AT1G32540 : lsd one like 1
Query Information
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AGICode AT1G32540
Description lsd one like 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G32540 lsd one like 1 lsd one like 1 1 0.3 -0.31
2 AT5G61410 D-ribulose-5-phosphate-3-epimerase EMBRYO DEFECTIVE 2728,
D-ribulose-5-phosphate-3-epimerase		 0.77 0.3 -0.34
3 AT1G75010 GTP binding ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 3		 0.73 0.31 -0.31
4 AT4G35440 chloride channel E ATCLC-E, chloride channel E,
CHLORIDE CHANNEL E		 0.73 0.31 -0.34
5 AT5G24970 Protein kinase superfamily protein 0.71 0.31 -0.32
6 AT1G01110 IQ-domain 18 IQ-domain 18 -0.7 0.29 -0.33
7 ATCG00630 PSAJ PSAJ 0.69 0.31 -0.33
8 AT5G51010 Rubredoxin-like superfamily protein 0.68 0.29 -0.3
9 AT3G46130 myb domain protein 48 myb domain protein 48, ATMYB48-1,
ATMYB48-2, ATMYB48-3, myb domain
protein 48		 0.68 0.3 -0.32
10 AT3G57770 Protein kinase superfamily protein 0.67 0.32 -0.32
11 AT3G06230 MAP kinase kinase 8 MAP kinase kinase 8, MAP kinase
kinase 8		 0.67 0.32 -0.3
12 AT1G17100 SOUL heme-binding family protein 0.67 0.33 -0.32
13 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 0.67 0.33 -0.33
14 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.67 0.32 -0.3
15 AT3G55080 SET domain-containing protein 0.67 0.3 -0.32
16 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.32 -0.3
17 AT1G15290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.31 -0.31
18 AT3G55050 Protein phosphatase 2C family protein 0.66 0.32 -0.29
19 AT2G38590 F-box and associated interaction domains-containing protein 0.66 0.34 -0.3
20 AT1G60160 Potassium transporter family protein 0.66 0.28 -0.31
21 AT1G29120 Hydrolase-like protein family 0.65 0.32 -0.3
22 AT2G47010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.65 0.31 -0.31
23 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A -0.65 0.31 -0.32
24 AT3G13226 regulatory protein RecX family protein 0.65 0.33 -0.32
25 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein 0.65 0.3 -0.32
26 AT1G74650 myb domain protein 31 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 31, ATY13, myb domain
protein 31		 0.65 0.31 -0.32
27 AT3G61700 Plant protein 1589 of unknown function 0.65 0.33 -0.32
28 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.64 0.31 -0.31
29 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 0.64 0.31 -0.31
30 AT5G02480 HSP20-like chaperones superfamily protein 0.64 0.3 -0.29
31 AT5G47280 ADR1-like 3 ADR1-like 3 0.64 0.3 -0.32
32 AT2G46140 Late embryogenesis abundant protein -0.64 0.31 -0.34
33 AT2G10900 transposable element gene 0.64 0.3 -0.31
34 AT2G18790 phytochrome B HY3, OUT OF PHASE 1, phytochrome B 0.63 0.33 -0.3
35 AT3G63470 serine carboxypeptidase-like 40 serine carboxypeptidase-like 40 -0.63 0.31 -0.33
36 AT4G37400 cytochrome P450, family 81, subfamily F, polypeptide 3 cytochrome P450, family 81,
subfamily F, polypeptide 3		 -0.63 0.3 -0.32
37 AT1G49630 presequence protease 2 presequence protease 2,
presequence protease 2		 0.63 0.31 -0.3
38 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.63 0.29 -0.32
39 AT5G09430 alpha/beta-Hydrolases superfamily protein -0.62 0.31 -0.34
40 ATMG00870 hypothetical protein ORF184 -0.62 0.32 -0.32
41 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 -0.62 0.3 -0.31
42 AT1G19220 auxin response factor 19 AUXIN RESPONSE FACTOR11, auxin
response factor 19,
indole-3-acetic acid inducible 22		 -0.61 0.3 -0.33
43 AT4G11820 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /
3-hydroxy-3-methylglutaryl coenzyme A synthase		 FLAKY POLLEN 1,
HYDROXYMETHYLGLUTARYL-COA
SYNTHASE, MVA1		 -0.61 0.31 -0.3
44 AT5G65530 Protein kinase superfamily protein -0.61 0.3 -0.32
45 AT2G03730 ACT domain repeat 5 ACT domain repeat 5 -0.6 0.33 -0.31
46 AT2G42660 Homeodomain-like superfamily protein -0.6 0.33 -0.3
47 AT4G13130 Cysteine/Histidine-rich C1 domain family protein -0.59 0.32 -0.33
48 AT4G15120 VQ motif-containing protein -0.59 0.31 -0.34
49 AT1G27140 glutathione S-transferase tau 14 glutathione S-transferase tau 14,
GLUTATHIONE S-TRANSFERASE 13,
glutathione S-transferase tau 14		 -0.59 0.32 -0.33
50 AT3G27440 uridine kinase-like 5 uridine kinase-like 5 -0.58 0.31 -0.31
51 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.58 0.31 -0.32
52 AT5G58500 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 5 -0.58 0.32 -0.32
53 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.57 0.3 -0.3
54 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.57 0.31 -0.3
55 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 -0.57 0.32 -0.31
56 AT1G66470 ROOT HAIR DEFECTIVE6 AtRHD6, ROOT HAIR DEFECTIVE6 -0.56 0.3 -0.31
57 AT3G48450 RPM1-interacting protein 4 (RIN4) family protein -0.56 0.3 -0.32
58 AT4G11700 Protein of unknown function (DUF626) -0.56 0.3 -0.33
59 AT5G15890 TRICHOME BIREFRINGENCE-LIKE 21 TRICHOME BIREFRINGENCE-LIKE 21 -0.56 0.31 -0.29
60 AT4G11190 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.55 0.31 -0.3
61 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.55 0.31 -0.32
62 AT2G21060 glycine-rich protein 2B COLD SHOCK DOMAIN PROTEIN 4,
glycine-rich protein 2B,
glycine-rich protein 2B		 -0.54 0.31 -0.3
63 AT3G50120 Plant protein of unknown function (DUF247) -0.54 0.3 -0.33
64 AT1G73150 global transcription factor group E3 global transcription factor group
E3		 -0.53 0.32 -0.29
65 AT3G43970 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (DUF295)
(TAIR:AT5G53240.1); Has 56 Blast hits to 56 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.32 -0.31
66 AT3G03410 EF hand calcium-binding protein family -0.53 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.79 0.47 -0.42 C0051
68 C0090 Fructose D-(-)-Fructose D-Fructose sorbitol degradation I,
fructan degradation 		-0.58 0.32 -0.32 C0090