AT3G02340 : -
Query Information
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AGICode AT3G02340
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02340 RING/U-box superfamily protein 1 0.31 -0.32
2 AT1G24440 RING/U-box superfamily protein 0.75 0.33 -0.3
3 AT3G23620 Ribosomal RNA processing Brix domain protein -0.74 0.31 -0.31
4 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 -0.74 0.33 -0.3
5 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 0.74 0.33 -0.32
6 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE 0.74 0.33 -0.33
7 AT4G23640 Potassium transporter family protein ATKT3, KUP4, TINY ROOT HAIR 1 -0.74 0.31 -0.31
8 AT3G17770 Dihydroxyacetone kinase 0.74 0.34 -0.31
9 AT3G52800 A20/AN1-like zinc finger family protein 0.74 0.32 -0.32
10 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.32 -0.3
11 AT5G02470 Transcription factor DP DPA -0.73 0.3 -0.32
12 AT3G57490 Ribosomal protein S5 family protein -0.73 0.32 -0.33
13 AT3G06780 glycine-rich protein 0.73 0.32 -0.31
14 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 -0.72 0.31 -0.31
15 AT1G19310 RING/U-box superfamily protein 0.72 0.31 -0.33
16 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 -0.72 0.3 -0.32
17 AT1G05840 Eukaryotic aspartyl protease family protein 0.72 0.34 -0.33
18 AT3G16180 Major facilitator superfamily protein -0.72 0.32 -0.3
19 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 -0.72 0.33 -0.33
20 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B 0.72 0.29 -0.35
21 AT5G54720 Ankyrin repeat family protein -0.72 0.29 -0.3
22 AT3G60245 Zinc-binding ribosomal protein family protein -0.72 0.31 -0.32
23 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 -0.72 0.31 -0.31
24 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 0.71 0.32 -0.31
25 AT4G38710 glycine-rich protein -0.71 0.32 -0.33
26 AT2G23320 WRKY DNA-binding protein 15 WRKY DNA-binding protein 15 0.71 0.3 -0.3
27 AT3G13230 RNA-binding KH domain-containing protein -0.71 0.31 -0.32
28 AT5G05230 RING/U-box superfamily protein 0.7 0.31 -0.33
29 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 -0.7 0.32 -0.31
30 AT1G33475 SNARE-like superfamily protein 0.7 0.32 -0.33
31 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f 0.7 0.31 -0.33
32 AT1G19440 3-ketoacyl-CoA synthase 4 3-ketoacyl-CoA synthase 4 -0.7 0.32 -0.31
33 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.7 0.31 -0.3
34 AT5G39960 GTP binding;GTP binding -0.7 0.33 -0.33
35 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE -0.7 0.32 -0.31
36 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.34 -0.3
37 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 -0.69 0.32 -0.32
38 AT5G54910 DEA(D/H)-box RNA helicase family protein -0.69 0.33 -0.32
39 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 -0.69 0.32 -0.32
40 AT3G27230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.32 -0.31
41 AT4G13160 Protein of unknown function, DUF593 0.69 0.32 -0.32
42 AT3G47340 glutamine-dependent asparagine synthase 1 glutamine-dependent asparagine
synthase 1, ARABIDOPSIS THALIANA
GLUTAMINE-DEPENDENT ASPARAGINE
SYNTHASE 1, DARK INDUCIBLE 6		 0.68 0.33 -0.32
43 AT3G23940 dehydratase family -0.68 0.33 -0.29
44 AT3G06380 tubby-like protein 9 tubby-like protein 9, tubby-like
protein 9		 0.68 0.31 -0.32
45 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 -0.68 0.32 -0.3
46 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein 0.68 0.31 -0.31
47 AT4G05610 transposable element gene -0.68 0.32 -0.31
48 AT4G17960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits
to 45 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.3 -0.32
49 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog -0.68 0.31 -0.31
50 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 -0.68 0.32 -0.31
51 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.29 -0.32
52 AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family
protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 -0.68 0.31 -0.31
53 AT1G80440 Galactose oxidase/kelch repeat superfamily protein 0.68 0.34 -0.32
54 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 -0.68 0.3 -0.3
55 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 -0.67 0.3 -0.33
56 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 -0.67 0.3 -0.33
57 AT3G10530 Transducin/WD40 repeat-like superfamily protein -0.67 0.3 -0.31
58 AT1G27290 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.33
59 AT2G22125 binding cellulose synthase-interactive
protein 1, POM-POM 2		 -0.67 0.33 -0.31
60 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 -0.67 0.33 -0.3
