AT1G76860 : -
Query Information
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AGICode AT1G76860
Description Small nuclear ribonucleoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G76860 Small nuclear ribonucleoprotein family protein 1 0.31 -0.29
2 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG -0.68 0.32 -0.32
3 AT3G03420 Ku70-binding family protein 0.67 0.32 -0.31
4 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).		 0.64 0.32 -0.3
5 AT1G75980 Single hybrid motif superfamily protein 0.64 0.31 -0.29
6 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.64 0.33 -0.3
7 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.63 0.31 -0.32
8 AT2G25780 Protein of unknown function (DUF1677) 0.63 0.31 -0.31
9 AT5G51210 oleosin3 oleosin3 -0.63 0.31 -0.31
10 AT5G58590 RAN binding protein 1 RAN binding protein 1 0.62 0.32 -0.32
11 AT5G09380 RNA polymerase III RPC4 0.62 0.31 -0.32
12 AT3G58180 ARM repeat superfamily protein 0.62 0.32 -0.31
13 AT5G30490 CONTAINS InterPro DOMAIN/s: Craniofacial development
protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast
hits to 324 proteins in 149 species: Archae - 0; Bacteria -
18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0;
Other Eukaryotes - 53 (source: NCBI BLink).		 0.62 0.32 -0.32
14 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.29 -0.32
15 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 -0.61 0.34 -0.32
16 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 -0.6 0.29 -0.3
17 AT2G28330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G08035.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.3
18 AT3G51040 RTE1-homolog RTE1-homolog 0.6 0.31 -0.31
19 AT5G43310 COP1-interacting protein-related -0.6 0.32 -0.28
20 AT1G77140 vacuolar protein sorting 45 ATVPS45, vacuolar protein sorting
45		 0.59 0.31 -0.32
21 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.59 0.3 -0.29
22 AT1G70900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits
to 57 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.33
23 AT3G43740 Leucine-rich repeat (LRR) family protein 0.59 0.3 -0.31
24 AT2G04630 RNA polymerase Rpb6 NRPB6B, NRPE6B 0.58 0.32 -0.31
25 AT2G20460 transposable element gene -0.58 0.3 -0.32
26 AT2G15600 transposable element gene 0.58 0.34 -0.31
27 AT4G10280 RmlC-like cupins superfamily protein 0.57 0.35 -0.31
28 AT5G02030 POX (plant homeobox) family protein BEL1-LIKE HOMEODOMAIN 9,
BELLRINGER, HB-6, LARSON,
PENNYWISE, REPLUMLESS, VAAMANA		 -0.57 0.31 -0.3
29 AT2G13270 transposable element gene -0.57 0.33 -0.31
30 AT5G44180 Homeodomain-like transcriptional regulator -0.56 0.32 -0.32
31 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 -0.56 0.3 -0.33
32 AT1G71980 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.56 0.33 -0.3
33 AT5G28440 unknown protein -0.56 0.31 -0.3
34 AT2G34740 Protein phosphatase 2C family protein -0.56 0.33 -0.33
35 AT4G34840 Phosphorylase superfamily protein ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 2, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
2, METHYLTHIOADENOSINE
NUCLEOSIDASE 2,
methylthioadenosine nucleosidase 2		 0.55 0.33 -0.29
36 AT5G18920 Cox19-like CHCH family protein 0.55 0.32 -0.3
37 AT1G09010 glycoside hydrolase family 2 protein -0.55 0.31 -0.33
38 AT3G12890 activator of spomin::LUC2 activator of spomin::LUC2 0.54 0.32 -0.3
39 AT3G11110 RING/U-box superfamily protein 0.54 0.31 -0.3
40 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 -0.53 0.31 -0.3
41 AT4G31960 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.32 -0.33
42 AT4G25580 CAP160 protein -0.53 0.32 -0.31
43 AT3G04150 RmlC-like cupins superfamily protein -0.53 0.32 -0.31
44 AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D, DYNAMIN-like 1D -0.52 0.31 -0.3
45 AT2G02270 pseudogene, F-box protein (SKP1 interacting partner
3-related), contains similarity to SKP1 interacting partner
3 GI:10716951 from (Arabidopsis thaliana); blastp match of
37% identity and 4.7e-33 P-value to
GP|28812128|dbj|BAC64996.1||AP004461 P0443G08.20 {Oryza
sativa (japonica cultivar-group)}		 ATPP2-B3 -0.52 0.3 -0.3
46 AT3G60030 squamosa promoter-binding protein-like 12 squamosa promoter-binding
protein-like 12		 -0.52 0.33 -0.3
47 AT3G58790 galacturonosyltransferase 15 galacturonosyltransferase 15 -0.52 0.3 -0.31
48 AT2G23240 Plant EC metallothionein-like protein, family 15 Arabidopsis thaliana
metallothionein 4b		 -0.52 0.33 -0.29
49 AT1G65380 Leucine-rich repeat (LRR) family protein Receptor Like Protein 10, clavata
2		 -0.51 0.29 -0.32
50 AT3G04750 Tetratricopeptide repeat (TPR)-like superfamily protein -0.51 0.3 -0.31
51 AT3G60240 eukaryotic translation initiation factor 4G CUCUMOVIRUS MULTIPLICATION 2,
eukaryotic translation initiation
factor 4G		 -0.51 0.31 -0.31
52 AT3G09370 myb domain protein 3r-3 myb domain protein 3R3, myb domain
protein 3r-3		 -0.51 0.33 -0.32
53 AT5G55910 D6 protein kinase D6 protein kinase -0.51 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
54 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.63 0.45 -0.43
55 C0062 Betain - - - -0.52 0.31 -0.34