AGICode | AT3G06120 |
Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G06120 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
MUTE | 1 | 0.32 | -0.3 | ||
2 | AT1G80080 | Leucine-rich repeat (LRR) family protein | Receptor Like Protein 17, TOO MANY MOUTHS |
0.75 | 0.31 | -0.29 | ||
3 | AT2G36250 | Tubulin/FtsZ family protein | ATFTSZ2-1, FTSZ2-1 | 0.74 | 0.32 | -0.3 | ||
4 | AT1G63310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.35 | -0.33 | |||
5 | AT3G10620 | nudix hydrolase homolog 26 | nudix hydrolase homolog 26, nudix hydrolase homolog 26 |
0.71 | 0.3 | -0.29 | ||
6 | AT2G29750 | UDP-glucosyl transferase 71C1 | UDP-glucosyl transferase 71C1 | -0.71 | 0.32 | -0.35 | ||
7 | AT2G47260 | WRKY DNA-binding protein 23 | WRKY DNA-BINDING PROTEIN 23, WRKY DNA-binding protein 23 |
-0.71 | 0.31 | -0.33 | ||
8 | AT3G20570 | early nodulin-like protein 9 | AtENODL9, early nodulin-like protein 9 |
0.7 | 0.29 | -0.32 | ||
9 | AT3G26550 | Cysteine/Histidine-rich C1 domain family protein | -0.7 | 0.34 | -0.32 | |||
10 | AT5G19580 | glyoxal oxidase-related protein | 0.7 | 0.31 | -0.31 | |||
11 | AT1G67280 | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein |
0.7 | 0.29 | -0.3 | |||
12 | AT5G23940 | HXXXD-type acyl-transferase family protein | DEFECTIVE IN CUTICULAR RIDGES, EMBRYO DEFECTIVE 3009, PERMEABLE LEAVES3 |
0.7 | 0.33 | -0.3 | ||
13 | AT3G25930 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.7 | 0.33 | -0.3 | |||
14 | AT1G27070 | 5'-AMP-activated protein kinase-related | 0.69 | 0.31 | -0.31 | |||
15 | AT2G27140 | HSP20-like chaperones superfamily protein | 0.69 | 0.31 | -0.33 | |||
16 | AT1G15640 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15620.1); Has 154 Blast hits to 146 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.3 | -0.3 | |||
17 | AT2G39370 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
MEMBRANE-ASSOCIATED KINASE REGULATOR 4 |
-0.69 | 0.35 | -0.31 | ||
18 | AT5G65210 | bZIP transcription factor family protein | TGA1 | -0.68 | 0.31 | -0.32 | ||
19 | AT4G14910 | HISTIDINE BIOSYNTHESIS 5B | HISTIDINE BIOSYNTHESIS 5B | 0.68 | 0.31 | -0.32 | ||
20 | AT1G64405 | unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.28 | -0.31 | |||
21 | AT2G32610 | cellulose synthase-like B1 | cellulose synthase-like B1, CELLULOSE SYNTHASE LIKE B1, CELLULOSE SYNTHASE LIKE B1, cellulose synthase-like B1 |
-0.68 | 0.33 | -0.31 | ||
22 | AT2G04025 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 3 | -0.68 | 0.31 | -0.33 | ||
23 | AT2G46200 | unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink). |
-0.67 | 0.3 | -0.32 | |||
24 | AT4G23990 | cellulose synthase like G3 | ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE G3, cellulose synthase like G3 |
0.67 | 0.32 | -0.33 | ||
25 | AT3G45730 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.31 | -0.32 | |||
26 | AT2G23760 | BEL1-like homeodomain 4 | BEL1-like homeodomain 4, SAWTOOTH 2 |
0.67 | 0.34 | -0.29 | ||
27 | AT5G52170 | homeodomain GLABROUS 7 | homeodomain GLABROUS 7 | -0.66 | 0.31 | -0.33 | ||
28 | AT4G03860 | transposable element gene | 0.66 | 0.31 | -0.31 | |||
29 | AT4G31910 | HXXXD-type acyl-transferase family protein | -0.66 | 0.3 | -0.31 | |||
30 | AT1G34750 | Protein phosphatase 2C family protein | -0.66 | 0.3 | -0.3 | |||
31 | AT2G36210 | SAUR-like auxin-responsive protein family | -0.65 | 0.32 | -0.31 | |||
