AGICode | AT3G12530 |
Description | PSF2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G12530 | PSF2 | PSF2 | 1 | 0.3 | -0.32 | ||
2 | AT3G19630 | Radical SAM superfamily protein | 0.73 | 0.3 | -0.31 | |||
3 | AT5G49460 | ATP citrate lyase subunit B 2 | ATP citrate lyase subunit B 2 | 0.73 | 0.33 | -0.33 | ||
4 | AT3G07640 | unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.3 | -0.34 | |||
5 | AT1G09760 | U2 small nuclear ribonucleoprotein A | U2 small nuclear ribonucleoprotein A |
0.72 | 0.31 | -0.32 | ||
6 | AT2G37020 | Translin family protein | 0.71 | 0.31 | -0.31 | |||
7 | AT5G45090 | phloem protein 2-A7 | phloem protein 2-A7, phloem protein 2-A7 |
-0.7 | 0.33 | -0.3 | ||
8 | AT1G16730 | unknown protein 6 | unknown protein 6 | -0.7 | 0.32 | -0.32 | ||
9 | AT2G20810 | galacturonosyltransferase 10 | galacturonosyltransferase 10, LGT4 | 0.68 | 0.31 | -0.32 | ||
10 | AT5G05220 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.67 | 0.34 | -0.31 | |||
11 | AT3G13672 | TRAF-like superfamily protein | -0.67 | 0.29 | -0.31 | |||
12 | AT1G73680 | alpha dioxygenase | alpha dioxygenase | -0.67 | 0.32 | -0.32 | ||
13 | AT3G50670 | U1 small nuclear ribonucleoprotein-70K | U1 small nuclear ribonucleoprotein-70K, U1SNRNP |
0.66 | 0.31 | -0.31 | ||
14 | AT3G08870 | Concanavalin A-like lectin protein kinase family protein | -0.66 | 0.32 | -0.31 | |||
15 | AT1G01830 | ARM repeat superfamily protein | -0.65 | 0.33 | -0.34 | |||
16 | AT3G11500 | Small nuclear ribonucleoprotein family protein | 0.64 | 0.31 | -0.34 | |||
17 | AT4G30960 | SOS3-interacting protein 3 | CBL-INTERACTING PROTEIN KINASE 6, CBL-INTERACTING PROTEIN KINASE 6, SOS3-interacting protein 3, SNF1-RELATED PROTEIN KINASE 3.14 |
-0.64 | 0.3 | -0.31 | ||
18 | AT5G38780 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.64 | 0.29 | -0.3 | |||
19 | AT4G00830 | RNA-binding (RRM/RBD/RNP motifs) family protein | LHP1-Interacting Factor 2 | 0.63 | 0.29 | -0.33 | ||
20 | AT3G24250 | glycine-rich protein | 0.63 | 0.33 | -0.32 | |||
21 | AT3G55460 | SC35-like splicing factor 30 | SC35-like splicing factor 30, SC35-like splicing factor 30 |
0.62 | 0.31 | -0.32 | ||
22 | AT4G26090 | NB-ARC domain-containing disease resistance protein | RESISTANT TO P. SYRINGAE 2 | -0.62 | 0.31 | -0.33 | ||
23 | AT1G22970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.61 | 0.34 | -0.31 | |||
24 | AT5G10920 | L-Aspartase-like family protein | 0.61 | 0.33 | -0.32 | |||
25 | AT4G04840 | methionine sulfoxide reductase B6 | methionine sulfoxide reductase B6, methionine sulfoxide reductase B6 |
0.61 | 0.34 | -0.3 | ||
26 | AT5G10980 | Histone superfamily protein | 0.6 | 0.31 | -0.33 | |||
27 | AT5G63800 | Glycosyl hydrolase family 35 protein | beta-galactosidase 6, MUCILAGE-MODIFIED 2 |
-0.6 | 0.31 | -0.32 | ||
28 | AT2G44880 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.6 | 0.29 | -0.32 | |||
29 | AT3G60600 | vesicle associated protein | (AT)VAP, vesicle associated protein, VAP27, VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 |
0.6 | 0.3 | -0.31 | ||
30 | AT2G35940 | BEL1-like homeodomain 1 | BEL1-like homeodomain 1, embryo sac development arrest 29 |
-0.6 | 0.32 | -0.32 | ||
31 | AT1G69490 | NAC-like, activated by AP3/PI | Arabidopsis NAC domain containing protein 29, NAC-LIKE, ACTIVATED BY AP3/PI, NAC-like, activated by AP3/PI |
-0.6 | 0.31 | -0.29 | ||
32 | AT3G49770 | unknown protein; Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.33 | -0.32 | |||
33 | AT1G09190 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.59 | 0.32 | -0.31 | |||
34 | AT5G63950 | chromatin remodeling 24 | chromatin remodeling 24 | 0.59 | 0.3 | -0.33 | ||
35 | AT5G19130 | GPI transamidase component family protein / Gaa1-like family protein |
0.59 | 0.32 | -0.31 | |||
36 | AT2G16780 | Transducin family protein / WD-40 repeat family protein | MSI02, MULTICOPY SUPPRESSOR OF IRA1 2, NFC02, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2 |
0.59 | 0.31 | -0.33 | ||
37 | AT3G02200 | Proteasome component (PCI) domain protein | 0.59 | 0.32 | -0.32 | |||
38 | AT1G63560 | Receptor-like protein kinase-related family protein | -0.58 | 0.33 | -0.31 | |||
39 | AT3G60790 | F-box family protein | -0.58 | 0.31 | -0.3 | |||
40 | AT5G22460 | alpha/beta-Hydrolases superfamily protein | -0.58 | 0.31 | -0.32 | |||
41 | AT1G74300 | alpha/beta-Hydrolases superfamily protein | -0.58 | 0.32 | -0.33 | |||
42 | AT1G30790 | F-box and associated interaction domains-containing protein | -0.58 | 0.3 | -0.31 | |||
43 | AT5G47560 | tonoplast dicarboxylate transporter | ATSDAT, TONOPLAST DICARBOXYLATE TRANSPORTER, tonoplast dicarboxylate transporter |
-0.58 | 0.33 | -0.32 | ||
44 | AT2G10050 | transposable element gene | -0.57 | 0.32 | -0.33 | |||
45 | AT4G30050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.3 | |||
46 | AT5G53550 | YELLOW STRIPE like 3 | YELLOW STRIPE LIKE 3, YELLOW STRIPE like 3 |
-0.57 | 0.32 | -0.32 | ||
47 | AT5G02200 | far-red-elongated hypocotyl1-like | far-red-elongated hypocotyl1-like | -0.57 | 0.32 | -0.33 | ||
48 | AT1G41900 | transposable element gene | -0.56 | 0.34 | -0.3 | |||
49 | AT5G20710 | beta-galactosidase 7 | beta-galactosidase 7 | -0.54 | 0.31 | -0.33 | ||
50 | AT5G61050 | histone deacetylase-related / HD-related | -0.53 | 0.3 | -0.33 | |||
51 | AT4G16030 | Ribosomal protein L19e family protein | -0.52 | 0.32 | -0.31 | |||
52 | AT5G10420 | MATE efflux family protein | -0.52 | 0.3 | -0.27 | |||
53 | AT1G48220 | Protein kinase superfamily protein | -0.52 | 0.29 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
54 | C0198 | Phosphatidylethanolamine-34:0 | - | - | - | -0.67 | 0.44 | -0.44 |