -0.72 0.33 -0.32
161 AT1G17145 RING/U-box superfamily protein -0.72 0.32 -0.34
162 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C
-0.72 0.32 -0.33
163 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.72 0.31 -0.32
164 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC -0.72 0.31 -0.3
165 AT3G21790 UDP-Glycosyltransferase superfamily protein -0.72 0.3 -0.33
166 AT5G11840 Protein of unknown function (DUF1230) -0.72 0.32 -0.3
167 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain
-0.72 0.32 -0.32
168 AT5G35560 DENN (AEX-3) domain-containing protein -0.72 0.31 -0.3
169 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5
-0.72 0.31 -0.32
170 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.72 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
171 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis
-0.77 0.43 -0.45 C0190