32 | AT1G59750 | auxin response factor 1 | auxin response factor 1 | 0.65 | 0.32 | -0.31 | ||
33 | AT5G42180 | Peroxidase superfamily protein | peroxidase 64 | -0.65 | 0.31 | -0.3 | ||
34 | AT4G22510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, leaf; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.64 | 0.33 | -0.3 | |||
35 | AT5G39820 | NAC domain containing protein 94 | NAC domain containing protein 94, NAC domain containing protein 94 |
-0.64 | 0.33 | -0.31 | ||
36 | AT2G28690 | Protein of unknown function (DUF1635) | -0.64 | 0.3 | -0.28 | |||
37 | AT1G69690 | TCP family transcription factor | AtTCP15, TEOSINTE BRANCHED1/CYCLOIDEA/PCF 15 |
0.64 | 0.31 | -0.32 | ||
38 | AT5G62340 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.64 | 0.31 | -0.32 | |||
39 | AT3G16440 | myrosinase-binding protein-like protein-300B | myrosinase-binding protein-like protein-300B, maternal effect embryo arrest 36, myrosinase-binding protein-like protein-300B |
-0.64 | 0.32 | -0.29 | ||
40 | AT1G77330 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.64 | 0.36 | -0.32 | |||
41 | AT3G62760 | Glutathione S-transferase family protein | ATGSTF13 | -0.64 | 0.32 | -0.33 | ||
42 | AT1G48510 | Surfeit locus 1 cytochrome c oxidase biogenesis protein | -0.63 | 0.31 | -0.34 | |||
43 | AT5G40100 | Disease resistance protein (TIR-NBS-LRR class) family | -0.63 | 0.34 | -0.32 | |||
44 | AT5G54855 | Pollen Ole e 1 allergen and extensin family protein | 0.63 | 0.32 | -0.32 | |||
45 | AT1G33860 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.63 | 0.33 | -0.34 | |||
46 | AT5G45540 | Protein of unknown function (DUF594) | 0.63 | 0.33 | -0.3 | |||
47 | AT1G62800 | aspartate aminotransferase 4 | aspartate aminotransferase 4 | -0.62 | 0.31 | -0.31 | ||
48 | AT3G07940 | Calcium-dependent ARF-type GTPase activating protein family | 0.62 | 0.31 | -0.29 | |||
49 | AT1G21310 | extensin 3 | extensin 3, extensin 3, ROOT-SHOOT-HYPOCOTYL DEFECTIVE |
-0.62 | 0.32 | -0.31 | ||
50 | AT3G20960 | cytochrome P450, family 705, subfamily A, polypeptide 33 | cytochrome P450, family 705, subfamily A, polypeptide 33 |
-0.62 | 0.33 | -0.32 | ||
51 | AT1G80240 | Protein of unknown function, DUF642 | -0.61 | 0.32 | -0.31 | |||
52 | AT4G22490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.61 | 0.32 | -0.32 | |||
53 | AT3G11490 | rac GTPase activating protein | 0.61 | 0.31 | -0.32 | |||
54 | AT5G36250 | Protein phosphatase 2C family protein | 0.61 | 0.32 | -0.32 | |||
55 | AT1G74110 | cytochrome P450, family 78, subfamily A, polypeptide 10 | cytochrome P450, family 78, subfamily A, polypeptide 10 |
-0.61 | 0.31 | -0.31 | ||
56 | AT3G62270 | HCO3- transporter family | -0.61 | 0.32 | -0.31 | |||
57 | AT4G00080 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
unfertilized embryo sac 11 | -0.61 | 0.31 | -0.33 | ||
58 | AT5G14150 | Protein of unknown function, DUF642 | -0.61 | 0.31 | -0.3 | |||
59 | AT3G48410 | alpha/beta-Hydrolases superfamily protein | -0.61 | 0.3 | -0.3 | |||
60 | AT1G55610 | BRI1 like | BRI1 like | -0.61 | 0.32 | -0.3 | ||
61 | AT2G12230 | pseudogene, C-1-tetrahydrofolate synthase, blastp match of 91% identity and 2.9e-07 P-value to GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel protein similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC 3.5.4.9, EC-TRUNCATED- |
-0.61 | 0.32 | -0.3 | |||
62 | AT3G45510 | RING/U-box protein | 0.61 | 0.29 | -0.3 | |||
