AT3G11100 : -
Query Information
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AGICode AT3G11100
Description sequence-specific DNA binding transcription factors
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G11100 sequence-specific DNA binding transcription factors 1 0.33 -0.34
2 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C 0.86 0.31 -0.3
3 AT1G68140 Protein of unknown function (DUF1644) 0.83 0.35 -0.37
4 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.83 0.3 -0.34
5 AT1G45150 unknown protein; Has 219 Blast hits to 202 proteins in 78
species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi -
0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source:
NCBI BLink).		 0.82 0.31 -0.32
6 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 -0.82 0.29 -0.32
7 AT5G57910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.81 0.32 -0.34
8 AT5G19920 Transducin/WD40 repeat-like superfamily protein -0.81 0.33 -0.32
9 AT3G23490 cyanase cyanase 0.81 0.31 -0.29
10 AT4G29060 elongation factor Ts family protein embryo defective 2726 -0.8 0.31 -0.29
11 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.8 0.3 -0.3
12 AT4G30000 Dihydropterin pyrophosphokinase / Dihydropteroate synthase -0.8 0.32 -0.31
13 AT2G22690 zinc ion binding 0.8 0.31 -0.3
14 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 0.8 0.31 -0.31
15 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 0.79 0.34 -0.31
16 AT4G00370 Major facilitator superfamily protein ANTR2, anion transporter 2 -0.79 0.3 -0.31
17 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 -0.79 0.3 -0.31
18 AT1G17220 Translation initiation factor 2, small GTP-binding protein fu-gaeri1 -0.79 0.32 -0.33
19 AT2G38400 alanine:glyoxylate aminotransferase 3 alanine:glyoxylate
aminotransferase 3		 0.79 0.32 -0.31
20 AT4G29420 F-box/RNI-like superfamily protein 0.79 0.34 -0.32
21 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 0.79 0.32 -0.32
22 AT3G06980 DEA(D/H)-box RNA helicase family protein -0.79 0.31 -0.29
23 AT1G52530 CONTAINS InterPro DOMAIN/s: Hus1-like protein
(InterPro:IPR007150); Has 129 Blast hits to 128 proteins in
49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi -
10; Plants - 47; Viruses - 0; Other Eukaryotes - 15
(source: NCBI BLink).		 -0.79 0.32 -0.31
24 AT3G11580 AP2/B3-like transcriptional factor family protein 0.78 0.3 -0.32
25 AT2G41940 zinc finger protein 8 zinc finger protein 8 -0.78 0.34 -0.32
26 AT3G53940 Mitochondrial substrate carrier family protein -0.78 0.32 -0.32
27 AT4G33940 RING/U-box superfamily protein 0.78 0.31 -0.31
28 AT2G05630 Ubiquitin-like superfamily protein ATG8D 0.78 0.33 -0.33
29 AT5G06370 NC domain-containing protein-related 0.78 0.31 -0.31
30 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.33 -0.33
31 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.31 -0.31
32 AT1G26540 Agenet domain-containing protein -0.77 0.32 -0.29
33 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 -0.76 0.31 -0.33
34 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 0.76 0.31 -0.32
35 AT3G42660 transducin family protein / WD-40 repeat family protein -0.76 0.31 -0.32
36 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 -0.76 0.33 -0.31
37 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.76 0.29 -0.34
38 AT1G26690 emp24/gp25L/p24 family/GOLD family protein 0.76 0.33 -0.32
39 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.76 0.35 -0.33
40 AT4G29750 CRS1 / YhbY (CRM) domain-containing protein -0.75 0.32 -0.34
41 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 -0.75 0.3 -0.32
42 AT5G37040 F-box family protein -0.75 0.31 -0.3
43 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 -0.75 0.32 -0.31
44 AT4G01610 Cysteine proteinases superfamily protein 0.75 0.3 -0.31
45 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 0.75 0.32 -0.31
46 AT5G41670 6-phosphogluconate dehydrogenase family protein -0.75 0.32 -0.31
47 AT1G67630 DNA polymerase alpha 2 EMBRYO DEFECTIVE 2814, DNA
polymerase alpha 2		 -0.75 0.35 -0.31
48 AT1G06800 alpha/beta-Hydrolases superfamily protein phospholipase A I gamma 1 0.75 0.32 -0.32
49 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein -0.75 0.3 -0.31
50 AT3G16560 Protein phosphatase 2C family protein -0.75 0.31 -0.3
51 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 -0.74 0.3 -0.3
52 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 0.74 0.32 -0.32
53 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 -0.74 0.31 -0.32
54 AT5G11490 adaptin family protein -0.74 0.3 -0.31
55 AT2G26080 glycine decarboxylase P-protein 2 glycine decarboxylase P-protein 2,
glycine decarboxylase P-protein 2		 -0.74 0.32 -0.32
56 AT1G45145 thioredoxin H-type 5 THIOREDOXIN H-TYPE 5, thioredoxin
H-type 5, LOCUS OF INSENSITIVITY
TO VICTORIN 1, thioredoxin H-type
5		 0.74 0.32 -0.32