61 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 -0.67 0.32 -0.33
62 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 -0.67 0.32 -0.31
63 AT4G34950 Major facilitator superfamily protein -0.67 0.31 -0.32
64 AT2G18900 Transducin/WD40 repeat-like superfamily protein -0.67 0.32 -0.31
65 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 -0.66 0.32 -0.29
66 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 -0.66 0.29 -0.32
67 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 -0.66 0.29 -0.34
68 AT2G29120 glutamate receptor 2.7 glutamate receptor 2.7, GLUTAMATE
RECEPTOR 2.7, glutamate receptor
2.7		 -0.66 0.33 -0.3
69 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 -0.66 0.32 -0.33
70 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 -0.66 0.32 -0.31
71 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.66 0.33 -0.29
72 AT1G48040 Protein phosphatase 2C family protein -0.66 0.32 -0.32
73 AT3G11730 Ras-related small GTP-binding family protein ATFP8, ARABIDOPSIS THALIANA RAB
GTPASE HOMOLOG D1, RAB GTPASE
HOMOLOG D1		 0.66 0.32 -0.32
74 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 0.66 0.34 -0.3
75 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E 0.66 0.31 -0.32
76 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 -0.66 0.33 -0.34
77 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 -0.65 0.32 -0.33
78 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 -0.65 0.3 -0.3
79 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 -0.65 0.31 -0.29
80 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF -0.65 0.3 -0.33
81 AT5G51720 2 iron, 2 sulfur cluster binding -0.65 0.32 -0.32
82 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.65 0.33 -0.29
83 AT5G02180 Transmembrane amino acid transporter family protein -0.65 0.31 -0.31
84 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 -0.65 0.32 -0.31
85 AT1G53510 mitogen-activated protein kinase 18 ARABIDOPSIS THALIANA MAP KINASE
18, mitogen-activated protein
kinase 18		 -0.65 0.33 -0.31
86 AT2G16430 purple acid phosphatase 10 ATPAP10, purple acid phosphatase
10		 -0.65 0.33 -0.29
87 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein -0.65 0.3 -0.31
88 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.65 0.33 -0.31
89 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.65 0.31 -0.3
90 AT5G61990 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.3 -0.31
91 AT2G35620 Leucine-rich repeat protein kinase family protein FEI 2 -0.65 0.31 -0.29
92 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.65 0.32 -0.33
93 AT4G31290 ChaC-like family protein 0.65 0.33 -0.32
94 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.31 -0.31
95 AT4G17486 PPPDE putative thiol peptidase family protein 0.64 0.32 -0.33
96 AT1G48650 DEA(D/H)-box RNA helicase family protein -0.64 0.31 -0.31
97 AT5G40480 embryo defective 3012 embryo defective 3012 -0.64 0.33 -0.35
98 AT1G08410 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.31 -0.32
99 AT1G29470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.32 -0.32
100 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.64 0.3 -0.29
101 AT3G54400 Eukaryotic aspartyl protease family protein -0.64 0.31 -0.32
102 AT1G80000 CASC3/Barentsz eIF4AIII binding -0.64 0.34 -0.33
103 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.64 0.31 -0.33
104 AT5G12310 RING/U-box superfamily protein 0.64 0.33 -0.31
105 AT2G18620 Terpenoid synthases superfamily protein 0.63 0.32 -0.32
106 AT4G36780 BES1/BZR1 homolog 2 BES1/BZR1 homolog 2 0.63 0.31 -0.32
107 AT2G40110 Yippee family putative zinc-binding protein 0.63 0.32 -0.31
108 AT5G55000 potassium channel tetramerisation domain-containing protein
/ pentapeptide repeat-containing protein		 FIP2 0.63 0.32 -0.29
109 AT1G78080 related to AP2 4 related to AP2 4, wound induced
dedifferentiation 1		 0.63 0.31 -0.3
110 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.62 0.32 -0.31
111 AT1G32700 PLATZ transcription factor family protein 0.61 0.32 -0.33
112 AT4G26400 RING/U-box superfamily protein 0.61 0.32 -0.3
113 AT2G29400 type one protein phosphatase 1 PROTEIN PHOSPHATASE 1, type one
protein phosphatase 1		 0.61 0.32 -0.31
114 AT2G46260 BTB/POZ/Kelch-associated protein 0.61 0.31 -0.31
115 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.31 -0.31
116 AT3G20310 ethylene response factor 7 ATERF-7, ATERF7, ethylene response
factor 7		 0.61 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0217 Putative glucosinole - - - -0.82 0.45 -0.46
118 C0026 2-Hydroxyisobutyric acid - - β oxidation 0.67 0.45 -0.44