63 | AT3G56700 | fatty acid reductase 6 | AtFAR6, fatty acid reductase 6 | 0.6 | 0.34 | -0.32 | ||
64 | AT1G64480 | calcineurin B-like protein 8 | calcineurin B-like protein 8 | -0.6 | 0.29 | -0.31 | ||
65 | AT5G51670 | Protein of unknown function (DUF668) | -0.6 | 0.32 | -0.31 | |||
66 | AT5G10620 | methyltransferases | 0.6 | 0.32 | -0.32 | |||
67 | AT4G05330 | ARF-GAP domain 13 | ARF-GAP domain 13 | 0.6 | 0.3 | -0.29 | ||
68 | AT2G32620 | cellulose synthase-like B | cellulose synthase-like B, CELLULOSE SYNTHASE LIKE B2, CELLULOSE SYNTHASE LIKE B2, cellulose synthase-like B |
-0.6 | 0.31 | -0.3 | ||
69 | AT5G43780 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
APS4 | -0.59 | 0.31 | -0.32 | ||
70 | AT1G62070 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 8 Blast hits to 8 proteins in 4 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.29 | -0.31 | |||
71 | AT2G25810 | tonoplast intrinsic protein 4;1 | tonoplast intrinsic protein 4;1 | -0.59 | 0.33 | -0.34 | ||
72 | AT2G20210 | RNI-like superfamily protein | 0.58 | 0.33 | -0.29 | |||
73 | AT5G62940 | Dof-type zinc finger DNA-binding family protein | DNA BINDING WITH ONE FINGER 5.6, HIGH CAMBIAL ACTIVITY2 |
0.58 | 0.31 | -0.31 | ||
74 | AT3G46500 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.58 | 0.33 | -0.32 | |||
75 | AT1G31300 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein |
0.58 | 0.33 | -0.32 | |||
76 | AT3G20100 | cytochrome P450, family 705, subfamily A, polypeptide 19 | cytochrome P450, family 705, subfamily A, polypeptide 19 |
-0.58 | 0.35 | -0.3 | ||
77 | AT4G31750 | HOPW1-1-interacting 2 | HOPW1-1-interacting 2 | -0.58 | 0.33 | -0.32 | ||
78 | AT3G01070 | early nodulin-like protein 16 | AtENODL16, early nodulin-like protein 16 |
-0.58 | 0.31 | -0.31 | ||
79 | AT1G19620 | unknown protein; Has 44 Blast hits to 24 proteins in 12 species: Archae - 0; Bacteria - 8; Metazoa - 22; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.58 | 0.33 | -0.33 | |||
80 | AT4G34320 | Protein of unknown function (DUF677) | -0.58 | 0.32 | -0.3 | |||
81 | AT3G18260 | Reticulon family protein | 0.58 | 0.33 | -0.34 | |||
82 | AT4G10350 | NAC domain containing protein 70 | NAC domain containing protein 70, BEARSKIN 2, NAC domain containing protein 70 |
-0.58 | 0.33 | -0.33 | ||
83 | AT4G16140 | proline-rich family protein | 0.58 | 0.31 | -0.28 | |||
84 | AT2G35920 | RNA helicase family protein | -0.57 | 0.31 | -0.31 | |||
85 | AT5G59780 | myb domain protein 59 | MYB DOMAIN PROTEIN 59, ATMYB59-1, ATMYB59-2, ATMYB59-3, myb domain protein 59 |
-0.57 | 0.3 | -0.29 | ||
86 | AT3G13650 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.57 | 0.33 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
87 | C0082 | Digalactosyldiacylglycerol-36:3 | - | Digalactosyldiacylglycerol-36:3 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.79 | 0.47 | -0.46 | ||
88 | C0172 | MST_2214.3 | - | - | - | 0.67 | 0.47 | -0.47 | ||
89 | C0233 | Sinapinic acid | - | cis-Sinapinate; Sinapate | ferulate and sinapate biosynthesis, sinapate ester biosynthesis, free phenylpropanoid acid biosynthesis |
0.65 | 0.46 | -0.45 | ||
90 | C0248 | Sulfoquinovosyldiacylglycerol-36:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.65 | 0.48 | -0.47 | ||
91 | C0200 | Phosphatidylglycerol-32:0 | - | Phosphatidylglycerol-32:0 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
0.63 | 0.33 | -0.32 |