AT1G42570 : -
Query Information
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AGICode AT1G42570
Description pseudogene, similar to P0529E05.9, blastp match of 56% identity and 1.2e-110 P-value to GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza sativa (japonica cultivar-group)}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 1 0.31 -0.32
2 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 0.63 0.3 -0.31
3 AT4G28140 Integrase-type DNA-binding superfamily protein 0.62 0.32 -0.35
4 AT3G45670 Protein kinase superfamily protein 0.62 0.3 -0.28
5 AT1G23750 Nucleic acid-binding, OB-fold-like protein -0.6 0.31 -0.33
6 AT1G61400 S-locus lectin protein kinase family protein 0.6 0.33 -0.3
7 AT5G28620 protein kinase C-related -0.6 0.32 -0.31
8 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 -0.6 0.31 -0.3
9 AT2G32050 Family of unknown function (DUF572) 0.59 0.29 -0.3
10 AT3G47460 Structural maintenance of chromosomes (SMC) family protein ATSMC2 0.59 0.3 -0.31
11 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 -0.58 0.3 -0.34
12 AT3G30846 transposable element gene -0.58 0.31 -0.31
13 AT5G45980 WUSCHEL related homeobox 8 STIMPY-LIKE, WUSCHEL related
homeobox 8, WUSCHEL related
homeobox 9B		 0.58 0.31 -0.32
14 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.58 0.31 -0.3
15 AT3G47440 tonoplast intrinsic protein 5;1 tonoplast intrinsic protein 5;1 -0.58 0.29 -0.31
16 AT1G08065 alpha carbonic anhydrase 5 alpha carbonic anhydrase 5, ALPHA
CARBONIC ANHYDRASE 5		 0.57 0.31 -0.32
17 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 -0.57 0.32 -0.33
18 AT1G04650 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.32 -0.32
19 AT3G30510 transposable element gene -0.57 0.33 -0.31
20 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 0.57 0.28 -0.32
21 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.56 0.32 -0.31
22 AT5G14560 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.3
23 AT3G56740 Ubiquitin-associated (UBA) protein -0.56 0.3 -0.32
24 AT1G71450 Integrase-type DNA-binding superfamily protein 0.56 0.32 -0.32
25 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.56 0.31 -0.32
26 AT3G43060 transposable element gene -0.55 0.32 -0.31
27 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein -0.55 0.28 -0.31
28 AT3G42670 chromatin remodeling 38 chromatin remodeling 38, CLASSY1,
CLASSY 1		 0.54 0.3 -0.32
29 AT4G14810 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.54 0.29 -0.32
30 AT1G47885 Ribonuclease inhibitor 0.54 0.33 -0.31
31 AT3G08670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast
hits to 29827 proteins in 1356 species: Archae - 46;
Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants -
2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI
BLink).		 0.54 0.33 -0.32
32 AT2G03740 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.54 0.32 -0.3
33 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.54 0.3 -0.32
34 AT3G31410 transposable element gene 0.54 0.31 -0.32
35 AT3G28390 P-glycoprotein 18 ATP-binding cassette B18,
P-glycoprotein 18		 0.53 0.3 -0.32
36 AT4G10460 transposable element gene 0.53 0.3 -0.32
37 AT1G74350 Intron maturase, type II family protein 0.53 0.32 -0.31
38 AT5G16560 Homeodomain-like superfamily protein KANADI, KANADI 1 -0.53 0.31 -0.31
39 AT5G28940 transposable element gene 0.52 0.33 -0.31
40 AT5G49790 transposable element gene -0.52 0.3 -0.32
41 AT3G32180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32160.1); Has 37 Blast hits
to 25 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.34 -0.34
42 AT1G20500 AMP-dependent synthetase and ligase family protein 0.51 0.35 -0.31
43 AT5G45220 Disease resistance protein (TIR-NBS-LRR class) family -0.5 0.33 -0.32
44 AT3G45380 transposable element gene -0.5 0.3 -0.33
45 AT4G27580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, cell wall; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.49 0.31 -0.33
46 AT2G23440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 25 Blast hits
to 25 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.48 0.3 -0.29
47 AT3G03260 homeodomain GLABROUS 8 homeodomain GLABROUS 8 -0.47 0.3 -0.34
48 AT1G76220 Arabidopsis protein of unknown function (DUF241) -0.47 0.33 -0.3
49 AT5G44140 prohibitin 7 prohibitin 7, prohibitin 7 -0.47 0.32 -0.31
50 AT1G79860 RHO guanyl-nucleotide exchange factor 12 ATROPGEF12, MATERNAL EFFECT EMBRYO
ARREST 64, RHO guanyl-nucleotide
exchange factor 12		 -0.46 0.31 -0.3
51 AT4G00770 unknown protein; Has 127 Blast hits to 120 proteins in 33
species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8;
Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source:
NCBI BLink).		 -0.46 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
52 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.68 0.47 -0.42 C0018
53 C0102 Glutamine D,L-Glutamine L-Glutamine ammonia assimilation cycle II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
tetrahydrofolate biosynthesis II,
NAD biosynthesis I (from aspartate),
nitrate reduction II (assimilatory),
5-aminoimidazole ribonucleotide biosynthesis I,
citrulline biosynthesis,
pyrimidine ribonucleotides interconversion,
histidine biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
pyridoxal 5'-phosphate biosynthesis II,
arginine biosynthesis I,
UDP-N-acetyl-D-glucosamine biosynthesis II,
pyridine nucleotide cycling (plants),
glutamate biosynthesis IV,
glutamine biosynthesis III,
glutamate biosynthesis V,
asparagine biosynthesis III (tRNA-dependent),
tryptophan biosynthesis,
L-glutamine biosynthesis II (tRNA-dependent),
uridine-5'-phosphate biosynthesis,
tRNA charging,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
asparagine biosynthesis I 		-0.47 0.33 -0.34 C0102
54 C0114 Homocystine L-Homocystine - - -0.46 0.31 -0.32