AT3G12070 : RAB geranylgeranyl transferase beta subunit 2
Query Information
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AGICode AT3G12070
Description RAB geranylgeranyl transferase beta subunit 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12070 RAB geranylgeranyl transferase beta subunit 2 RAB geranylgeranyl transferase
beta subunit 2, RAB geranylgeranyl
transferase beta subunit 2		 1 0.31 -0.32
2 AT1G04920 sucrose phosphate synthase 3F sucrose phosphate synthase 3F,
sucrose phosphate synthase 3F		 -0.67 0.31 -0.31
3 AT1G22800 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.32 -0.31
4 AT1G03160 FZO-like FZO-like -0.65 0.34 -0.31
5 AT1G05600 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3101 -0.64 0.33 -0.31
6 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 0.64 0.31 -0.32
7 AT2G01570 GRAS family transcription factor family protein REPRESSOR OF GA, REPRESSOR OF
GA1-3 1		 -0.63 0.31 -0.32
8 AT3G52540 ovate family protein 18 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 18, ovate family protein
18		 -0.62 0.3 -0.31
9 AT3G26300 cytochrome P450, family 71, subfamily B, polypeptide 34 cytochrome P450, family 71,
subfamily B, polypeptide 34		 -0.62 0.32 -0.35
10 AT1G06730 pfkB-like carbohydrate kinase family protein -0.6 0.32 -0.32
11 AT1G08370 decapping 1 ATDCP1, decapping 1 0.58 0.33 -0.32
12 AT2G37540 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.31 -0.31
13 AT2G36940 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.32 -0.31
14 AT1G47990 gibberellin 2-oxidase 4 Arabidopsis thaliana gibberellin
2-oxidase 4, gibberellin 2-oxidase
4		 0.57 0.31 -0.33
15 AT3G04890 Uncharacterized conserved protein (DUF2358) -0.57 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
16 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.78 0.47 -0.51 C0151
17 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.65 0.43 -0.46 C0261
18 C0048 8-Methylsulfinyl-n-octylglucosinolate - 8-Methylsulfinyloctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.6 0.33 -0.29 C0048
19 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		-0.58 0.33 -0.3 C0061