57 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 -0.74 0.33 -0.31
58 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 -0.74 0.32 -0.32
59 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.31 -0.33
60 AT1G19270 DA1 DA1 0.74 0.31 -0.3
61 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein -0.74 0.3 -0.31
62 AT3G20260 Protein of unknown function (DUF1666) -0.74 0.32 -0.31
63 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 -0.74 0.3 -0.32
64 AT2G01540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.74 0.32 -0.33
65 AT3G06760 Drought-responsive family protein 0.73 0.3 -0.32
66 AT5G10470 kinesin like protein for actin based chloroplast movement 1 kinesin like protein for actin
based chloroplast movement 1,
KINESIN CDKA;1 ASSOCIATED 1		 -0.73 0.31 -0.32
67 AT4G14340 casein kinase I casein kinase I, CASEIN KINASE
I-LIKE 11		 0.73 0.31 -0.31
68 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 -0.73 0.34 -0.31
69 AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase -0.73 0.32 -0.32
70 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 0.73 0.33 -0.32
71 AT5G42480 Chaperone DnaJ-domain superfamily protein ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 6		 -0.73 0.33 -0.34
72 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein -0.73 0.33 -0.31
73 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 -0.73 0.32 -0.32
74 AT5G46580 pentatricopeptide (PPR) repeat-containing protein -0.73 0.31 -0.32
75 AT5G52010 C2H2-like zinc finger protein -0.72 0.32 -0.31
76 AT3G24230 Pectate lyase family protein -0.72 0.3 -0.3
77 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 0.72 0.31 -0.33
78 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein 0.72 0.31 -0.31
79 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 -0.72 0.32 -0.31
80 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 -0.72 0.31 -0.32
81 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.32
82 AT3G16260 tRNAse Z4 tRNAse Z4 -0.72 0.3 -0.32
83 AT3G01400 ARM repeat superfamily protein 0.72 0.32 -0.33
84 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 0.72 0.32 -0.31
85 AT2G29890 villin-like 1 ATVLN1, villin 1 -0.72 0.29 -0.32
86 AT5G59680 Leucine-rich repeat protein kinase family protein -0.72 0.33 -0.32
87 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 -0.72 0.32 -0.33
88 AT1G79080 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.3 -0.31
89 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein -0.72 0.32 -0.33
90 AT2G01710 Chaperone DnaJ-domain superfamily protein 0.72 0.33 -0.33
91 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 -0.72 0.32 -0.31
92 AT2G14880 SWIB/MDM2 domain superfamily protein -0.72 0.31 -0.32
93 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1		 -0.72 0.31 -0.32
94 AT4G15955 alpha/beta-Hydrolases superfamily protein 0.72 0.3 -0.35
95 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 -0.71 0.34 -0.32
96 AT1G76800 Vacuolar iron transporter (VIT) family protein -0.71 0.31 -0.35
97 AT3G01740 Mitochondrial ribosomal protein L37 0.71 0.29 -0.31
98 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 -0.71 0.31 -0.3
99 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 -0.71 0.34 -0.33
100 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.32 -0.33
101 AT2G26050 Protein of unknown function (DUF1644) -0.71 0.31 -0.32
102 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 0.71 0.34 -0.32
103 AT4G27620 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27610.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.71 0.3 -0.32
104 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.31 -0.33
105 AT5G38460 ALG6, ALG8 glycosyltransferase family -0.71 0.3 -0.31
106 AT1G06630 F-box/RNI-like superfamily protein 0.71 0.32 -0.33
107 AT5G11590 Integrase-type DNA-binding superfamily protein TINY2 -0.71 0.33 -0.31
108 AT3G13820 F-box and associated interaction domains-containing protein -0.71 0.34 -0.32
109 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.31 -0.31
110 AT5G07900 Mitochondrial transcription termination factor family
protein		 -0.71 0.31 -0.32
111 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 -0.71 0.31 -0.32
112 AT5G15760 Ribosomal protein PSRP-3/Ycf65 -0.71 0.3 -0.29
113 AT3G52090 DNA-directed RNA polymerase, RBP11-like ATRPB13.6, NRPB11, NRPD11, NRPE11 0.71 0.34 -0.29
114 AT5G20980 methionine synthase 3 methionine synthase 3, methionine
synthase 3		 -0.71 0.31 -0.31
115 AT1G17930 Aminotransferase-like, plant mobile domain family protein 0.71 0.3 -0.29
116 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 -0.71 0.3 -0.34
117 AT1G69200 fructokinase-like 2 fructokinase-like 2 -0.71 0.32 -0.31
118 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 0.71 0.33 -0.32
119 AT5G35490 mto 1 responding up 1 ARABIDOPSIS MTO 1 RESPONDING UP 1,
MTO 1 RESPONDING UP 1		 -0.71 0.31 -0.3